EMLSAT00000006721, EMLSAT00000006721-702568 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006721
Unique NameEMLSAT00000006721-702568
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3744supercontigLSalAtl2s3744:4942..7079 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006721 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006721EMLSAG00000006721-689487Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029483EMLSAE00000029483-738411Lepeophtheirus salmonisexon
EMLSAE00000029484EMLSAE00000029484-738412Lepeophtheirus salmonisexon
EMLSAE00000029485EMLSAE00000029485-738413Lepeophtheirus salmonisexon
EMLSAE00000029486EMLSAE00000029486-738414Lepeophtheirus salmonisexon
EMLSAE00000029487EMLSAE00000029487-738415Lepeophtheirus salmonisexon
EMLSAE00000029488EMLSAE00000029488-738416Lepeophtheirus salmonisexon
EMLSAE00000029489EMLSAE00000029489-738417Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768538auto768538Lepeophtheirus salmonispolypeptide
EMLSAP00000006721EMLSAP00000006721Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006721

>EMLSAP00000006721 ID=EMLSAP00000006721|Name=EMLSAP00000006721|organism=Lepeophtheirus salmonis|type=polypeptide|length=388bp
MSEAGGAASAIVGATSAAQEKLPQNNGEGTSAGVVEGAESLGTSEIVRGQ
IFNCKPRYVNLQYIGEGAYGMVVSAYDNVTKAKVAIKKISPFEHQTYCQR
TLREIKILTRSESLDQMKDVYIVQCLMETDLYKLLRTQRLSNDHICYFLY
QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT
GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK
HYLDQLNHILSILGSPSTEDLNCIINEKARNYLKSLNFKPKVAWQKLYPE
ADSKALDLLEKMLTFNPHRRIKVEEALAHPYLEQYYDPADEPVAKEPFKL
EMELDALPKEKLKKLIYEETGNFXPXPPVEDEVEEPMQ
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mRNA from alignment at LSalAtl2s3744:4942..7079-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006721-702568 ID=EMLSAT00000006721-702568|Name=EMLSAT00000006721|organism=Lepeophtheirus salmonis|type=mRNA|length=2138bp|location=Sequence derived from alignment at LSalAtl2s3744:4942..7079- (Lepeophtheirus salmonis)
ATGTCGGAAGCAGGAGGAGCAGCCTCGGCAATCGTTGGGGCAACCTCTGC AGCCCAAGAGAAACTTCCTCAAAACAATGGTGAAGGAACATCCGCGGGTA GGTCATTAGATTACTCCTAGTTACGTCGTTACTTTATATTGCTATTAAAT TCCTATTATGTGTTTTGTATGTATAGGTGTAGTGGAAGGAGCAGAGAGTC TCGGAACGAGCGAGATCGTACGAGGACAAATCTTTAATTGTAAGCCTCGA TATGTGAACCTACAGTACATTGGAGAAGGCGCCTATGGAATGGTTGTGTA CGTTTCTTCTTTTCCCTTCTTCCATCCAACAGTCCATTCATGTTTTTCTC TTCTCCTTAGGTCTGCCTATGACAACGTTACAAAAGCTAAAGTCGCAATT AAGAAAATATCCCCCTTTGAGCATCAGACCTACTGTCAAAGGACTCTCAG AGAAATTAAAATACTAACGAGGTTTAATCATGANNNNNNNNGATATCCGT GACATACTTAGAAGTGAGTCATTGGATCAAATGAAGGATGTATACATTGT TCAGTGCTTGATGGAGACTGATTTGTATAAACTCTTGAGAACGCAGGTAT AAATTTACTCGGAAGATGGCATGACTAAATATGTATTATTTGGGGGGGGG GGGGGGCTGTTAAATATAAAAATAAAAAGAACCATGCATTCTTAAGATTT TAAAAAATGGAAATTGCGCCAATATATTTTCAAGCTTATGGCAATAATTA TTGAGGATCCAATATTGTACTATGTGCAATGTGTGATATTTTTACTTTGA TTAAAACTTGCAGAGTAAAAAAGCCGCCCATAATCTGATATTTGCAGCCC TGTATTAAATGCTTCCTGATTTACCAGAGAGATTCCTAATTAATGGAGAT GTATACATTATTTAAATAATTACTCTCACTAAATGAAAAATAAAAAACTA CCTCACTATGAGCAATTAAAAAAATATAGACAAGTTTTGATAATTATACA ATAAGTAATTCTTCAATTAAGGTACAAGATATTCAGGATAACTATTATTA ATACACTTGCATTTCTCCCATCATTTCAGAGACTAAGCAATGATCACATT TGTTATTTCCTTTACCAAATTCTTCGAGGGCTCAAATACATTCATTCTGC CAATGTTTTGCATAGAGATTTAAAACCTTCTAATCTTCTTCTCAACACAA CATGTGATCTTAAGATATGTGACTTTGGTCTCGCTCGTGTTGCAGATCCT GATCATGATCACACCGGTTTTTTGACAGAGTATGTTGCTACAAGATGGTA TAGAGCTCCAGAAATCATGTTGAACTCCAAAGTAATTAATTAAATCAAGG AGATTAAACTATGACTATATTTTATGTTTAATATTATAGGGGTATACCAA GTCTATTGATATTTGGTCTGTTGGTTGTATTTTGGCAGAGATGCTGTCAA ATCGTCCTATCTTTCCTGGAAAGCATTACCTAGATCAGCTTAATCACATT CTCAGCATATTAGGATCCCCTTCTACTGAAGATCTCAATTGTATTATTAA TGAAAAGGTATGCGGGCGCATTATAATATATTATAGGGGCAGAGCGAAAG TGTAACGAGTACAATATTAAAGTTTTCAACATAGAAATATTTATTATTAC AATGTTGCATATTTCCTTACATTTTTGATTAAATATCAATTAATAGTATT TTAGGATACAATTAAGTTTGAGTCATAAATCTTAGTTGTGTAGTAAGTAA GTAACTTGTTACTCCTTGGCTATGATATATACTCAATATATTACTATTTT TGTAGGCAAGGAACTATTTGAAGTCCTTGAATTTTAAACCCAAAGTTGCA TGGCAAAAGCTTTATCCTGAAGCAGATTCAAAAGCTTTGGATTTGCTTGA GAAAATGTTGACGTTTAACCCCCATCGACGCATCAAGGTCGAAGAGGCAC TGGCTCATCCGTATCTAGAACAGTATTATGATCCTGCTGATGAACCTGTA GCAAAAGAACCTTTCAAGCTGGAAATGGAGCTGGATGCGTTACCCAAGGA AAAATTGAAGAAACTTATCTACGAAGAAACTGGTAATTTTMCTCCGAGMC CTCCTGTGGAGGATGAAGTGGAAGAGCCTATGCAATAA
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