EMLSAT00000006724, EMLSAT00000006724-702571 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006724
Unique NameEMLSAT00000006724-702571
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3760supercontigLSalAtl2s3760:4671..5778 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006724 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006724EMLSAG00000006724-689490Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029498EMLSAE00000029498-738426Lepeophtheirus salmonisexon
EMLSAE00000029499EMLSAE00000029499-738427Lepeophtheirus salmonisexon
EMLSAE00000029500EMLSAE00000029500-738428Lepeophtheirus salmonisexon
EMLSAE00000029501EMLSAE00000029501-738429Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768489auto768489Lepeophtheirus salmonispolypeptide
EMLSAP00000006724EMLSAP00000006724Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006724

>EMLSAP00000006724 ID=EMLSAP00000006724|Name=EMLSAP00000006724|organism=Lepeophtheirus salmonis|type=polypeptide|length=303bp
MSPVSGVVFKKCPQNVELIGLEMKLYTRNNLETPQIFKYDEAQKLNESNF
NAAKLTRTLVHGYKTSCDHEWAVGMRQALLNESDINVFCANWENGASPLL
YDQAVANTHIVGLMIAKFFNDVSKVVGSIGPNLHLIGFSLGAHVCGIVGS
NIPNCSRISGLDPAGPAFSGKETKFRLDKDDADFVDVIHTNGFGLGIYHS
SGHVDFYANGGEKQPKCKSVELLIYFLGGPPCSHDRAPMLYTETIRNKGC
KMNGFPCKKGWEAFLMGECHETSETFPFGLNTPRNARGLLYFTTRDEAQY
CGK
back to top

mRNA from alignment at LSalAtl2s3760:4671..5778+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006724-702571 ID=EMLSAT00000006724-702571|Name=EMLSAT00000006724|organism=Lepeophtheirus salmonis|type=mRNA|length=1108bp|location=Sequence derived from alignment at LSalAtl2s3760:4671..5778+ (Lepeophtheirus salmonis)
GCATAAAAAAAGTTGTCAAAGTGACTTAGGAAGTATGAGTCCTGTTTCTG
GTGTAGTGTTCAAAAAATGCCCTCAAAATGTGGAACTAATTGGTTTAGAA
ATGAAACTTTATACACGAAATAACTTGGAAACACCACAAATTTTTAAATA
TGACGAGGCACAAAAGCTGAATGAATCCAATTTTAATGCTGCAAAACTTA
CGAGAACGCTTGTACATGGATATAAGACTAGTTGTGATCACGAATGGGCA
GTTGGAATGAGACAAGCTCTTCTGAATGAAGTAAGACTTAAAAAATAATT
TATAAGGAATTAATCAATCACAAAATATATAGTCAGATATAAATGTGTTT
TGTGCTAACTGGGAGAATGGGGCGTCACCTTTATTATATGATCAGGCAGT
AGCAAACACACATATAGTTGGATTAATGATTGCAAAATTCTTTAATGATG
TCAGTAAAGTAGTTGGATCTATTGGACCGAACCTTCATTTAATTGGCTTT
AGTCTTGGAGCACATGTGTGTGGAATTGTAGGATCTAATATACCAAATTG
TAGCCGGATATCTGGTTTGTCTAATTTAATACCATATTTTAATAATAATT
AAAACATTTGTAACATTCAGGATTGGATCCTGCTGGACCCGCTTTTAGTG
GTAAAGAGACAAAATTTAGATTGGATAAAGATGACGCAGATTTTGTTGAT
GTCATTCATACAAATGGTTTTGGTTTAGGTATTTATCATAGTTCTGGCCA
TGTTGATTTCTATGCTAATGGTGGGGAAAAACAACCGAAATGTAAATCTG
TGGAACTACTAATATATTTTTGTAAGTTTTAATGAGAGTCAAATAGAAAT
TTAGTGCAATTTTTATGTTACAAAATAGTGGGGGGACCACCCTGTAGTCA
TGACCGAGCTCCAATGTTGTATACAGAAACTATTAGAAATAAGGGATGTA
AAATGAATGGGTTTCCTTGTAAAAAAGGATGGGAAGCTTTCTTAATGGGT
GAATGCCACGAGACATCAGAAACATTCCCTTTTGGTCTGAACACTCCTCG
TAATGCAAGGGGATTATTGTATTTTACAACAAGAGATGAGGCTCAATATT
GTGGTAAG
back to top
Add to Basket