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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s3772 | supercontig | LSalAtl2s3772:1033..7567 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006726 >EMLSAP00000006726 ID=EMLSAP00000006726|Name=EMLSAP00000006726|organism=Lepeophtheirus salmonis|type=polypeptide|length=601bp
VNSANGGNASSSGSHXGSSHHHHLSLSNSSSSHGSQHHGNNSGNAGGSVN
CMSHSNSPNTGSPPNGLPGLPGSAPINMWPLIWNHITKPRIYGVEEKKRE
RVRQEYKSLLKVAELLKVKGLVEEEREKLLNSSKEGGRPLISVAPTENDG
NKNNNGVPPSIVNGEVKRNGKEDVRGFNMYGPAGLPIWPLSGMFPGAHNL
FTEQGTNNKESSPSSPNERRSDWGSGHKRKKMSGGHHAPPKDPVISPHHN
NSRKEDDQPIESNMNRSESMEMDEKGQGSQQTNGXSGSHSNEKGGIANYV
PNQRLEWKRYKQYTRNDIMAAIDEVRKGMSALQASRKFGVPSRTLYDKVK
KMGITTGRQMQRKSMPQYPASFPSLSSISDTYKDLKDNEDMNXSDIDTGR
PSMVAPTFPSYMLNIMEKMKEAEGNGGGEGKHGISPINLSNMLANANNRS
SSDMMRPESSNSPINAVKRSSEGSAPQSPSSGENESSSNDQESNGVTTSG
EIRAQFMADLRRLGTGGGGNSIVGDSNRGYSDDIPLSPSKSPSETADNLL
PPRKRKVSQEHHLQALLTAAAVASAAEKSAENGLDRRVEVKDECDGNRSP
N back to topmRNA from alignment at LSalAtl2s3772:1033..7567- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006726-702573 ID=EMLSAT00000006726-702573|Name=EMLSAT00000006726|organism=Lepeophtheirus salmonis|type=mRNA|length=6535bp|location=Sequence derived from alignment at LSalAtl2s3772:1033..7567- (Lepeophtheirus salmonis)
GTGAATAGTGCCAATGGTGGGAATGCCAGTAGTTCCGGATCGCATCKCGG
ATCCTCTCACCACCATCATCTTTCACTTAGTAACTCATCCTCCAGTCACG
GATCTCAACACCACGGCAACAATAGTGGCAACGCGGGCGGCAGTGTCAAC
TGTATGAGTCATTCCAACTCACCCAATACGGGATCCCCACCCAATGGGCT
CCCTGGTCTACCAGGGAGTGCACCAATTAATATGTGGCCATTGATTTGGA
ATCATATCACAAAGTAAGTTGTTCTTCTTTACTGTATTGCATTGCGTTCT
TGATTTTTATAATTTGCAATTCAGGGGCAGACGACGCAAAAAAAAGAAGC
AAAATATTGCAATTCTTCCTTCTCTTTTCCCTTTTCATACATTAGTGGAA
TAAATAATATTACATCACGACGTGGGTTCCTCTTCTCTCCTTTTTTTTTG
CAGCAGACTACGCAAAATAAACTGCAAAAAAAGAGGGGGAAAACTCCAGT
TTTGTGTCTACGACATAAAAATAGTACGGAAGGAGAAAGTACCCTGCGTC
AGGCAGAGGTTGAAGACTATTTTAGCAATGAATTACTTTGATGAATAAGA
CATAATTTTGAATAGATTTCCCCTCATATTTGTATGTAATTTGTCTCCCC
TCTTCTCATAATTTAGATAGCTTGAGGTAGAAGGAGAAAAACAAGACCCC
CCCCCCCCATACACACACTACTCCTCAGTCAGRCCATTCCTTTTGCAACG
ACTTGCAATTAAATCATTCCACAGATAGAGGAGGGGGAGGGAGGGGGMAG
GMAGGAATAATATTTTAAGCCTAAAAAAGTAGAAAGCCCCAATTCTTCCC
TTCTCCTCCTGCTAATATCGCTGCTGCTTTCAAATCTAAGGTGAATGACT
CAGTTCATTTTAGCCAGACATGCGATATTTAATTATCATAGTATATATGT
ATTTACATTTATTATTTAGTGAATCTATGCGTGTAGTGTGTACTTCATAG
ATAATGTAACTTAGCGAAGGCCTCATACAGACAATCTACGTATATTACAA
TATGGCTTCTTTTCCTCTTCCTTTTTTCTTTATTCTGCTATGATTCTGCT
GCAGATGTCTATAATAATAATATTAATAGCTATTCTGTGACGTAGGAGGG
AGGGAGTAGGAAAAAGAAGGACGATTGAGGGGGGAAGGGAAGGGGAAAAA
TACTGCAATTCATAAAATAAAATAAATCGTCAATTAGTAATTTTTATAAA
GAAATGATTAATTTCTTTAGTAATTATATCAATATTTATAACTAATATGT
GACGTATGAGTAGGGAAAAGAAGAGAAGAGAAGGGAAAAAATACTGCAGT
GCAATAAATAAAAAAATTCGTCAATTAGTAAATTTAAAAAAAAACTGTTA
TTAATTCCTTTGGTTTCTAGCTATCCCTTCTATGATGTATTTATCGTACG
TACATAACTCACTTTATTATAAATTTCTCTTGATTGATTAAAAACACACA
CAAATGATGGGAGGGGGTAGTTGTACTACACAACATAGTACCTATGCAAG
GAGTAGTGGAGGTGAAAAAGCACCTGAATTATTATGATTGTTACATTTCA
TTATCTTTTCCTTTTGATATAAAAAATAAATTAGGCCAACCGGGTGTTTG
CGAAGAGAGCGCGATGGGGTAAAACGTCCTTCTATGCTTGTGTGTGTGTT
AGTATTTTTTTCACATTTTGAAAGGGAATAARAACATTTCCGTGACTCTG
GGGAGAGAGAGGGGAGAATGTATATATTTATTATTATTTAAATGAAAGTT
CGGCAAAATTATTCATTACGAAATGTTTGACCTGTAGTACAAGTAGGTAT
AACGGGTTTCTTCTAACTATACATTTCTAATTTTAACTAGTATGGTCAGT
CAGTTCAACGTTCCCTCGTTTTGGCTTTTATAGCTAATATAATAATATTA
TCTTGCCCTCTCACTCCTTCTTTGCAGCTTTTAATGAAAACTTGTGTTTG
TACTCTGTGACACGTCAATGCAAATAAATATGTACTTTTTGTTCTCTTTT
CTTCTTTTTTTTATCGAAAAAAAGAAAGAAAAAGAAGAGGGAAAGAGAAA
GAAAGAGAACGAACCAGAAATGCAAATAATTTGAACGGCCCTGAACTGCC
TTTTCCTTTATATTATTATTATGTAAAAAAAAAATATTTGATACATTAAA
ATGCATTAATGTAGGTATCTATAAAGTAAGTTGGAACAAGAGGAAATTAT
TCGTCAATAGTACTGCTGCTAGCTGACTATATATGTATTTATATAGTTTT
TTGTGAATGCATCCTGGATTTGCAGCTTCTTCTTCTTAATAAGGAAGCGT
CTGGTTTTTTGGGCTGCTGGGCTGTGGTAAAAGACAAGAGAATGCGTGCG
CGCTAATAATTTTTTTGTCTGGAAAATGCAATTCTTTCAGGTTGCTATTG
ACTGTGAAAAAAGTTCAGTTTGCAAAGAAGTGTGGGTCTCTGAGTAGTGT
GTGTTATGGCTAYATAGAACCTTTGGTGTGTTTATATATTTTTTAGTTCT
ATCAATTTGTTATCCTTTCAATCATCTTGGAGCCGTGCTTTGTTGGTAGA
GGTTCTGAAGTTAGAATGCACTTCATATACTAACTACTTACTTTAAGTGT
ACTAGTATTAGTTATAGTGTGTTGTGTAACAACGACAATTCTCKCTCCTT
CCATTACATCACTAATCATACTATATAGCCAGCACATAGTATGTACTAGG
ATTAATTAATTTATCAATTTTCAAGTTGATGTCGACGACCTTTTTGTATG
TCCCCCCCCCTTCTCTTTTTCCCTTCCTTCCTTCTTCTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTTTTTCG
CTACTGCCAATCTGCCTCTTCTGCAATTCAGCCGCGCAAATATTTTTAAT
AAATAACGGGTCTGCTTTTTTTGTTATTTTACTTTGTACTCTTTAGACCC
CGTATATATGGAGTAGAGGAAAAGAAAAGAGAGAGAGTGAGGCAAGAGTA
CAAAAGTGAATTTGCAATTATTTTACGCGAATTCACTTTTTTGTCGTACT
GCTATTTTAAGCAACGTTGCATGGATGTTGTGTTGGGGGGGGGGAACTTA
AGATTATGCAGTGTTTTTTTCTATGAATCTGTATTTTATACATTGCTTAA
CATTTAACAAAATATGTATCTCTTAGAGTGTTAGTAGAAGGTGGAAAAAA
GAGAGAGAAACTCCTAATGAAAAAGGCTAGGCTTCACATGTACATTTAAC
ATAGACATAGTACAGGAGCAGCGGAAAAGAGGGGGTTGCAGTTTCGTACT
CTCTCCCCCGAAGAAGTACATACTCCCTTTTACGCAGGCTTTGAAGGAAA
GGAGATTTAATACTACTTCTTTTTTATATTTTTTATTTGCAATCCAAGAG
TTGAATGTACTTTTTCAGTCTGAGTTGAGTGAAGAGAACATGAGTGTTTA
TTAGTAATATGCCGAACTTTTATTTATCTGATATAATGAAGTGAGTAAAG
AGTTGGTTCGATAGTTTTTTGTTTTTTTTTGTGCGTTGAGTTGAAGGTTT
TTAAACTGGTTTTATTTTATGTGGGGGTGAAAGTTACCTGATGAATAGGC
TCCMCAGCCACTAACAGGAAAAGGGGTTATTTAGAAGACTGTCTTAATAT
ATATATATTTATAGCATTAAATATCATCCATCCTAACCTTATAAATAATA
AAAACATAAACATGTCTAGCCTGACGTTGTTTGTGATATCAGTATTATTA
ATGATCCCTTCTTCATTTCCAGCTTACTACCTCAATTGTCGATCGCCAAG
ATGGACCCTCTATCTCAAGTATTCTGTCTCCGATGGAACAATCATAGAAA
TAACCTCCTCTCGGTCTTTGATCATCTCCTACAAACGGAAGCCTTTTGCG
ACGTCACCCTTGCCTGCGATGGCTCCTCCATTAAATGCCATAAAATGATT
TTGTCCGCTTGCTCCTCTTATTTCCAAACTTTGTTCATGGAAAACACTTG
CGAACATCCCATTGTTTTTCTTAAAGACATCAAATACAATGAAATCCGGG
CCATTCTGGATTATATGTACAAAGGAGAAGTCAATGTCGCTCAAGAGGAA
CTACCCGGTAATTTTATCATCTCTTATCTTATMCTCTTAGCCTAAWAATA
ATAAMAATAACAGCASCAGCCATTTCAACAGATGTAATAATAATTATATA
ATTTATTTCGGGAAAGAGGGGGATATATTTTTTTTATACTAGAACGACAA
CTACTCGGCTCCCATGAAAAAACTTTTTCCCTTTTTATATTTTATTTTTT
GCTAAGGGAATAAATAGTACTACTATAGTTAGATATATAGAACTGCTAGA
GGGAGTTGAAAAAGAAAGAGAAAGAGAGCAATGACATTTCCCCCTCCCCC
ACTAAACTAATATTCGACTACAACTAATACTACAGCTCTTCTTCTCTTGC
TTGCTCTGCTAGTGCAGATTTATCCTGAAAAATTTAAGATGCGAATTGAA
GGGAAAGGGAAAGAACAAATAAGAAAAAGAAACTAGGTTAAAGTTACCCC
CTCTTCCATATTTATAAGAAAAAAAGATATTAAAAGCTGCAAAACTCTAA
AAGAAGGGGATAATAGGGGGAAGCAAAAGTTGCCCGCCTTCTCCTCCTAT
TGCAGCGTCCCCCTTTTGCATATTGACCCAGTTATATATACTTATTAAAA
GTAGAAAAAATAAAAATCTGCAATTATGCATAAACTTCACTTTCGCTATT
TTGTATAGGTCTTCTAAAAGTGGCTGAACTCTTGAAAGTGAAGGGKCTCG
TAGAAGAGGAAAGAGAGAAACTACTCAACAGTTCCAAGGAGGGGGGTCGT
CCTTTGATCTCGGTAGCCCCTACTGAAAATGATGGAAATAAAAATAATAA
TGGAGTTCCCCCCTCCATCGTTAATGGTGAGGTCAAAAGAAATGGCAAAG
AGGATGTTCGTGGATTCAATATGTATGGCCCAGCGGGTCTACCTATTTGG
CCACTTTCGGGCATGTTCCCTGGTGCTCACAATTTATTTACTGAACAAGG
GACTAATAACAAAGAAAGTAGTCCCTCAAGTCCGAATGAGAGAAGATCCG
ACTGGGGAAGTGGTCATAAAAGGAAGAAAATGTCCGGTGGACATCATGCT
CCTCCTAAAGACCCCGTCATTTCGCCTCATCACAACAATTCAAGAAAGGA
AGACGACCAGGTTAGTAACTTAATTACTATTTGTAGACCAAGAAGGCGTT
TAATACTATTTATCTCTCTTAATAGCCCATTGAATCCAATATGAATAGAT
CAGAGAGTATGGAAATGGATGAAAAAGGACAAGGGTCTCAACAGACTAAC
GGCAGKAGTGGATCACATTCAAATGAAAAAGGTGGAATTGCAAATTATGT
ACCGAATCAAAGACTGGAATGGAAGAGATATAAACAATACACAAGAAATG
ATATAATGGCGGCGATTGATGAAGTAAGGAAAGGKATGTCAGCATTACAG
GCTTCGCGGAAATTTGGTGTACCTTCACGCACCTTATATGACAAAGTTAA
GAAAATGGGAATCACAACTGGAAGACAAATGCAACGGAAATCTATGCCAC
AATATCCAGCATCATTTCCCTCACTTAGCGTATGTATCTTAATAAATATT
ATACAAGTATTTCAATAAAAAAATGAATTTTTTCTTTAGTCAATTTCTGA
TACGTACAAAGACTTAAAGGATAACGAAGATATGAATGMCTCTGACATTG
ATACYGGTAGACCCTCCATGGTAGCCCCAACATTTCCGTCTTATGTAAGT
AATCGACCAACAAGAATAAATTTATCATTCTTATAATTTTCTGATTTATT
TGATTTTCTTAGATGTTGAATATTATGGAAAAAATGAAAGAGGCAGAAGG
AAATGGCGGAGGCGAAGGAAAGCACGGAATAAGTCCCATAAATTTAAGTA
ACATGCTAGCAAATGCAAACAATAGAAGTTCTTCAGATATGATGAGACCT
GAAAGTTCCAATTCTCCTATAAATGCTGTGAAACGATCATCGGAAGGATC
TGCACCGCAAAGCCCTAGCTCTGGAGAAAACGAATCATCTTCAAATGATC
AAGAATCGAATGGCGTAACAACATCAGGAGAGATCCGTGCTCAATTTATG
GCAGATTTACGTCGATTAGGTACTGGCGGKGGCGGKAATAGTATTGTGGG
AGATAGCAATCGAGGCTACTCGGATGATATACCCCTCTCTCCATCAAAGT
CCCCATCAGAAACCGCAGATAATTTATTACCTCCTCGCAAACGCAAAGTA
AGCCAAGAGCACCATCTTCAAGCTTTGCTAACTGCTGCTGCAGTCGCATC
TGCAGCTGAAAAATCCGCTGAAAACGGATTAGATCGTCGAGTAGAAGTGA
AGGATGAGTGTGATGGGAATAGAAGTCCCAATTAA back to top
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