EMLSAT00000006760, EMLSAT00000006760-702607 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006760
Unique NameEMLSAT00000006760-702607
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s378supercontigLSalAtl2s378:96640..99039 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006760 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006760EMLSAG00000006760-689526Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029689EMLSAE00000029689-738617Lepeophtheirus salmonisexon
EMLSAE00000029690EMLSAE00000029690-738618Lepeophtheirus salmonisexon
EMLSAE00000029691EMLSAE00000029691-738619Lepeophtheirus salmonisexon
EMLSAE00000029692EMLSAE00000029692-738620Lepeophtheirus salmonisexon
EMLSAE00000029693EMLSAE00000029693-738621Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772029auto772029Lepeophtheirus salmonispolypeptide
EMLSAP00000006760EMLSAP00000006760Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006760

>EMLSAP00000006760 ID=EMLSAP00000006760|Name=EMLSAP00000006760|organism=Lepeophtheirus salmonis|type=polypeptide|length=198bp
MTEIAGDSLTLSRDVKRACELLEKLQKSKYCGEVPATKLAALQKVLQSEF
LNAVREVYEHVYETVDVQGSPEIRASATAKATVAAFAASEGHAHPRVVEL
PKTEEGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVNGV
SVEGEHHEKAVDLLKAASGSVKLVVRYKKLIYSMHPLHLLCYSYYCQG
back to top

mRNA from alignment at LSalAtl2s378:96640..99039+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006760-702607 ID=EMLSAT00000006760-702607|Name=EMLSAT00000006760|organism=Lepeophtheirus salmonis|type=mRNA|length=2400bp|location=Sequence derived from alignment at LSalAtl2s378:96640..99039+ (Lepeophtheirus salmonis)
CTCGACTATACGTGAACGTCTCCTTCGGATTTAATAAATAATATTATTTA TTAATATCTAGTGAAGTGACCCTCATCGCGCTTCCAGAGAGATCTCGACC TAGAACCATGACAGAAATTGCTGGAGATTCCCTTACATTGTCCAGAGGTA ATATTATCTCGATTCCATTGTACTGTATGAACTATTTGTATTCCCTCTAT GATTTCAGATGTGAAAAGAGCCTGCGAGTTGTTGGAGAAACTCCAGAAAA GTAAATATTGTAAGTGTCGCAAATGACTGGAGTGTTAAAGGGATGAATGG TAATTTTGAGTTAATATATTTGTATCTTAGGTGGTGAAGTTCCTGCAACG AAATTAGCAGCGCTTCAAAAGGTGCTACAGTCAGAATTTCTGAACGCAGT GAGAGAAGTATATGAACATGTTTACGAGACGGTTGACGTTCAAGGCTCTC CAGAGATCCGTGCCTCAGCCACAGCAAAAGTAATTTGAATGAGTGTGGAG TATGGATTATTTAACATGATTTCAATTTTGACTTTCAGGCAACAGTTGCA GCTTTTGCGGCAAGCGAAGGCCATGCCCATCCTCGTGTTGTAGAACTTCC AAAGACAGAAGAAGGCCTTGGCTTTAACGTAATGGGCGGAAAAGAGCAGA ACTCCCCAATTTACATATCTCGAATCATTCCTGGTATGCCACTCTGATAT TCCTAACTCAATTAAAGAGACCCATTCTTCTTTATAATATATAGCATAGA AATGTTAGTTGGCATAATTTGTTGTGTTTCTATAATATAATCATTATTTA TTCCTTTCAATGAATCTCTCAGAATCAAAAACAAAAAAAAATTGTGTGCA TTTTCTTTGTGAATTTTATGTCCTATATCTAAACCTACATAAATATTTAT ACTTCATAGAATTTACAACATTCGAAAACAGGACTTGTGCTTTGAATTGA ATGTTGTTTAAATCTATTGAATCAATGACTAAGTGAAATAAACAATATAA TAATAACATATTTCTCTTTAAATGCCTTTTATAACTATTTACTGAGTTAG AATTCCATGGGCTAGCTAACAAGTCTTCCCTTAATTGTCATTGAATAAAG TTAAATTTCCCTCCTTCAAATAGTATACATATTAGGATAGTTTCATGTTT GACAAATACTCTATAAACAAGAGATGCCTCATAAGCATAATTCACAGAAA CTATAAATGAGAAATAAAAACCACTCAATGACATTGTATGACCATAAAAA CAAAAATTATTCTTATCTTATAATGGCACTTTATTTTAATTTTAATACCA CTATTACTGATTTTTTCAGGTGGTGTTGCTGATAGACATGGTGGACTCAA GAGGGGTGATCAGCTCCTTTCTGTTAATGGAGTATCTGTTGAAGGAGAGC ACCATGAAAAAGCCGTTGATTTACTCAAAGCTGCTTCCGGTTCTGTAAAA TTGGTAGTGAGGTATAAAAAATTAATTTATTCAATGCACCCATTGCATTT ATTATGCTATTCCTATTATTGTCAAGGATAGAGAGAGAGAGAGAAACCAA AAAAAAAAAAGATTAGTAATTTTAAACAAGAATCTTCTGGAATAGTGTTT AGTCTTACAAATTTAAATAGCAAGTGAATTCAGTAACACTGTAGGAAACT GAATTCACTTGCTATTTAAATTTGTCAGAGGGAGGGATGAAATAAGTTTT AAAATTATTCGTGAACAATTCAGATACATGGCAGCTCATTCGCAAGAAAA TAAATATGGATTTCATTTGTACTCTTCTATTAATTAATTAACTTCGATTT CAATTGGTTTTAATTTGATATACTAAAATATTGATTAAGGCATATCATAA ATGAGATCCAAATAAATTATATTCAATCAAATGAAGACTTTGGATCAGTG TTACTTAAACACATAATTAAATAACATTTTTTTTGTTTTGTTTTCTTTTA GATAGTTTAGGTAATTAATTTTTGCATCAGACTAGCCCATTCTACGGGAT GTAGTATTACACAGTGGCGATCATTTTTAAAAATGCTGTTCTAGACTATC CTTCCTAGACATCTCTATAAATTTGAATATAAATCTAAAAATTAACTGAT ATAAGTCTGAGAAATATTAAGCTGTTTATATACTAAATATATTTATAGAA CAAAAAAAATACATTGGTAATTTCTCATTTTTTTGTTGGGGTTTGTTCAA AATTACATTTTTGTTGAACAGCTACATATCTAGTGGTGTTTGATTCATTT ATACAATTGAGGATGATAAGTAATGTACACTCAAGACCAGCTCCCAATAT GAAATTATCTCATTTTTTAATTTCTAAATAATGTTACGAACGGCTTGGCT CTTGTATATTACATAAAGAGAAATGGAACTTTATTTCTATTTTAGGTACA
back to top
Add to Basket