EMLSAT00000006769, EMLSAT00000006769-702616 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006769
Unique NameEMLSAT00000006769-702616
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s379supercontigLSalAtl2s379:476161..478870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006769 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006769EMLSAG00000006769-689535Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029736EMLSAE00000029736-738664Lepeophtheirus salmonisexon
EMLSAE00000029737EMLSAE00000029737-738665Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778006auto778006Lepeophtheirus salmonispolypeptide
EMLSAP00000006769EMLSAP00000006769Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006769

>EMLSAP00000006769 ID=EMLSAP00000006769|Name=EMLSAP00000006769|organism=Lepeophtheirus salmonis|type=polypeptide|length=261bp
MSVNESPQEDYYSSSSSTSYYDDSGAHSYSSSSFYSYQGSQAQQQAHXSH
SNNGYYDYSQNMQSQNSHHHIQHHSQAPQQQSNNQYDYNNYSDENHLYSS
PNDYFGESRTPTLPHNQGGTGSGAGLISTKRKSPVFGPGSNKKERRRTQS
INNAFASLRDCIPNVPCDTKLSKIKTLRLATSYIDYLITLLNSENSDNIL
LEGFKVDIHKKWNDKSEDQKRRELEEELNSGGASNRGSNKMVKGGGGRTG
WPQHVWALELK
back to top

mRNA from alignment at LSalAtl2s379:476161..478870-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006769-702616 ID=EMLSAT00000006769-702616|Name=EMLSAT00000006769|organism=Lepeophtheirus salmonis|type=mRNA|length=2710bp|location=Sequence derived from alignment at LSalAtl2s379:476161..478870- (Lepeophtheirus salmonis)
ATGTCCGTGAATGAGAGTCCGCAGGAGGATTACTACTCCTCCTCGTCTTC GACATCCTACTACGATGACTCCGGAGCGCATTCTTATTCCTCTTCATCTT TTTACTCCTATCAAGGAAGTCAGGCACAGCAACAAGCACATTMCTCTCAC AGCAACAATGGATACTACGATTACTCCCAAAACATGCAATCCCAAAATTC TCATCATCACATACAGCATCATTCACAAGCCCCACAGCAACAATCTAATA ATCAGTATGACTACAACAATTACTCGGATGAGAATCACCTCTATTCTTCC CCCAATGACTACTTTGGAGAATCCCGTACTCCCACGTTACCTCATAATCA AGGAGGAACAGGAAGCGGRGCAGGCCTCATCTCTACAAAGAGAAAATCCC CCGTGTTTGGACCTGGTAGTAACAAAAAGGAGCGCCGACGAACTCAGTCC ATCAACAATGCCTTTGCATCCCTTCGTGACTGCATACCCAACGTACCCTG CGACACGAAATTGAGTAAAATTAAGACACTCAGACTTGCTACATCATATA TAGATTATCTTATTACCTTACTCAACTCTGAAAATTCGGATAATATCCTG TTGGAGGGGTTTAAGGTGGATATTCATAAAAAATGGAATGACAAGTCAGA GGATCAGAAAAGGAGAGAATTGGTAAGGAACAAGATGGAGGTTTTTCTAC AATTTGCACATTGATTATGTATGTACATTGTGACAATATATGTATATGTA TGTACAGTACTCTGATTCCTTCCATCGGAAGTAATACTTCATTAGAAAGG GAATGTCGTTTTAATTACGGCTCTGTTTTATGTAAGCTCCTAATTGGGAA ATTCCGTTCATTCTTCCTCAGAGTAAGAGGGAGTGAGGGAATATATATTA TGAATCATTTATAGGAAATGAAATTATGCAATACCTTTGAGCTCAAATTT TATGTAAAAGCAAATACTTCAATGTAGTATTGACCTTTGGGTCAAAAATG TACATTATTTGATCTCGCTGTAAAATTCAATCAAGAAAAAAAATCAATTT TGATCCGGTTCTGTGTCATTTTTTTTTTTAGAAAGGACTGATTTAAAGAA AAAAATTACAGCTTTGAATATTATTATTTTTTTTTTTTAATTTGACAAAA AAAAAAGCAAGCAATTTTGACAACATTTATTCATTTTTTCAAAAAAAAAG TAGTTGTATTTTCGTCAAATTTGACAATATTTTAGTCGGGTAGTTACGGG GCTGGATTCTTTCATTAGAAAATTGAATTTCAGTTCACGCTCTGAGGTTT GATCTATGATTTGAATTTCGTTCCACAGTCTGAATTTTGGGTATGGATAT AAATATTTGTCCAGATCATAGACAAGTATAGATTGATTGAGAGCGCTTAT ATCGCATAAGCTCACGTCAACTGTTGTTTTCCTCACTTTATGATGCATTA TATATCACGAAACCTTTCATACAAAAAGAAGCCCCCAAAAAGATTCCTAG ATTACTTAGTAATTAGGCCAATTCTTCTCAAATATGGAATAGTTATTCAA TCATTGTTGAGAAGTGTTTACTGCTTAAAAAGAACTAATTCTAATTCAAC CAATTAACGTTCAGAATACTGATTAGGGGGAGTTTAAATATCCACAGCTA ACAACAATATACACTGCATACTGTTGTGCTTGTAAGGTTAGGCCTTAATA GAATGAATGAAGTACACAGTTCTGAGCCTTTTTTTGCTTTATCTTGACAA CAAAATTAACATAGATAGGATTATCCGATTGAGATGGTTCCAAATAGTCT TCTGGCTAATCTTCAGTTCCAAGGCAATGGAATAAGTACTCAAATGCTAT CTTAACGACATTTTCGATGTCCATATTACACGAAAGGAATAGTTGGAACC ACTACTTTGATGTTGACTACGATACCGTAGTGGGTCCATTAACAGCAAAA AAAAATTGGTCATCTGCTTCGCCTTTTGACCGAGTAATACAGAAGAATAT ATTGAATTTTCTCTTTTTTTATTTCCATTTTGGAAAGCTGTCACACACAA CTGACGTCACCAAACACAAAATTTTGAATAAAATTGTTTTAAGTGTACAC TTGGCCTTTAACCATATTTTAAGCTTTTTTTAATGAAATGTACTAATCGT GAGATATAGTTCGCAAAAGACATCCAGTGAAAAACACTCTAAACTTTTTA CTTGACCTAATATATACTTGAAAGTCAAGAAAAAAACAAAAGAGAAAAAA TAGCTCAACATAGCATACAGCCTCCAACAAAAACTAACGTGAATTTATAC AATAACAACCTCTTTAAGAACAACTATCCCACTCTATATATTTTGTATTG ACCAAAAAAAAATTCCTGCAAACCGGGCTGGGAAAAAATTCGGTCTTGGA CCGAGTTTAAACACTAATTCTAAGCCTTTATGTATGCACTAAGTATCTAC CACGTCGAATGTGTGGTCCTGACTTTTTCTGTCATTATTATTTTACATAA TTGAAGGGTGACAAAGCGGAAATAACCTAGTTTTGAACTCGTCATCAACC CTCCCAATAAATTTAAATATATAATTAAAATTTTTTTCTTTATAAGGAAG AGGAACTGAATAGCGGCGGGGCAAGTAATCGAGGATCCAACAAAATGGTC AAAGGTGGAGGAGGAAGAACTGGGTGGCCTCAACACGTATGGGCTCTAGA ACTTAAATAA
back to top
Add to Basket