EMLSAT00000006770, EMLSAT00000006770-702617 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006770
Unique NameEMLSAT00000006770-702617
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s379supercontigLSalAtl2s379:507876..509081 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006770 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006770EMLSAG00000006770-689536Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029738EMLSAE00000029738-738666Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778272auto778272Lepeophtheirus salmonispolypeptide
EMLSAP00000006770EMLSAP00000006770Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006770

>EMLSAP00000006770 ID=EMLSAP00000006770|Name=EMLSAP00000006770|organism=Lepeophtheirus salmonis|type=polypeptide|length=401bp
MFGAEEDVVGGGGVXLEGAVSSGMSSGQSALGRVPTPPPSDAXPPVAENW
CYTQVKVVKFSYMWTISNFSFCREEMGEVLKSSTFSAGQNDKLKWCLRVN
PKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRA
YRFVQGKDWGFKKFIRRDFLLDESNGLLPDDKLTLFCEVSVVADSVNISG
QSNAVQFKVPDCRLSEDFNGLFESAQFADVTLACQGREFKCHKALLTARS
QVFAAMFEHDMEESKHNRVEVKDVDPDVMXXMLRFIYTGRANNLENMAAD
XLAAADKYALDRLKVSCEEALCNSLTVENVSEILILADLHSAEQLKAQAI
DFINTRHVTDVMETAGWKQMVSTNPHLIAEAFKALANQQIPPMGPPRKKL
K
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mRNA from alignment at LSalAtl2s379:507876..509081+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006770-702617 ID=EMLSAT00000006770-702617|Name=EMLSAT00000006770|organism=Lepeophtheirus salmonis|type=mRNA|length=1206bp|location=Sequence derived from alignment at LSalAtl2s379:507876..509081+ (Lepeophtheirus salmonis)
ATGTTTGGGGCGGAAGAGGATGTTGTTGGTGGAGGAGGAGTGGMCCTAGA
AGGAGCCGTCTCGTCGGGAATGTCTTCTGGACAGTCTGCCCTGGGTCGTG
TTCCGACGCCTCCTCCGTCGGACGCGMCTCCGCCTGTGGCCGAGAACTGG
TGCTACACGCAGGTGAAAGTGGTGAAGTTTTCGTACATGTGGACCATCTC
CAACTTTTCCTTTTGCCGCGAGGAGATGGGAGAAGTCCTCAAGTCCTCCA
CCTTTTCCGCTGGACAAAATGATAAACTCAAGTGGTGTTTACGAGTGAAT
CCCAAGGGGCTGGACGAGGAGAGCAAGGACTACCTCAGCCTCTATCTTCT
CCTCGTCTCTTGCAACAAATCAGAAGTCAGAGCCAAATTCAAATTCTCCA
TTCTCAATGCCAAAAGAGAGGAAACCAAAGCCATGGAGAGCCAAAGGGCC
TATCGATTCGTTCAGGGAAAAGATTGGGGCTTCAAAAAATTCATACGAAG
GGACTTTTTATTAGATGAATCCAATGGACTCCTTCCTGACGACAAACTCA
CTCTCTTTTGTGAGGTGTCTGTCGTTGCTGATAGTGTTAATATTTCAGGA
CAATCCAACGCTGTTCAATTTAAAGTGCCAGATTGTAGACTTTCGGAAGA
CTTCAATGGTCTATTTGAATCAGCTCAATTTGCAGACGTGACACTAGCAT
GTCAAGGACGGGAATTCAAATGTCATAAAGCGCTACTCACAGCACGGTCT
CAAGTCTTTGCCGCTATGTTTGAGCATGACATGGAGGAGAGCAAACATAA
TCGAGTGGAAGTCAAAGACGTGGACCCGGATGTTATGGKTGYTATGCTCA
GATTTATCTACACAGGACGAGCTAACAATTTAGAGAACATGGCTGCGGAT
TTNCTCGCAGCTGCCGATAAATATGCCTTAGATAGGCTGAAAGTCTCGTG
TGAAGAGGCATTGTGTAATAGTCTTACTGTCGAGAATGTTTCAGAGATTC
TTATTCTTGCGGATCTCCATTCTGCAGAACAACTCAAGGCTCAAGCGATT
GACTTTATCAATACACGTCACGTTACAGATGTCATGGAGACTGCTGGTTG
GAAACAAATGGTTTCCACAAACCCTCACCTCATTGCAGAAGCTTTTAAAG
CATTAGCTAACCAACAAATTCCCCCTATGGGTCCCCCAAGGAAAAAATTA
AAATGA
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