EMLSAT00000006778, EMLSAT00000006778-702625 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006778
Unique NameEMLSAT00000006778-702625
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s37supercontigLSalAtl2s37:470814..472328 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006778 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006778EMLSAG00000006778-689544Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029759EMLSAE00000029759-738687Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777978auto777978Lepeophtheirus salmonispolypeptide
EMLSAP00000006778EMLSAP00000006778Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006778

>EMLSAP00000006778 ID=EMLSAP00000006778|Name=EMLSAP00000006778|organism=Lepeophtheirus salmonis|type=polypeptide|length=504bp
MSTPVQTKGKKRRRTRSGQSSSPSPNGLKGFIVPGFNSSGAHSKMSLNEL
MDTARGVTNMVLAHEIAVNKDFKLEDFKGEASPLEKSVKEMIHKAFWDSL
KDELKEKPPIFKGALSVFGEAKEIILRLLILPQHQRLQSDIKEKLDLELI
KQQAEHGVLDVESYAQYVLELMAKLCAPIRDEQIAELNKRTDIVHLLKGI
METLDMMNLDMANFTLHRAKPIIIARSVEYEKEKFKEFLSKQDDGLXATR
EWLXRYAPSEDVTHGESPTTAQYKKLMINRVLIDAFCELLEWDDYYEVPE
TLVMDYKRIVSMRDSCERXAVSTAVILSAFSNIANFIVPADAQNIKMKIK
KDIDVLLQDFFVDEDLTEILPRLGDQIVKIINEYLVDQKKKDPLSEDIVK
MIKANLSEMEDPNHRIRDLVQKRIVEFCKRXATGSKNTQLQVPPGLTICQ
QQLGMIAGAFVQLISYNRSVFGETYVDLIENHVLFKEDEKENNSSSRESR
PIEA
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mRNA from alignment at LSalAtl2s37:470814..472328-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006778-702625 ID=EMLSAT00000006778-702625|Name=EMLSAT00000006778|organism=Lepeophtheirus salmonis|type=mRNA|length=1515bp|location=Sequence derived from alignment at LSalAtl2s37:470814..472328- (Lepeophtheirus salmonis)
ATGTCGACTCCAGTACAAACCAAGGGTAAAAAGCGCCGAAGAACCAGAAG
TGGACAATCCAGCTCACCTTCACCCAATGGATTGAAAGGCTTTATCGTCC
CAGGGTTCAACTCTTCTGGAGCCCATTCGAAAATGTCTCTTAATGAGCTC
ATGGACACTGCGAGAGGAGTTACAAATATGGTGTTAGCTCATGAAATCGC
TGTTAATAAGGATTTTAAGCTTGAGGATTTCAAGGGYGAAGCTTCCCCAT
TGGAAAAAAGTGTGAAGGAAATGATTCACAAGGCTTTTTGGGACTCCTTG
AAGGATGAGCTGAAGGAGAAGCCACCGATTTTCAAGGGGGCTTTGTCCGT
CTTTGGGGAAGCGAAGGAAATCATTCTTCGTCTTCTCATACTCCCACAAC
ATCAACGATTACAAAGTGACATTAAAGAAAAGTTGGATTTGGAACTTATC
AAGCAGCAGGCAGAGCATGGGGTTTTGGATGTTGAAAGCTACGCGCAATA
TGTTCTTGAACTTATGGCTAAGCTATGTGCTCCCATTCGAGATGAACAAA
TTGCTGAACTTAATAAAAGAACGGATATTGTTCACTTGCTGAAAGGAATC
ATGGAGACACTTGATATGATGAACCTGGATATGGCCAATTTTACTTTACA
TCGAGCAAAGCCCATTATTATAGCTAGATCCGTTGAATATGAAAAAGAAA
AATTCAAAGAATTTCTTTCTAAACAAGATGATGGTCTTSGAGCCACTCGT
GAATGGCTTYAACGCTATGCTCCGTCTGAAGATGTTACACATGGCGAAAG
TCCTACCACTGCACAATACAAGAAACTGATGATAAATCGAGTACTCATTG
ATGCTTTCTGTGAACTATTAGAATGGGATGACTATTATGAAGTCCCTGAG
ACATTGGTTATGGATTACAAGCGTATCGTTAGTATGAGGGATAGTTGTGA
ACGCMCTGCAGTCAGTACAGCTGTCATATTATCAGCTTTTAGTAATATTG
CGAATTTCATTGTTCCTGCTGATGCCCAAAATATCAAAATGAAAATAAAG
AAGGATATTGATGTATTATTACAGGATTTCTTTGTTGATGAGGATCTCAC
AGAAATTCTTCCAAGGCTAGGAGACCAAATTGTTAAAATCATTAACGAGT
ATCTTGTTGATCAGAAGAAAAAGGATCCACTGTCTGAAGATATTGTAAAA
ATGATTAAAGCCAATTTAAGCGAAATGGAGGATCCTAATCATCGTATTCG
AGATTTGGTACAAAAAAGAATTGTAGAATTCTGTAAAAGASCAGCCACTG
GATCTAAAAACACTCAACTTCAAGTACCTCCTGGTCTAACTATATGTCAA
CAACAATTGGGAATGATAGCCGGAGCTTTTGTACAACTAATTTCCTACAA
TAGATCTGTGTTTGGTGAAACATATGTAGATCTTATTGAGAATCATGTAC
TTTTTAAGGAAGATGAGAAGGAAAACAATAGCTCAAGTAGAGAATCTCGG
CCAATCGAGGCTTGA
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