EMLSAT00000006783, EMLSAT00000006783-702630 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006783
Unique NameEMLSAT00000006783-702630
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s37supercontigLSalAtl2s37:767941..770265 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006783 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006783EMLSAG00000006783-689549Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000029782EMLSAE00000029782-738710Lepeophtheirus salmonisexon
EMLSAE00000029783EMLSAE00000029783-738711Lepeophtheirus salmonisexon
EMLSAE00000029784EMLSAE00000029784-738712Lepeophtheirus salmonisexon
EMLSAE00000029785EMLSAE00000029785-738713Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779630auto779630Lepeophtheirus salmonispolypeptide
EMLSAP00000006783EMLSAP00000006783Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006783

>EMLSAP00000006783 ID=EMLSAP00000006783|Name=EMLSAP00000006783|organism=Lepeophtheirus salmonis|type=polypeptide|length=427bp
MNGHQGLTSGDCWHCSLLSVQSFHLSATNMLQFSGYILPGVIFLILGLRW
ACHCLWDWSKKGLARDYERAALPVPSPNYQLCPASAYTLPWEGIIKLILT
GLGIVISVVLGGTPHQNRMEDYVGNIRHATIYLFFALSGLTDILVYYCGY
SILPEGIQSFILSVAFAIEGLIFSMRLRFESYLEQQIHILLVVDIFACAF
TSALEVLYDNKLIKFCRTYLCLVQGTWLIHGGFIVNGEDNTSTGASYPEA
LEWVSIIFGWHVAGNFILFVGSLLLIRAASKTDLFENFCCSFSLKMDQSS
LDTTLRTTPTMVISSSTSSSTSKSDTKFIPNKLSTNHHNATLRALPSLPQ
PRVHQHSHHQHYRPEVVYSTQRIDPPSASPPMIVEAIPKDNIGVSYDEDN
SLEEPYNTLAKSPDLRSSIKLKESSLI
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mRNA from alignment at LSalAtl2s37:767941..770265+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006783-702630 ID=EMLSAT00000006783-702630|Name=EMLSAT00000006783|organism=Lepeophtheirus salmonis|type=mRNA|length=2325bp|location=Sequence derived from alignment at LSalAtl2s37:767941..770265+ (Lepeophtheirus salmonis)
TGCTTTTGTGTTAATGGACACCTTATATACTAAAAAGGCTCGTTGAGTAT
GTATCTTTCTACACATTTTTAAGAAAGGGAAATCTTTTTTCCACTCTCAT
GTTTTGTTTCTTACTTTTTTCATATACCTATAATTAATATATGAAGAGCC
GGACTTACATAGATGGATACAAATTACAAGTGGTCATTAAAAACATTAGA
AATGAGGCCTATTTCAAACACCTCTTACAATGCGGGATACAACCATAAAA
CGTAATACGACTGACTAAGGTGTCATTATCATTATACATAGTTTTCATAA
ATTACACTTTATTCAGTTCAGATTTCCAACTCTTACTTCTTGAGGGAAAC
AAAAGTTACTTAATTCATAAATGGGAATGTTTCATTTTCTGCCTTGTAGA
ATAAATCTTATGCATTTTTTGTACATGTTGCGCAAACGTTATTTATTGGA
GGTTCTAGGTTTATCTTGTTAGATAAAAATCTAAATGGGCTTCATTATAC
ATACTTGGAGTTGCGAAAGGAAAAGAAAAGATTTTGAAACCTAGAGTACA
TCCACTCTTTGTAATAAAAACTATTGATACTTGATCATTATACGTATAGA
ACTCTCTACAAAAAAAAATCATACTTTTTTTGAAGAAGTATTTAAATATA
GATAAATATCTGATATTATTTTTTCCAAAAAATCATTCACAAAAAGATTC
ATTTACTTTTTAAAAGCCTTTAGGGTCTATCTACATCAACTTCTTTTTCC
TTGACTAAAATAGCCAGTAATTATAGACTTATATATCCATTCCTTAATGG
TAATTAACACGAATATGTCGTAATTATGATATGTATGCCTTGGAAATTCA
TAGATTTCTTTTATTTTCAGTCATAGTGAGGGACCATGAGAAGAAATGAA
TGGTCATCAAGGCCTGACTTCCGGAGATTGCTGGCACTGTAGTCTCCTAT
CCGTTCAATCCTTTCATCTATCAGCAACAAACATGCTCCAGTTTTCAGGC
TATATACTCCCCGGAGTCATTTTCCTCATTTTAGGACTCCGATGGGCATG
TCACTGTCTCTGGGACTGGTCAAAAAAGGGTTTAGCTCGGGACTATGAAA
GAGCAGCTCTTCCCGTGCCTAGTCCAAATTATCAGCTTTGTCCTGCGTCT
GCCTACACGCTTCCTTGGGAAGGGATCATCAAGCTCATACTCACGGGATT
GGGKATAGTTATCTCTGTTGTCTTAGGAGGAACTCCTCATCAAAATAGAA
TGGAGGACTATGTGGGGAATATTCGACATGCCACCATTTATTTATTCTTT
GCTCTCAGTGGCCTAACAGACATTCTTGTTTATTATTGCGGTTACTCAAT
ACTCCCTGAAGGGATTCAAAGTTTTATTCTGAGCGTTGCATTTGCAATTG
AAGGACTTATATTTTCAATGCGGCTTAGATTTGAATCATATTTGGAGCAG
CAAATACATATTTTATTGGTTGTGGATATATTTGCCTGTGCTTTCACCAG
TGCATTGGAAGTGAGTTTCTAGGTACTTACATTTTGATTTGACGATAAAT
TTTTTTATTTTATTACATTTGTTAGGTTTTGTACGACAATAAACTCATCA
AATTCTGCAGAACATACTTATGCCTTGTTCAAGGAACATGGCTAATTCAC
GGAGGTTTCATTGTCAATGGAGAAGACAATACTTCTACCGGAGCCAGCTA
TCCGGAAGCTCTTGAATGGGTATCAATCATATTTGGCTGGCACGTTGCAG
GGAACTTTATACTTTTCGTTGGATCTCTACTCCTAATACGTGCTGCCTCA
AAAACAGACCTCTTTGAAAACTTTTGCTGTTCCTTTAGTCTCAAGATGGA
TCAGAGTTCCCTGGATACGACGCTTCGCACAACCCCTACCATGGTCATAT
CCTCTTCCACATCCTCATCTACATCCAAATCTGATACAAAATTCATACCA
AATAAACTTTCCACTAATCACCATAACGCCACACTACGAGCTCTTCCCTC
TCTACCTCAACCCCGCGTCCATCAACACTCTCACCATCAGCACTATCGTC
CAGAAGTTGTGTATTCCACCCAAAGGATAGATCCCCCCTCCGCATCACCC
CCCATGATTGTTGAGGCTATTCCTAAAGACAATATAGGTGTATCATATGA
TGAAGACAATTCATTAGAAGAGCCCTACAACACCCTCGCTAAAAGTCCAG
ATCTTCGCTCATCCATTAAACTCAAAGAAAGCAGTTTGATTTAACAAGTG
TTTTATATATTTTAAACCTATAAGTATATACAATAGGTGCTCGTTTTCAA
AAAAATAAATAAAGGTTTAAAAAAA
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