EMLSAT00000006883, EMLSAT00000006883-702730 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006883
Unique NameEMLSAT00000006883-702730
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s389supercontigLSalAtl2s389:598697..599345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006883 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006883EMLSAG00000006883-689649Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030231EMLSAE00000030231-739159Lepeophtheirus salmonisexon
EMLSAE00000030232EMLSAE00000030232-739160Lepeophtheirus salmonisexon
EMLSAE00000030233EMLSAE00000030233-739161Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778813auto778813Lepeophtheirus salmonispolypeptide
EMLSAP00000006883EMLSAP00000006883Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006883

>EMLSAP00000006883 ID=EMLSAP00000006883|Name=EMLSAP00000006883|organism=Lepeophtheirus salmonis|type=polypeptide|length=132bp
MSIIYQVIGIMYKLLIVFAVLSVAIADKPYAPTYKEPELPPQPFAYQYGV
KDDYTGTNFDKNEEQDAYGNLKGSYRVNLPDGRVQIVKYTVDAVEGFIAD
VQYEGEAQYPPEPKEGYGNSGPVYKSKPTYSA
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mRNA from alignment at LSalAtl2s389:598697..599345-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006883-702730 ID=EMLSAT00000006883-702730|Name=EMLSAT00000006883|organism=Lepeophtheirus salmonis|type=mRNA|length=649bp|location=Sequence derived from alignment at LSalAtl2s389:598697..599345- (Lepeophtheirus salmonis)
ATGTCTATTATCTACCAAGTACGTACCCGACTTATATATGTATATATTTC
TTACTTTCTTATAATTATTTATAATTTTTTTTTTTTTTGTTTGGCGTAAG
GACGTCGAACATGAGAGCAGTCGAGCACAATAATTAGTAGAAATTTACCA
AGAACTATAAAAACCCAAGTCGTACTCCGATTAGGTATCAGTTTATCATC
GTCCTAGGTAATCGGAATCATGTATAAGGTATGTAAATAAATAGTTGACT
ATCCATCTGAATATATTTAATAATAATATGTCCTATCAGTTACTCATCGT
TTTCGCTGTACTCTCTGTGGCAATCGCGGATAAACCCTATGCTCCAACAT
ACAAAGAACCTGAACTTCCTCCTCAACCTTTTGCATACCAATATGGAGTG
AAAGATGACTACACCGGTACCAACTTTGATAAAAATGAAGAACAAGATGC
CTATGGAAACCTTAAGGGGAGCTACCGGGTCAATCTTCCTGATGGCCGTG
TTCAAATTGTAAAGTATACCGTTGACGCAGTTGAAGGATTCATTGCTGAT
GTTCAATATGAAGGGGAAGCACAATATCCCCCTGAGCCCAAGGAAGGGTA
TGGAAACTCTGGGCCAGTTTATAAGTCCAAACCTACATATTCAGCATAA
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