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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s389 | supercontig | LSalAtl2s389:81769..89252 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006886 >EMLSAP00000006886 ID=EMLSAP00000006886|Name=EMLSAP00000006886|organism=Lepeophtheirus salmonis|type=polypeptide|length=490bp
MGIFTSLGGESHPPTPPPLRAVKLTPRETTEKIKDALKKVKLQADKLSLE
REQHMKDNLASHDSAIRKCKNIPVERKYSGFNYMNLQQNRIKRSPLDHGS
KKNLPCTLHCPGSYGLLPNLTCVSCQCLFHARCQGMTQANRLFKTFKCKA
CSLLSNRNSNPLASSSHSSPSSSTPVRSFTVGQVNSIVNVKLPMTNPNGR
RPIVELVMHQNGKYQPIKFSNNMQVSEMISKTIFERATTLQRTLYQKARK
VPRVNGRPIFLAINPTTQNNRGQLNALFSSAQLSRQSNSVPSLVSSSTSE
VHKSDQVSILVRSQSSPKPVLLNVPRKIAIKVKAGTTLSFSASSDQKYTV
IDSKIHPPVNSSKRSATSSTTTTNSVPVPKRRAPDLTVYRGITISRITDK
RPPQPTRRIPPPAPAAGHKVSSELEINPCTPYCPGVTGFPEVECKGCQSL
FHAQCVGLLNSRSMSNFYCKMCSRTPTSIPRSTPQVINLD back to topmRNA from alignment at LSalAtl2s389:81769..89252+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006886-702733 ID=EMLSAT00000006886-702733|Name=EMLSAT00000006886|organism=Lepeophtheirus salmonis|type=mRNA|length=7484bp|location=Sequence derived from alignment at LSalAtl2s389:81769..89252+ (Lepeophtheirus salmonis)
TGAGACTGAGAGAAAAAGATACAAAATCAAACATTGGGAAGAGTATAGAG
TTCATAGTTGAGTTAAAAATGTCTTGGTGTGCAATCATAGGGTGCTCAAA
TAATACTAAGAAATGCAAAAACTTGGACATAAGTTTCCATCTGATCCCAA
AAGAAGAAAATTTGAAACAAGTGTGGATTGACTGTATTCAGCGAGGAGGA
AATTTACCTAAACGCATTTATTTGTGTTCGGATCACTTTGCCGAAGAATG
TTTCGATGCATCCTCCAAGCTTCAAATGCGAATAATGGGGTATAAGAAGA
AACGTATTTTAAAACCTGGAAGTATACCCACGATCTTTAATCATATGTTT
AATAGACAACGAGAATTAGATGTGTTTGCTCATCGCAGTAGGACGAGCTA
TGTCAACCAGGTATTATTTATTAATATAATCTATATATTATATTTATAAA
TAAAGCTGTAGGTATTACAGCTTCTATCTACTGTTGTCAGTTTTATGTAA
TAGTTATTGTACTGTAGGTACTTTTAAATCATTTTTTCTTTATTTACTTC
TTCTAATCTTCTTTCTGACGATAGATTGGTTATGTTCTTCAACTTATTCA
ATTCAATGCATAAGATATCGTTTAACTCTATAACGTCCACTAAATTAATG
CATCGTCAGAATGTATTTATTTTTTGAAATTTGAATCCTTGTTCATTTCT
AAAAACAAACAAAAATCAAAGATTTTTTGGTTATAAATTTGTTTAATTCA
AACATTGGAAAGCCAAAAATGAGTGTTTGTTCTGTCTAATAATCCATTGG
TAGTATATTTGTCATTGCATCCACGAAGTTTTTGAGCCTAAAAAAACATT
GTAACTCCTCAAATCGAGGATTCCAAAACTCATGTATCACAAATGATACC
TTACAACTTGAAAAAAATAATATAGTTCTTATGTACTCGATGGTCGTCCA
CAATCTTTTCATTTCATCATTTTCAAAAATTGACAACCTGTTATTTTTTA
TGGAGAGACCATTTTCTTTTATATGGTTAGAAAAATTTTGTAACCAGAAA
ATTCAACTTTAAATAATGCAGAAAGTTAATTATTTTACTCATCCTTTTTA
AAAAGAAACTATGAGTAAAAAATGGTACTTTTTATATTTTACTGGTATAC
AATATTTTTACTGATCTTGTCACAGTTTCTTGTTTTTGATCATTTAAGGA
GTGTGCTCAATGATTTGCAGTTCCCCCTGCCTGTTTTTTCAAATATTGCC
AAAGTTAGTTTTTGATTTTCCTCAGAAGAAAAGGACTAAGTGCATATTAA
ACCCTAAAATGGGACAGTAATTAATAGCTGATTAATATTGGAAATAATGG
ATTTTGAAGTGAAATGTTTGAAATTAAATTAATGCTGTTCGGAGCGGGTT
ACAAGTATCTACGCATTTTATTACAGTCTAGTGGGTAAAAAATAATAATG
TTGTAATGTAAGACGTGACCCTCATCGTTTCATTTGGTACCAGCAGATTT
ATTTGATTTCAATCTATAATTAGTTTGTAGTATTTCTATTTGAATAAAAA
GTTAAATAATCCCACTCAAGAATTGAGAATACACTGTTAATTACTGTATC
GACGCTTCCCCTCAACTCATTAAAAAACATTAGCATATCAATAATTATAA
ATAATTGGAACACCTGTTGCATCATGCTGAAACAGATTAGTTTTTTTAAT
TAAATTTTTAATATGTTCATTCTTTTGAATCAAGAGATTGTAAAATTTCC
TCTTTGGGGGAAAGAGAGAAGAAGTCTTCACTTGAACATCATACGTCATG
GTTTGTCATTGAGGACCTATAAGACTATTGAAGGACTTTCTCTCTTATAT
ATGTATACTCTTAGAATATCCTTATTTAATTAACTATTTCGTCTGTGTGT
GATTCTAAATGCTATAAGTAACTGTTTCCTCCTTTGAGCATTTCGTTATC
ATTGACAATATACTTTTGATTCTTTATGGTTTCATTACTATTACTACTTA
TTTTGTTATAAGAAAAAATTATTTAATCATTTTTAGTTGAAAAAATGAAA
CGAATCAGTTTCTCACACGTTACATGTTTTTAAATAACTCGCAAATAATG
TTATTGAAAGTGGTACAGTCCATCCCGGCCCTCCCAACATTTACATTTGA
AGTAATGAGAAGTACCTAGTCTAAATTAGGTTTATTCTCTTGTGTAATAG
AATGACAACTTGTATTAAGGGAATGAATGATGATGCTCTTAAAAAAATCG
ATTTCATGCGCAAAAAAGGGATGTGTGAGCGGCGTGAATGGGATAAAATG
AAGTAACTCCTTGAATGATAAGTAACCAGAGGAGACCAACCAACCCTGAA
AGAAGAAGGTAGCAAGCTGTGTCGTAGTGATTAGTGAAGAAAATAGATTA
GCAGTCCCTCATAGCAGCAAAGCAAACATTGCACTAATTGTAGATGTGAG
GCGATTGGGCGTGCTAAGTGGGAAAGAAGAGGAGCTTTTTCTCTTTTTAA
TAGATACTTCTTTCTCTCTCTCTTTGTTTGTGTATCTGCTTGTGTTTGTG
TGTCTCTTTTCTAAATATTTTTTTTTCTCTCTTTTTCCCTTCCTTCCTTC
CTTTCTCTCTCTCTCTTTTTATTGTTATTATTCCTCGACTGGCCCTTTTG
TATTTCTATCTGATTTCTGTTTCATCACTACTGATTAGTGGGCATCCTTG
AGTGAGCGGGGATCAGAGATGGAGGGAGTGAAGGAGAAGGAGCCTGACGT
GATGGTTCTCTCTGGGGACGAAGATGAAAGCGAGGAGGAAGAAGAAGAGG
AGGAGGAGGAGGAAGAAGAAGAAGAGGGTATTTCCTGCGAGGATGAAGTG
AGGAAGGAGCGAGCTCCCGGGATGGACGCTCTACACCCCATTGAGTCGAC
TCTTTTGGCGCCATTTCTGGAAGGGTGGAAAAGGGAATGTGTGCTGCGAG
CAGGGTCCGAGGACTGCGACATCTACTATATCCCTCCCAAGAGAGATGGG
GGAAGTCGAGAAACGCATCGGAAGAAGCGCTCCAAAAGGTAGTTGTTTCT
CTTGTTTGATTGAGGAGTCGTGAATTGTATTTGAATCTCTTTGTACTTTC
TAGGGATATTATTCGGCACTTTGACGAAATTCCAAGCACTTCCCTCTCAG
ACATTAATTTCAGCTATGTTTGCCGTCCCCTCGGACTCAACAACTCAATG
TATGAAATCGTGCGAAGTCCTCGTGATGGGCTGCGAACTCAACCCAAGAC
TGTTGTCCATTKCAATGKCTCCAAACCTGCGACTCTCTCCTCTGATGATG
AGGATGACGACGACATTTTGGAAGKGTTCTCCATGGAAATCCCTATTGTT
CTTCAAATAAAGCGCTCCATTATTGGTATGAAGGCAGAGTATAAAAAAAG
AAGGAAAACGCGTACAGTGGAAAGGTGCCAAACTCCATTTATGGNNNNNN
GAAGCTAAATGGACCAATCTTGATGATGATCCTATGGGGATTTTTACCTC
ACTCGGGGGAGAGTCTCATCCTCCAACACCACCTCCTCTTCGTGCAGTGA
AATTAACACCCCGTGAAACGACCGAAAAAATAAAGGATGCTCTCAAAAAA
GTTAAGCTACAAGCAGATAAACTCTCCCTCGAAAGGGAGCAGCACATGAA
GGATAATTTAGCATCACATGACTCTGCCATTAGAAAATGCAAAAATATCC
CAGTTGAGAGAAAGTATTCAGGGTTTAATTATATGAATCTACAACAAAAT
CGTATTAAGAGATCACCTTTGGATCATGGCTCAAAAAAGAATCTTCCCTG
CACTCTGCATTGTCCTGGATCCTATGGTCTTTTACCTAATTTGACCTGTG
TATCCTGTCAATGCCTATTTCATGCTCGCTGTCAAGGGATGACTCAAGCA
AACCGACTTTTTAAAACTTTTAAGTGTAAAGCTTGTTCCTTACTCAGTAA
TCGCAATTCTAATCCTTTGGCATCTTCGTCACATTCATCKCCTTCCTCTT
CCACTCCAGTGAGATCATTCACCGTAGGACAAGTGAATAGTATAGTGAAC
GTTAAGCTTCCCATGACAAATCCAAATGGAAGGCGTCCTATTGTAGAACT
AGTGATGCACCAAAATGGAAAATATCAGCCTATTAAATTCTCTAATAACA
TGCAAGTAAGTGAGATGATATCAAAGACAATTTTTGAGAGGGCCACCACT
CTTCAGCGAACACTTTATCAAAAAGCTAGAAAAGTTCCTCGTGTAAATGG
AAGACCCATTTTTTTAGCTATTAATCCAACCACTCAAAACAATCGGGGGC
AACTCAACGCTTTATTTTCTTCGGCTCAGCTAAGTAGACAGTCTAACTCT
GTTCCTTCGCTGGTCAGTTCGTCTACATCAGAGGTACATAAAAGTGATCA
GGTTTCTATTCTTGTAAGATCTCAATCGTCTCCTAAGCCTGTTCTACTTA
ATGTACCTCGAAAAATTGCAATAAAAGTCAAAGCTGGAACTACTTTGTCA
TTTTCTGCATCTAGTGATCAAAAATATACTGTAATTGACAGTAAAATTCA
TCCTCCAGTCAATTCTTCAAAACGCTCTGCAACTTCTTCTACTACTACTA
CTAACTCTGTTCCTGTACCTAAAAGACGAGCTCCTGATCTCACCGTCTAC
AGAGGTATTACAATATCACGTATAACGGATAAACGCCCTCCACAACCTAC
AAGGAGGATACCKCCGCCTGCTCCTGCAGCAGGACATAAAGTGTATGTGA
TTCCATTACTTTTGATAAACCAATTTATTTATTTTTATTTTTGTCCAGGT
CATCTGAATTAGAGATAAATCCTTGTACTCCATATTGTCCAGGTGTTACA
GGCTTTCCTGAGGTCGAATGCAAGGGCTGTCAGTCCCTTTTTCACGCACA
ATGTGTTGGCTTACTGAACAGTCGATCAATGTCAAACTTTTACTGCAAGG
TTGGTTTTACTAACAAATAAAACATAATTACTATATATTTTTTTCCCTTA
TAGATGTGCTCAAGAACGCCAACTTCCATTCCAAGAAGTACTCCTCAAGT
TATAAATTTAGATTAGACATATTATCGCAACTTGTCTTTTTTTTCTTCTT
CTAAATAACAGAAGTATTTCATAGATCTGTTTGGGCACATAGCCTATGTT
AACATCGTTGATATTTTTGTCCCCTCCTACAAAATGGGTTTTAATAGTTT
CGATTTATTTATCATTGGRTATCCATTACCAATGAACTTTTTAATGGATT
TCATTATGATTATTGTGCATTCTGTCACATACTTTTTTTTTTTGTTGTCT
CATATAAGTGGTATTATTAAAGCGAGAATATATTTATACTTGTAAATTCC
GAAATAAATTTATAATTTTAGTTCTTCAGGTATTTGTTGATAATTTCATT
TTCAAAAAAACCTTTTGGCAATTCGAGATGATCTCCATTAACGGCTAAGA
AAACCAACTTTCCTTGGTCCTTCATTGTTTTGAGACCTAAACGATCTTCT
TTGAAAAGTTCGGTTTCCTCAAGAGGTATAGTTTCATTGCTAGAGTTTGG
TTTGAAAAATCCAAAGTGAGAAGATACATTTGGATCCACCATGGTGTCAT
TATTGAATTTAATCATCACAAATTTTTCTAACGTATTTAAATTTGTCTTA
TACTCTTCAATTATTTCATTTTCGTTATTGATCCCAGCAAGGAAAATGCT
ACTATCTTTATACGTGTCTTCCTTCAAGGGGTCATGCCAATACTGTGCTT
GGACCAAGAGGTGCTGTATCCAAGGTGTGTACGCTCCATAACTTAAAAGT
TGTCGAACATATTCGCAGATTTGAAAATGTTTCCCACTACAATGAGGAAG
ACCTTGGAAAAGAAAAAACGTTTAAATTATAGATCGGAAATAGTATATGT
TCATACCAAAAATTCCTTGATGCTGTCCCCCAATGGAAATTAACTTCTTC
ATACCTTGAGGGCATTTCTGAGCAACAGCTCTGAGGAATTGAGCACCTTG
AGAAAATCCAATGGAATTGTACCCATTTTTTAAATTTTCGTCTTCAGAAA
TTTGCTTGCAGACATTATCAACTTGTTTATTGGCATTTTTGAAAAACCCA
TTTTCAACGTCCTGCATTACGTTATTACCAATCATTAATGACTTAACATA
GATATCTGGTATTTCTCTTTCAATGACTTTTTTCACAGAGCCCATACTAA
AAGGATTACAACAACTGTCACCCATTCCATGCCATAGTATCACAGGTGTG
GAGTTTGAAGAGGCCTGGGTGACTACGGAAAATGCAAAAACAGCAAAGAC
ACCCGTCCAATTCGTCATTTTGTATCTGTAATAATAAGTTTCAATTGGAT
TGATATAAATTGGTAAATATTAATAATTATAATCCTTATTTTTGTGTAAT
TATTATGAATTTTTATCTCATTATTTACGTAAGTAGCTAAATATTTGTAT
AGTAAAAATTGTTAAAGATATGATTTCATAAAGTGATCAGATGATTATAT
TTGCTAATATTCATAAGATGATAAGAGGGTTGGACTTTTGTAGTTATCAG
CATAGGTTAAGAGTGAAGCAAAATTAATGTATCTTTCATTGTTCTTTACC
CTACTAATTATTTTTAACTAGATTTATTACAAATACGCAACAATAAAGCA
AATAATATCAGTAATCAGCAATGTCGACTTTAGAAATGTGTCAAGGGTCT
TTGATGAAATACTCAATCAAAAAAGCCTCTTATTTTTGAATTTATGTAGA
CTGTACAGTGCCCGAAATCTAGAAGACTACACCCTACCCCACTTGAAAGA
CATTCAGTACCGGGAAAGTAGATATTGATATAATAATAATATTTACCAAA
AATTATAAAACTTCGTCAAGGGAGATGGAGAAAATTAAGGATGAGGAATT
AAGTAATGATGGCCACAAAACAAATTCAGTAATGGGAGTTTACTGTCATT
ACTCCTCTGATTAAACTCAAACAATTGTAGCTATTTGGATGATAAATAAT
TATTACACAATCAATATAGCATGAACAGTCCAAAACCTGAAACAAAGAGC
ACAAAAGCCATATAGACTATTAATTAACCTAGCTCATTTAATCAACATGA
ATCCTGAAATATGTAGTTATATATAAATTATCCAACCATTTAAAAGGTAT
ACAGTAATTGAAATCTTAAATGATAGCGCACTTTCAGGACCAAAGAAAAT
ATACAAAGCTTTAAAAGTAACGCGTCTCCCAAATGAAAGGCATGAGTAAT
AGAAAAGAAGAAGAAGTTATATACATAATTAAAGGTAGATATTTTTTTAT
ACTTTATAATCAGTTGATGAACTCAGTTATAGCTGTTTAATGGACTACAA
AAGAAGGCAGCTAATTCATCTGATGAGATGAAGTGTTCTCTTATATATTT
TCTATGGCCAGTCAAAACCATTAAAAAAAACCATATATGTATATAAGTTG
TGTTGATAAGAAACTTGCCGCGTTGACGTTAGCT back to top
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