EMLSAT00000006888, EMLSAT00000006888-702735 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006888
Unique NameEMLSAT00000006888-702735
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s389supercontigLSalAtl2s389:94079..95736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006888 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006888EMLSAG00000006888-689654Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030247EMLSAE00000030247-739175Lepeophtheirus salmonisexon
EMLSAE00000030248EMLSAE00000030248-739176Lepeophtheirus salmonisexon
EMLSAE00000030249EMLSAE00000030249-739177Lepeophtheirus salmonisexon
EMLSAE00000030250EMLSAE00000030250-739178Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771958auto771958Lepeophtheirus salmonispolypeptide
EMLSAP00000006888EMLSAP00000006888Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006888

>EMLSAP00000006888 ID=EMLSAP00000006888|Name=EMLSAP00000006888|organism=Lepeophtheirus salmonis|type=polypeptide|length=261bp
MNAEMKTNIPRFNLLRELIIRACLTALFHYTDYLDPFQRIILINEAKELY
GFPHLKSYVTGSDLISITIFIPTLTVLGVYYFKKDVKDLIIAVLTFTLII
PVTGLIVNVIKLSVGRPRPDFISRCWPLGDIPWSEFDDVRENQELSCTGD
SELVAEGRKSFPSGHSSLSFAVFTFSFLYVAGKLKTFNFVHKPKSIQSLS
LIVAFAQVLVPSIIAISRTCDYHHHWQDVVIGSGIGSLISFVIYNHYFYS
IFSEQSNISRM
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mRNA from alignment at LSalAtl2s389:94079..95736+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006888-702735 ID=EMLSAT00000006888-702735|Name=EMLSAT00000006888|organism=Lepeophtheirus salmonis|type=mRNA|length=1658bp|location=Sequence derived from alignment at LSalAtl2s389:94079..95736+ (Lepeophtheirus salmonis)
CATTTTATTAAAGCACAAAGTGAAAGTTGTGTTATTTACAGGGGTATTAA TTTAGTACTAAATATCATTATAAATCATAAAATATAATTATCTCATATCT GTGGTATAATTTACAGTGATGAAATTTTAATAGAAAAATATACTTAACTT TCAAGTTTCACGTCATTAACATAATAATTTTATAATGAATGCTGAGATGA AGACAAATATTCCACGATTTAATCTCTTGAGAGAACTTATAATCCGTGCC TGTCTCACAGCGTTATTTCACTACACAGACTACTTGGATCCGTTTCAACG CATTATATTAATTAATGAGGCTAAAGAACTCTATGGGTTTCCTCATTTAA AAAGCTACGTTACAGGGTCTGACTTAATCTCTATAACCATTTTTATTCCT ACTCTAACAGTATTAGGAGTTTATTATTTTAAGAAAGATGTCAAAGACTT AATTATTGCAGTTCTTACATTTACTCTGATTATCCCTGTAACTGGACTAA TTGTGAACGTTATAAAGGTAAATATACATACATAACCCGATAACGGATTT ATCGAAATTCGAATGACTTTAAGTTATGTTATATTCATGTACTTTTAGTT ACAATTATGCCAGTAATGTATCAAACAACCGCAATTATAATCCTTAGTTA AGAAATTTATTCTAATCTTACATTTCTATATAGTTATCTGTTGGAAGACC TCGCCCTGACTTTATATCTCGTTGTTGGCCATTAGGAGATATTCCATGGT CTGAATTCGATGATGTGAGAGAAAACCAAGAATTATCATGCACTGGAGAT TCAGAATTAGTCGCTGAAGGACGGAAGAGTTTCCCTAGTGGCCATTCCAG TTTGTCATTTGCTGTTTTCACATTCTCGTTCCTCTATGTTGCTGGAAAAT TAAAAACGTTTAATTTTGTACATAAGCCGAAAAGTATTCAATCATTATCC TTGATAGTCGCTTTTGCACAAGTACTAGGTAATTTAACAGTTTTGTAGAT CTTTGTTTATAGATTGTAACAAAAGTTTAGTTCACATTTTGTAAATACAG GGGTGTCCGCAGGAATATATTGGGGGGGGGGGGAGGCTAGATTTTTGGAT TAAAAAAAAAAATCTATAGCTATTCATAAAAAATAGCAAATATAAAATTT TTGGCTCTGCATCGTAATTTTCCCGAATGACGAAAAAAAATTCTTATAAA AGCAAAAATTTCTTAATTTGGTGTGGTGGGCTACAGCCCCTCCAGCCCAC CCCCTCCAGACGCTACTGAAATATCTTTATTTCTCAATTCTTTGAAAAAT TGTCAAATATCAGTTAATTATTCATTTTTGTTATAGTTCCGTCTATTATT GCCATTTCTCGTACCTGCGATTATCACCATCATTGGCAAGATGTCGTAAT TGGCTCTGGCATAGGATCTTTGATTTCATTTGTGATTTATAATCATTATT TTTATTCTATATTCTCTGAACAATCCAATATTAGTCGGATGTGATACTTA TATTTTATAATTATTTGCTTAGTTTGAATATTATATGTCTCAACATAATG GTGTCTATTACACCTTTTTTTGCACAATGATAAGTATGATTAATTCAATA TTTATTTTAGTAATCAATTAATCATGTTACTATGTTAATATTAGTTCTTT AGTAAGCC
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