EMLSAT00000006916, EMLSAT00000006916-702763 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006916
Unique NameEMLSAT00000006916-702763
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s391supercontigLSalAtl2s391:517015..519587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006916 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006916EMLSAG00000006916-689682Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030388EMLSAE00000030388-739316Lepeophtheirus salmonisexon
EMLSAE00000030389EMLSAE00000030389-739317Lepeophtheirus salmonisexon
EMLSAE00000030390EMLSAE00000030390-739318Lepeophtheirus salmonisexon
EMLSAE00000030391EMLSAE00000030391-739319Lepeophtheirus salmonisexon
EMLSAE00000030392EMLSAE00000030392-739320Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778322auto778322Lepeophtheirus salmonispolypeptide
EMLSAP00000006916EMLSAP00000006916Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006916

>EMLSAP00000006916 ID=EMLSAP00000006916|Name=EMLSAP00000006916|organism=Lepeophtheirus salmonis|type=polypeptide|length=580bp
MASLAAEETSSLEKSGKLPCVALCKVEEKEVHPHMLDLVSRRSSPLPLVF
SYSQVESNIMYYIAQNKHSPYVILFSQGEQSYLLLIPERSVSLLPPPGPS
WAHLSLYYPKKTLKLCSLLLGNKEVEAXVPFNLDDFLGCVVNKRLIFLPQ
LKIKDLCHSNRLITGKPLISHVVSKNGLQVYDIDLNKRPIHVHLFHHLND
VSCVLKMSTRKKTLRHLRLFFLHFNYNLNTKKLESIIYHKSKGIEIKYIQ
AFLNVMKEIIRKSKGIVKFNLPSLTLINDPSQSIESNEQKLDNICSITKC
PNEKPPSPSQSATSPPSFNYLDCDVPIASGRFFCPKCYGLKISYESIIDH
LIQVEYKNELRAYVSSFYSSTQNKCVRSGCSKELSEEEMIQHIGLDHEVV
IELFLKESKDAIKPCLIKDCSFVTLGIESVINHMIFIHYYENINQEIQWI
QKSNSLSANQCPFYECQDFVMQDQLFLHYALEHGAYAHFMKRPWINDIEL
LAHYYEYMFFGHIKNKFRPRFVCDLLLCHNGLYFYNYWSYLLHLGISHYQ
DKLKYEMGKNRAGKCSYNVCGFSSSDTRIQ
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mRNA from alignment at LSalAtl2s391:517015..519587+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006916-702763 ID=EMLSAT00000006916-702763|Name=EMLSAT00000006916|organism=Lepeophtheirus salmonis|type=mRNA|length=2573bp|location=Sequence derived from alignment at LSalAtl2s391:517015..519587+ (Lepeophtheirus salmonis)
TTCCATTCTGACGTCGTATAAAAAATATGAATGCAAAACTCGAAAATGGG
CTGACCGACAACCTGCATATTGAATGAATCCATCCTCCCGATTTTTGAAA
TGGCCTCGTTAGCTGCTGAGGAGACTTCTTCCCTTGAGAAAAGCGGAAAA
CTCCCTTGTGTAGCGTTATGCAAAGTGGAGGAGAAGGAGGTTCACCCTCA
TATGCTGGATCTTGTGAGCAGACGGAGTTCTCCGCTTCCACTTGTCTTCT
CCTATTCACAAGTGGAATCCAACATTATGTATTACATTGCACAAAACAAG
CACTCTCCCTACGTCATACTCTTCTCTCAAGGAGAGCAATCCTATTTATT
ACTCATACCAGAGCGGAGTGTGTCACTCCTTCCGCCTCCAGGCCCCTCTT
GGGCTCATCTCAGTCTATATTATCCCAAAAAGACCCTTAAACTATGCAGC
TTACTCCTTGGGAATAAGGAAGTGGAGGCTCMTGTTCCCTTTAATTTAGA
TGACTTTCTGGGCTGTGTTGTGAACAAAAGACTCATTTTCCTCCCTCAAC
TCAAAATCAAAGATCTCTGTCATTCCAATCGACTCATCACAGGCAAACCC
CTCATCTCACATGTTGTGAGTAAAAATGGTCTTCAAGTCTACGATATAGA
CTTAAATAAAAGACCGATCCACGTACATCTATTTCATCATCTCAACGATG
TTTCATGTGTTCTCAAAATGTCTACGCGAAAAAAAACTCTGAGACATCTA
AGACTCTTTTTTTTACATTTTAATTATAATCTCAACACTAAAAAGCTGGA
AAGCATCATTTATCATAAATCTAAGGTAGTGTCTCTAGTTTCAACTCTAT
TAAATCGACTGATTAATTCATTTTTTGCAGGGGATTGAGATAAAATATAT
ACAAGCATTCTTAAACGTAATGAAAGAAATCATTAGGAAATCCAAAGGTA
TCGTTAAGTTCAATTTACCTTCACTCACACTCATAAACGACCCATCTCAA
AGTATAGAATCCAATGAACAAAAGTTAGACAACATTTGTTCAATTACCAA
GTGTCCTAATGAAAAACCTCCTTCCCCATCCCAAAGTGCAACCTCACCAC
CATCCTTTAATTATTTAGATTGCGATGTTCCTATAGCAAGCGGTCGATTT
TTTTGTCCTAAATGCTATGGACTAAAAATATCTTATGAATCAATAATTGA
CCATTTGATTCAAGTAGAATATAAAAATGAGCTTCGTGCTTACGTAAGTT
CCTTTTATAGCTCAACTCAAAATAAATGTGTTCGCTCTGGGTGTTCAAAA
GAATTGAGTGAAGAGGAAATGATTCAGCACATCGGTTTAGATCATGAGGT
TGTCATAGAATTATTTTTAAAAGAATCCAAAGATGCCATCAAACCTTGCT
TGATAAAAGGTAATTAATCAACTTTAATAGAATAAAACAATTATGTTTCA
TAATTATACTAAAATTGTAGATTGTTCATTTGTTACTCTTGGGATCGAAT
CTGTAATAAATCACATGATTTTTATACATTACTATGAAAATATTAATCAG
GAAATTCAATGGATCCAAAAGAGTAATTCCTTGTCAGCCAATCAATGTCC
GTTTTATGAATGTCAAGATTTTGTAATGCAGGATCAATTGTTTCTTCACT
ATGCTCTTGAACATGGAGCATATGCTCACTTTATGAAGAGGCCTTGGATC
AATGACATAGAGCTTTTGGCCCATTATTATGAATACATGTTCTTTGGGCA
TATTAAAAACAAATTTAGGCCGAGGTTTGTAATTGTTATTACTCAAAAGA
TATTTTTTAATAGCTTCATTTTTTTTCTCCTCCAGGTTTGTCTGTGATTT
ACTACTTTGTCATAATGGGCTTTATTTCTATAATTACTGGTCTTATCTTT
TACATTTGGGTATTTCTCATTATCAGGATAAATTAAAATATGAAATGGGA
AAGAACAGAGCCGGTAAATGCAGTTATAATGTTTGTGGGTTTAGTTCATC
CGATACTAGGGTTCTTCAACTCCATATTGGTATTTATCACAATATCATTC
TCCGAATTGACTCGGATTTAAAAAAGAAACANGCACGATGATTTTGAATA
TATCCCATAATAATTTTTCTTCTGTCAATTTTTGAATTATAARTTCAGCT
TTGTTKTAKTGATGGTCAAACAGGATTTTATTTGTAGTTTTTTGACAAGA
AAGGATAGTTAATATTCAGAAAAAAAATCATTAAAGTGATTATATATATA
TATATACTTTAAAATTAAATTGATTGTCAGGGTCAGAAAGATTAATAAAG
GATTAAATAACTTTTTTTTAAATGATTGCACTGCCCAAGTTTGAGTTTTC
AATGATTAATTAAATTTTTTTAAAACATTAGCTTTTTTGTTATGCAGGAA
AGTATTTATTGGTAATAATTGGCAACTTGCGCCGATTATTGTTTGTTTTA
AAACTTACAAACTTGGGCAATTTAATTGGTTTGCAGATATATCGATCAGG
CCCTAAGATATGCTATGTTTTATTTTACGTAGTATTAAATAAATTATTCT
TATATTCTTTATAGATTCAATAA
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