EMLSAT00000006935, EMLSAT00000006935-702782 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006935
Unique NameEMLSAT00000006935-702782
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s393supercontigLSalAtl2s393:562990..566673 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006935 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006935EMLSAG00000006935-689701Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030478EMLSAE00000030478-739406Lepeophtheirus salmonisexon
EMLSAE00000030479EMLSAE00000030479-739407Lepeophtheirus salmonisexon
EMLSAE00000030480EMLSAE00000030480-739408Lepeophtheirus salmonisexon
EMLSAE00000030481EMLSAE00000030481-739409Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778609auto778609Lepeophtheirus salmonispolypeptide
EMLSAP00000006935EMLSAP00000006935Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006935

>EMLSAP00000006935 ID=EMLSAP00000006935|Name=EMLSAP00000006935|organism=Lepeophtheirus salmonis|type=polypeptide|length=188bp
MELSFVAVYLYIFILSLEFSVLQVSSTYHLPTPPSSFSIDTALRSLSKAV
FTHAILPNDSQIEEELRESSVQDTSECIKKLICIIHSIPSPERTWDERII
AEAISPKLVFKSQHIQLQLAARLGYAQPSQCYDVYSRCPFEKHQLMTLIR
QRGMSLNXPTSPDYDCTVIFLWKRKESKITFPSNDIDK
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mRNA from alignment at LSalAtl2s393:562990..566673+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006935-702782 ID=EMLSAT00000006935-702782|Name=EMLSAT00000006935|organism=Lepeophtheirus salmonis|type=mRNA|length=3684bp|location=Sequence derived from alignment at LSalAtl2s393:562990..566673+ (Lepeophtheirus salmonis)
AAACGGAAATAACTCGTCATAAAACATTTTAAAATACATACATCAAGAGA
GATTTGTAACTCTTCATTGTAATAAACAAATAATCAGAGTTCAAATGTGG
GAGGTTTCTTAATGAGTTAAGTGGGGGATAGGGATGCACATTAGTAATGA
GTCCAAGGATTACCGTATGCATCATGTACGTACAACGAACAATTTTATAA
GGAGCGGTCTTCCTCTTAAGACACAATGGTTTGGCTCATTACATAACTTT
TATGGTTTTTATTTTTGATTTCTGCAGAAATCAACGGGATTGAATTCCAT
TCGCAGTATGGATTTAAAAGAGAAAAAACGTGATACGTCAAAATGGAGTT
AAGTTTCGTGGCTGTGTACTTGTACATTTTCATACTAAGTCTGGAGTTCT
CCGTACTTCAGGTATCCTCCACCTATCACCTACCAACTCCTCCTTCATCC
TTCTCAATAGATACTGCCCTCAGAAGTTTATCTAAAGCTGTTTTTACCCA
CGCTATACTTCCAAGTAAGAAAGAAAAATATAAAAGATATTATTATAAGT
TATACCCAAGCAGAGTAATCCACTGTCTAAAAACCGCGCATAGTATAATA
CTATTTTACTATCGAATAGTACTATATCCTAGTAGTTGTATGTATGTGTA
GTAAACCGTTTACAACGACCATACGCCATTCCTATTCGTCTTACGTACAT
ACAACAACAACATATTATACAAATCATAGGAGGAAAGTCTTTTACTATTG
ATTTCCTTTTTGTGCTATGAGGAATTTCATACTCACATTGGACAATTTCT
ACCTCATTTTGGAACATAGATCATTCACCTTAAAAAGAAGGAAAGAGTAC
AACAACAACAACACCAACTAACTATAACATTACTTCTCTTCTTTTCTAAC
TAACTAAATAATCATTAGTAGACATATAAATGAATCTAGGAGATTGATTG
TATTAAGTAATAACCAATAACCATTCAACCTCTACTTTTCAAGATGTTAT
AAGCAAGGCTACTGTATAGTTGTAGGTCTACAAAAAAATTAACGCGGGTA
CATTATTATACATTAAATAGGTCGATATTAACTAAGATAGTAAAGGGAGA
GAGAAAGACACAAAGAAAACTGACAACAATAAAATCATCGCGTTGTGTAT
AGTATTAATGGAGTGTTGTACAACGTGGTGGCTCCAATGCCAAAATTGTA
GACATAGAACTAATCTAATGTGTTTGTCATATTTTATTATAAGTGTACGT
TTGTATCATGTATCCAATAAATTATTCATAGCTAGATATACAGGGTTTTT
ACAGTATGTACTTAAGTAATACCTTTTATCAGAAACAGTAGGAAGGAATG
TGTAGTATTATTATAGCTAAGAAATCTCTTGTAGCATAAATATCAATTAT
CTTTTTTAAAAGTAAGAGAGATGGAAAACTCTACCGTGTCTTGATATTAA
TATTACCTTTATWAAAGAATAATAAAGTTATKCCCGCGTACGAGACACAA
ACACTTGAAGCCGAGTATGTTGTAGGGAATTGTTAAATGTACATTCTAAA
GGATGTACTATCAATTATTAAAATAGAAACGCATTATGCTTCATTCCTCT
GGCATTGGCAGCATAATTCCCTAATTATGTATTAATTAAACGATAATGAT
TTACCCATCTTTTCATTCTCAATTTCAGATGATAGTCAAATTGAGGAGGA
GTTGAGAGAATCAAGCGTACAGGATACGAGTGAATGTATAAAAAAACTTA
TTTGTATTATCCACAGTATCCCTTCTCCGGAGAGAACTTGGGATGAACGT
ATAATCGCAGAAGCAATCTCTCCCAAACTTGTATTTAAATCTCAACACAT
TCAGCTACAACTTGCCGCTAGGCTTGGATATGCACAACCCAGTCAATGCT
ACGACGTTTATAGTCGATGCCCCTTCGAGAAACATCAGCTTATGACCCTT
ATACGACAGAGAGGAATGAGTCTCAACARCCCCACCTCTCCAGACTATGA
TTGTACAGTCATATTCTTATGGAAGAGAAAGGAATCCAAGATCACTTTTC
CTAGTAATGATATTGACAAATAATAAATTGAAATACATAATTAACAAGAT
AAGATTTGAGTCTGTTTGTATATAAATGGTTTTATTCCATAAGGTATAGA
AGTGTGGTGATAACAAAATTTAGAACTGGATCATTTGTCCTTTACGTTTC
TTGTCTCCTCCAAGTTCGAAATGCTTCGTTCTCTTCAAAGGAACTTGTTG
ACGTCTCTTGCACTTGCTGCACTCCAAACGCAGCACAATCTTCTTGGTAG
TTTTTGCCTTTTTACGCAAAATAGGCTTGGACTGACCTCCAAAACCCTGT
TGCTTCCTGTCGTAACGCCGACGACCCTGTGCAAACTTGGATTCCTGGGA
CTTTTTGTATTGAGTCACCTTGAACTTTTCATGGTGATTGCAGCTAGGAC
AATAAGTCCGGCGAAGCTTGGGAATGTTAACCTAGAGACGGAAAGAGTCA
ATCATTAATATAAATCATGTCTATAGTCACATTAATATATGAGTAATAGG
AAGGGGATTTGTGCCAGGATGAGAGGTCGGAGAGGAGCGAGTAACTCCTC
ACCGAATCAATCCCCATAGAGGCAATTTCATTTTCCAGGATCTAATTAAC
GATTAGACGGGGAAGTAGTCTGCATGTTACTCAAAATCCTGGGCAAATCG
AGGAGGATGGAAGGAGGAGAAGAGAGAGGTCTTACCATTTCGTCGTCAAC
AGCTGAAAGGAAAGGGAAAAGGAGAGAGCAGCTGACGTTTTATTCTCTTG
TTCCCAAAATCAATAATAACTTTGAAAATGTAGTCTCGAACCCCCCGCTC
CGGTATGTCAAGGACTTTCGATCCTAAATTTAAAAACAGGATTCTATAGA
TAATATTTTTTAAAGTCTATAAAAAATAATTTCCGAACCCTGAAAATGAG
GATTTAGTAGAAAAAAGGGCAAGAAAGAAGATAAGTATTAGAGAGCCAAT
GAGAGATGAGGTCGGCGCGGGAGAGAGCCAATGGCAGGTGTTTGTTTGCC
GCTTCTTTTTTACTTCAAAGTTTAAAGTTATATGTTAGGATTTTCAGTCC
GGATCATAATTTATTTTACAAACTTTGTTATTGTTCACTCAAAAAGTTAA
GTTTACTAGTCCCTTCTTTTGGCACTAACAATTCAAAGTTCAGTTGATTC
GCTCCTATTGTTGGACATTCCTCGTTAACCCTCGCATTCCGTCTCCATTC
GTATAACAACAACATGTCCGAAACAGAAGCCGTGACCGCCGCTACCGGTG
AGAAAACCGTTGAGGAACTTAAAGGAACTAAAAGAGCAGCAGAAGTAAGT
GACAAACCGGCTCTTGAGTCTCCATATCCTAACCTTTGATCCTTTATTTT
GCAGACCGAAACGGACGAATCCAAAAAGATGAAAAAGRCCGAGRCCAACG
GTTCCRCCAYGGCGSCAGCCACAGAAGATGAGACTGAAAACGGAGTGGTC
GAAGATGAGGAAGATGAAGATGAGGAGGAAGAGTTAGAGGACGAAGAGGG
ACTCGGAGACGAAGAGGGAGAGGAAGACATCGATGAAGAGGGAGAGGACG
AAGAAGGAGAAGGTAAAGGATACAGAGATGAGATACCACTTGAGGCTCAA
CGAGAAGCATTTAAAATTATCCATTACAATCTAT
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