EMLSAT00000006978, EMLSAT00000006978-702825 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006978
Unique NameEMLSAT00000006978-702825
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s397supercontigLSalAtl2s397:1192675..1194060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006978 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006978EMLSAG00000006978-689744Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030651EMLSAE00000030651-739579Lepeophtheirus salmonisexon
EMLSAE00000030652EMLSAE00000030652-739580Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780515auto780515Lepeophtheirus salmonispolypeptide
EMLSAP00000006978EMLSAP00000006978Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006978

>EMLSAP00000006978 ID=EMLSAP00000006978|Name=EMLSAP00000006978|organism=Lepeophtheirus salmonis|type=polypeptide|length=263bp
MNTLDLSANYDSEVDKKRERRSSPIWKASKREVSTRNDIGRPEYTREYES
LYDRHKRLVDHYASSSVWDGFTKKSVTDMDVIQSHHRFIWKESEEGEESL
PWELALAKKYWDRLFKEYAICDLSRYLKNEIAMRWRTQKEVVQGDGLRSW
EVNFAYEEKKESKNALVKVRLCPDCSYKLNYCHKKKEVTKSRKHKRSHKS
RRRSRKEESSPDSESTSEAKKSKGNEKKEEDTGKGDVWKEAPDIEKEKSR
EDNFSEYLEDLFM
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mRNA from alignment at LSalAtl2s397:1192675..1194060-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006978-702825 ID=EMLSAT00000006978-702825|Name=EMLSAT00000006978|organism=Lepeophtheirus salmonis|type=mRNA|length=1386bp|location=Sequence derived from alignment at LSalAtl2s397:1192675..1194060- (Lepeophtheirus salmonis)
ATGAACACTTTGGATCTTTCTGCCAACTACGACTCCGAGGTGGACAAGAA
GAGAGAACGAAGATCTTCTCCAATTTGGAAGGCAAGCAAGAGAGAAGTGA
GTACGAGGAATGACATTGGCAGACCCGAATATACGCGAGAGTACGAGTCC
CTCTACGATCGACACAAGAGACTTGTGGACCACTACGCTTCCTCTTCTGT
CTGGGATGGATTCACTAAGAAGTCAGTCACGGATATGGATGTCATACAAA
GTCATCATCGCTTTATTTGGAAGGAGTCTGAGGAGGGGGAGGAAAGTCTT
CCCTGGGAGTTGGCTCTCGCTAAAAAATATTGGGATAGGCTCTTTAAAGA
ATATGCAATTTGTGATTTAAGTAGATATTTAAAGAACGAAATTGCGATGC
GATGGAGAACGCAGAAGGAAGTTGTCCAAGGTTTGAATCCCTACTGGTTA
TTTCCCTTAGTTACTCATTATTAGAACTGTCACAATGTCATATCATGATT
CAGAGCGTTTTCACTGCTGTCATTAATTGCGTTATAATTGGAAGGGACTT
GGGGGCTCAAAGTTGATATTTGTACTATATAAAATGAACAAATATCCAAT
AAATCTGGATGTAACTTCATCTAATAACATCAAAAATACATAAACACTTA
AAACTTGCATTGAATACTACTTGTTGTAAAATGATAAACACTAATATTTG
TATATAATCGAAAGAATATGTACTAAAAATCCCCAAAAATGGTTGAGATT
TGGTCAAAATTCGTTTTTGATCGTTCAGGGACAAAAAAAAAGAGTAGGAT
AATTAAATAGAAATTTCTTATTCTTTCCATTGTAATAGTTCATTTGTATC
TACAATATGGAAATAAGATAGTATATCGATGTGATGACATATTTTTAATA
CAACTTAGAGTCAGATATATAATAAAACTAAGCAATAGAGGGATATATTT
TTGATGTTATAATCTATATATTATATTTCCAGGGAAGGGACAGTTCTCCT
GCGCTTCACGTAAATGCACTGAAGGAGATGGACTTCGCTCATGGGAAGTC
AATTTTGCCTACGAAGAGAAAAAAGAATCAAAGAACGCACTTGTCAAAGT
GCGTCTATGTCCTGATTGTTCCTATAAATTAAACTACTGTCATAAAAAGA
AGGAAGTCACTAAGTCAAGGAAGCACAAAAGATCTCACAAGTCCCGTCGC
CGGTCTAGGAAAGAAGAGTCGTCTCCCGACTCAGAGTCAACGTCAGAAGC
AAAGAAATCCAAGGGGAACGAGAAAAAAGAAGAAGATACAGGGAAAGGGG
ATGTTTGGAAAGAGGCTCCTGATATTGAGAAAGAAAAGTCGAGAGAGGAT
AACTTTTCTGAATATCTTGAAGACTTGTTTATGTGA
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