EMLSAT00000007016, EMLSAT00000007016-702863 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007016
Unique NameEMLSAT00000007016-702863
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s399supercontigLSalAtl2s399:369072..370235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007016 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007016EMLSAG00000007016-689782Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030803EMLSAE00000030803-739731Lepeophtheirus salmonisexon
EMLSAE00000030804EMLSAE00000030804-739732Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776947auto776947Lepeophtheirus salmonispolypeptide
EMLSAP00000007016EMLSAP00000007016Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007016

>EMLSAP00000007016 ID=EMLSAP00000007016|Name=EMLSAP00000007016|organism=Lepeophtheirus salmonis|type=polypeptide|length=136bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPXTGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
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mRNA from alignment at LSalAtl2s399:369072..370235+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007016-702863 ID=EMLSAT00000007016-702863|Name=EMLSAT00000007016|organism=Lepeophtheirus salmonis|type=mRNA|length=1164bp|location=Sequence derived from alignment at LSalAtl2s399:369072..370235+ (Lepeophtheirus salmonis)
GTTTAAGGAATAAGTGTAGCATTAATCTGTAGCATCATCATGTATTCCTT
TTTCTATAGATTTTAATTTATATTCAGTATTCTCAGCGACATTTCTGATT
CATCATCGTCTTCATCAAACCTAACTTTAAATGGCGCGTACAAAGCAAAC
AGCCCGTAAATCCACGGGAGGAAAGGCTCCTCGTAAACAATTGGCAACCA
AGGCAGCCCGTAAATCTGCYCCTYCCACTGGTGGAGTGAAGAAGCCTCAT
CGTTATCGCCCCGGTACTGTGGCTCTTCGTGAGATTCGTCGCTATCAAAA
ATCAACAGAGCTATTGATCCGTAAACTTCCTTTCCAACGTCTTGTTCGTG
AGATTGCTCAAGACTTTAAGACGGATCTTCGGTTCCAAAGTGCTGCTATT
GGTGCACTTCAAGAAGCCTCTGAAGCCTATTTGGTGGGTCTCTTCGAAGA
TACCAACTTGTGTGCCATTCACGCCAAACGTGTGACCATCATGCCCAAGG
ATATCCAATTGGCCCGTCGTATTCGAGGAGAACGGGCTTAGAGTAGTCTC
ATTTTCTGCATAATATTGTTGTATATAATATATGTTTTCATTTGATTATA
TACCTCCCAACAATATCGATATGTTATTTCTTATTCAAAAAGTAAGATCC
TTCTGCAGCATCGACTTCCTTGTTTCTTATCAAATTTGAATTATACGAAA
TCTCAACTCTCCTTGTCGGATGCATTTGTCAAGTTCATTGAAGGATTATT
TATATATTATTTGACTTTGTGTGCAAATAAAAATTCTTTTTTTGAGTAAG
AAAGCCTTTCACTATAAAAATAAAATGGTGTTCTCTTTCACTATACTTTT
AATATCTATCTATCTTGCTCTCTGGCAAACCAAGATTTATTATTTGAATT
GATATTCCGTTCTAATAGTTCTCATTGAATATGTTCAAGATGGTTTCCTT
AGCGTGACTTGTATCCCAGCTTTTATTTATAATATATCAATCTCAATAAA
TACTGTATTCCTATGTGACTTAACAAATTTATGTGATAATATATTTATTT
GCAAGAAAATAAAATAAAAACCCATAAGCACATATATATCTATATTTTTC
ATTGATAATCGCTATTTTCTCAACATGCTCCATTATGTCTCATTTTCACT
TTATCTATAAATTA
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