EMLSAT00000007056, EMLSAT00000007056-702903 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007056
Unique NameEMLSAT00000007056-702903
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3supercontigLSalAtl2s3:1778107..1780625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007056 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007056EMLSAG00000007056-689822Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031008EMLSAE00000031008-739936Lepeophtheirus salmonisexon
EMLSAE00000031009EMLSAE00000031009-739937Lepeophtheirus salmonisexon
EMLSAE00000031010EMLSAE00000031010-739938Lepeophtheirus salmonisexon
EMLSAE00000031011EMLSAE00000031011-739939Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780880auto780880Lepeophtheirus salmonispolypeptide
EMLSAP00000007056EMLSAP00000007056Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007056

>EMLSAP00000007056 ID=EMLSAP00000007056|Name=EMLSAP00000007056|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
MLRPSRLESELKTFKVLWCKASGRKTKSREEDALLVLEASQRLAILKSLD
GSSEIARGTGMKLAELSNVEPGVTVLSFGGREVQINEEIFSSDNVESENS
SMPPIPIKYKRIRLMPRPPLDLCISREEVVTDVCVDSRLTKVLRSHQKDG
ILFIYKCLMGYRTPGYYGAILADEMGLGKTLQTISLVYTLLKQGPWNGMP
EIKRCLILAPSSLLGNWKEEFNKWLGPERLKVYVGESSSSKITEYLKYPN
EPVVIISYEINDFVRNFETPILRSKQPNSSEEDAEVGNLKIEELSSITEK
FILRRTQDVISSFLPPKTENVLFCGLSPLQKELYKKVIDQIFCEGFNSEC
VFTTIITLRKICNDTSLILGNESDSNSENKDRGSKIEIVSSMLNTLKSTG
EKIVIVSISTKVLDVLEILCSKFNFKSLRLDGSTPGSKRQSIVNRFNNKF
SDDFVLLLSSKAGGTGLNLIGASRIIMYDLDWNPSHDIXAMARVWRDGQT
KPVFVYRLITTGTIEEKIFQRQVTKQGLGDGVVDAKTAINHFTQEELKDL
FSLTSGLENDCETHVLLSCESCHNGRSNTKDQSPEPTRRKCQLGQKQSSI
LEPKKRSSIKNLLKWNHFPIEEIKNNIDDPLVLGVQDFLTFLFQNKIN
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mRNA from alignment at LSalAtl2s3:1778107..1780625-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007056-702903 ID=EMLSAT00000007056-702903|Name=EMLSAT00000007056|organism=Lepeophtheirus salmonis|type=mRNA|length=2519bp|location=Sequence derived from alignment at LSalAtl2s3:1778107..1780625- (Lepeophtheirus salmonis)
ATGCTGAGGCCCTCCAGACTCGAGAGTGAGCTGAAGTAATAACAGCTTAA
TAACTAAGATGTCAAATGAGAAGAGGGAAGCAGCTTGCCGTTTGAGTGTG
AGGGAGGGAGGGAGGGAGAGAGGGAGGGAGCACTTTCATGTMTGCAGTCT
CCACTCCCACCTCACAGCAACTGCAATGTATAAGCGGAGAATCGGACTTC
AAAAMCCCGCGGGAAAAAGACTTTATCCTCTGTCTAAAGAAAACCTTGAC
TCTAATAATACTTCTACTGATGCCGTTACTCCTCCAACGGCAACACCCAA
TGTCAATGAGNTACAAATGGATTGAGGACCTTCAAAGTCCTCTGGTGTAA
AGCCAGTGGAAGAAAAACAAAAAGTAGGGAGGAGGATGCTCTTCTTGTCC
TTGAAGCATCCCAGCGACTTGCCATCCTCAAGTCATTGGATGGATCCTCT
GAAATTGCTCGAGGCACTGGAATGAAGCTTGCAGAACTGAGTAATGTTGA
GCCTGGAGTTACTGTTCTTTCATTTGGTGGACGGGAAGTACAAATTAACG
AAGAGATCTTCTCTTCAGACAACGTAGAATCAGAGAACTCTTCTATGCCT
CCAATACCTATTAAATACAAAAGAATACGTCGTATTGGAAAGGCGTCAAC
GCTACGAACCTTGCAAGATGACAATGTANNNNNTCCTTAGTTATGCCAAG
ACCTCCTCTTGATTTATGTATTTCTCGAGAGGAAGTCGTCACAGATGTTT
GTGTTGACTCCCGKCTAACTAAGGTGCTTCGTTCTCATCAAAAGGATGGT
ATTCTCTTTATTTACAAATGTTTAATGGGATATCGTACTCCAGGATACTA
TGGAGCTATTCTTGCTGATGAGATGGGTCTTGGTAAAACTCTACAAACTA
TTTCCTTGGTATATACTCTCCTCAAACAAGGCCCTTGGAACGGAATGCCT
GAGATCAAGCGATGTCTTATTCTTGCTCCTAGCTCCTTACTTGGAAATTG
GAAAGAGGAATTCAACAAATGGCTAGGACCAGAAAGACTGAAAGTTTATG
TTGGGGAATCATCTTCCAGTAAAATCACGGAATACCTTAAATATCCCAAT
GAACCTGTTGTGATCATATCCTATGAGATGTTTGTACGATGTTTCAATGA
AATTTCGCGTCTTGATTTTCAGCTTTTAATTGCTGACGAGGGTCACCGTT
TAAAGAATAGTTCTATTAAGGCATCAACACTTATCCAGTCCATGAATGGT
ACAAAGAAACGAGTTATTCTTACGGGTACACCGGTCCAAAATGACTTGAA
ATAATTTTACTCCCTCATTTCTTTGGTTAATCCTAATATTCTTGGTTCTA
GTAATGACTTTGTTCGAAATTTTGAAACACCCATTCTTAGAAGTAAGCAA
CCCAATTCTTCTGAAGAAGATGCAGAAGTTGGAAACTTAAAAATAGAAGA
ATTGAGTAGCATCACTGAAAAATTTATTTTAAGACGAACTCAGGATGTAA
TAAGCTCATTTCTTCCGCCGAAGACAGAAAATGTTTTATTTTGTGGTCTA
TCGCCACTACAAAAGGAATTATATAAAAAAGTGATCGACCAAATTTTTTG
TGAGGGATTCAATTCAGAGTGTGTTTTTACAACAATAATTACTCTAAGGA
AAATATGCAATGACACATCGTTAATTTTGGGAAATGAGTCGGATAGCAAC
TCTGAAAATAAAGATCGGGGTAGTAAAATTGAAATAGTATCATCTATGCT
TAATACGTTAAAATCTACTGGAGAAAAAATAGTAATTGTATCCATATCCA
CCAAAGTTCTGGACGTTTTGGAGATACTTTGCTCGAAATTTAATTTCAAA
TCCCTTAGGCTTGATGGCTCAACGCCAGGCTCAAAAAGACAGTCTATAGT
TAATAGGTTCAATAACAAATTTTCTGATGATTTTGTTCTACTTCTAAGTT
CAAAAGCCGGTGGAACTGGACTTAATTTGATTGGAGCTTCACGAATTATC
ATGTATGATCTTGATTGGAATCCATCTCATGACATAMAAGCCATGGCCCG
AGTTTGGCGTGATGGTCAGACCAAGCCGGTTTTTGTATATCGTCTAATTA
CTACGGGGACAATTGAAGAGAAAATTTTCCAGCGTCAAGTTACTAAACAA
GGTCTTGGAGATGGAGTGGTTGATGCAAAAACTGCGATTAATCATTTTAC
ACAGGAGGAACTCAAAGACTTATTTAGTTTGACCTCAGGTTTGGAGAATG
ACTGTGAAACTCATGTATTGTTATCGTGTGAGTCATGTCATAACGGAAGA
TCAAATACAAAGGACCAATCACCTGAGCCCACTAGGCGTAAGTGTCAGTT
AGGCCAAAAGCAATCATCCATTCTAGAGCCTAAAAAAAGATCTAGTATAA
AAAATTTACTCAAATGGAATCACTTTCCAATTGAAGAAATTAAAAATAAC
ATTGATGATCCATTAGTTCTAGGAGTTCAAGATTTTTTAACATTTTTATT
TCAAAATAAAATAAACTAA
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