EMLSAT00000007101, EMLSAT00000007101-702948 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007101
Unique NameEMLSAT00000007101-702948
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s3supercontigLSalAtl2s3:999255..1000184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007101 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007101EMLSAG00000007101-689867Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031205EMLSAE00000031205-740133Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780231auto780231Lepeophtheirus salmonispolypeptide
EMLSAP00000007101EMLSAP00000007101Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007101

>EMLSAP00000007101 ID=EMLSAP00000007101|Name=EMLSAP00000007101|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MXTNLVIPEAEVPVFTAYSALAVDDIDKDDVNDPQMVTEHVNDVYMYLRQ
LERSQDIRQNYLQGSSITPKMRSVLIDWLXXVHQQFSLLQETLYLTVCII
DRYLQEEGGNTQKKILQLIGVSAMFIASKYEEMYSPEIRDFVFITDNTYT
EHQIRTMEIKMLKTLNFELGRPLPLHFLRRNSKAGFVNAKIHSLAKFIME
LSIVEYKMAHIYPSMLAAAALAYSIRVFDEDEDSYLEDLWTPTLVHYSSY
TLEEILPFVKELAKLVQKVVNSPQDAKLMQVRKKYTSRKLMSIAQNPHLK
SSVAVKLAE
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mRNA from alignment at LSalAtl2s3:999255..1000184+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007101-702948 ID=EMLSAT00000007101-702948|Name=EMLSAT00000007101|organism=Lepeophtheirus salmonis|type=mRNA|length=930bp|location=Sequence derived from alignment at LSalAtl2s3:999255..1000184+ (Lepeophtheirus salmonis)
ATGGRAACAAATTTGGTGATTCCTGAGGCAGAAGTACCCGTTTTTACAGC
ATATTCTGCTTTGGCTGTAGATGACATTGACAAAGATGACGTAAACGATC
CTCAAATGGTAACGGAGCATGTGAATGATGTGTACATGTACTTGAGACAG
TTGGAACGATCTCAAGATATCCGGCAAAACTATCTGCAAGGAAGCAGCAT
CACGCCTAAGATGCGAAGTGTACTCATCGATTGGCTCSTGGRCGTGCATC
AGCAGTTCAGTCTCCTCCAGGAAACTCTGTATCTCACCGTGTGCATCATT
GATCGCTACTTGCAGGAAGAGGGTGGAAACACGCAGAAGAAGATCCTTCA
ACTCATCGGAGTGTCTGCTATGTTCATTGCCTCAAAGTACGAGGAAATGT
ACTCCCCTGAAATACGCGACTTTGTCTTCATCACGGATAACACATACACG
GAGCACCAAATCAGAACCATGGAAATCAAAATGCTTAAGACTCTCAATTT
TGAGCTTGGAAGACCCCTTCCCCTTCACTTCCTACGCCGTAATAGTAAAG
CTGGTTTTGTGAACGCAAAAATACATTCTTTGGCTAAGTTCATTATGGAG
CTTAGTATCGTGGAGTATAAGATGGCTCACATATATCCTTCCATGTTGGC
AGCAGCAGCTCTAGCTTACTCGATTCGAGTATTTGATGAAGATGAAGATT
CATATTTAGAAGACCTATGGACTCCAACTTTAGTTCATTACTCAAGCTAC
ACTCTTGAAGAAATCCTTCCTTTTGTTAAGGAACTGGCTAAGCTTGTACA
AAAAGTTGTTAACTCTCCCCAGGATGCAAAATTGATGCAAGTAAGGAAAA
AATACACAAGTAGAAAATTAATGTCAATCGCTCAAAATCCACATCTTAAA
TCTTCGGTTGCTGTCAAGCTCGCCGAATAA
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