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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s402 | supercontig | LSalAtl2s402:410135..415370 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000007142 >EMLSAP00000007142 ID=EMLSAP00000007142|Name=EMLSAP00000007142|organism=Lepeophtheirus salmonis|type=polypeptide|length=297bp
MTLYSAHSSMSIFSRKKTQYQNFLNLSNVFLLITSTILIFSAIILIKFYY
IDKLDFWSSVFWITPTLMIVLGVYTFCVCIYGFLISGSENRIFLGIYAIL
LSIAFLAQLGSIFTSLELRNHLVQGRLEQSSINEDLDKYNIDYSVTKKWD
ALQSGLHCCGGQNFLTGYNDYRNTAIGGNNSVPDSCCHEMEKNCGKGVFS
RTETEVRNSIYVNGCLTVLKDKLDNEVTPMMIVYAVVGVVLAITEIITIV
LACAYVAQLNRRRRRDMDFRYGNAGHDPQIAGISDPLNATSDRETIC back to topmRNA from alignment at LSalAtl2s402:410135..415370+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000007142-702989 ID=EMLSAT00000007142-702989|Name=EMLSAT00000007142|organism=Lepeophtheirus salmonis|type=mRNA|length=5236bp|location=Sequence derived from alignment at LSalAtl2s402:410135..415370+ (Lepeophtheirus salmonis)
AGAACACACATTCATTAAAAGAGTGCCTTTCTAGAATAAAAAAGTAACAA
ATACGAGTCCTGTCTGCGTTTTTGTGATACCCACTCCTTCTCTCAGTCAT
ACCTGTTGTTGTTGTTGTCGTCGTCATCTTCCTTAAAGCATATACATACT
CTACTACATAGTGTGTGCCTGCGAAAAAGGTATAAGGTATAATAATAAAT
AATATAACCTACTCCCGATTTTTTCAGTTTGTAGTATTTTAGTAGTGTGG
TCCCCTGTTACCCGAATTACATTGATAAATTATTTTCTCTCACTTTGAAT
CGTATACATACATATTAATATAAAGTGTTGAAGAAGATTAAAAGAAAAAT
ACATCTTATACAGGATATTTGCAATTAGTGCAAGGTAAGTAAATGCATAT
GATATATATGTACATAAATGTATCCTTCATCAATTCACATCTGTGGTTAT
ATTATAAGCAAAAAGAACTCATGATTCAAGTGCTCTCGTTAGGGTCGCTC
ATGTTGTTTTTACCTGTAGCTAGATGGATTATGTCGCTAAGTAGAATTGT
AGTACATACTCCTTGGGGAGAATTGCAATGCATACTATGAATTATAATAC
CTATAGCTTATATATATGATGCGTCAACATAAAATAATCTCAAAGAAAAG
GAAATTTTTTCAATACGTATTTCATAGACTTATTTCGCTCAATAATGGAT
TTTGTATTTAAATTTCTGAGGCAAGTTGAAATACCCAAGAATGTTAACTA
TAGTTTAAAATCTTCATTTGATTTATGATATTTAATTTGACGCCAATATG
GTCTTTCAAATAAAATCTATCAATTTGTAATTATTTATTTGTACAATGAA
TGTGTTTGCTGCTTTAAGTAGTGCCATTTACCACGCCTCCAATAGAATAA
TTTGTTTTGATAGAAATGACCTATAATTTATTAGTAGAAGAATAAAAATA
TAATCCATACTTCATTTTGGAAAAAAAAATCATTCAGGCTTGCTTTTGTG
TTGACAGGCCTCATACGAGTATTATAAGAATGGAGGAAGAAAAAGGTGAA
TCAATAATGATTAATAAAAAGGATCACGTAACAGACATTTAACCTATCCA
CTGCTGTAGTTCACTACTCCTTGTTGCAAGCATGGGAGAATAAATAGTCA
AGAGGAATCTGATTCCGTTTTGAATGTATGTATATTGCAAACGGTTGAGT
CATCATCGTCCTTACAATAATGACATACAATGACACCCTCTCCTGGTACT
CTATAATCTACGAAAAATACCAAACTAATTGTATTAAGAAAGAAATCACA
TTCTTGATATGGTTATTTGCTAAAAATCCGGTTTTACATTTCTTTACGTA
ATATCCAATGATAAGCCATGATAAATTAATATGTGGGTAATCAATACTCA
CAAACTAATTAAGGGGCTTCATATTTTTTTTGTTTATAGACCGAGTTTGA
GTGACTTGAATTGGATCGATTGAAATATCGATTAAACGACTTTATCATGA
CTCATCACTACTACTCTTGTTCGATATAAAGGAACTAGTGGAGTATCGAG
GCACTGATACATTTGAAACGGCACTGTACTCAACTGATATTAAAAACCAA
TACTTGTACATACCTCCATTACCCTTTAAAAAAATGGCCAAATAATGATC
CAAGTCCTTAGAGCACTCACGCTATTCCAAACAAAAATTCCCTTTATCAA
AATGCACGAATAAAAAACATATAAAATATTTTTAGAGATCGAAATAAATC
CTTTTATAGACATCAGATCTTCTTTTATTTCTGTATTGCATGAAATGAAT
CGGAGTTTGATAATACCTTGATTTATAAAAAGAATACGGCATATTCCTAG
AAAAAATAAATAATAGAGCATACCGTGACTTAGTTAAGTATGTTCCCACA
TACTCGTGCATACATATATCCTTAATAATCATCATTTGTAACAAAGTACC
ATTGTTTCCCTTAACTAACCATTGGTTCCTTACCTCAACAAAGAATCAAT
AAGCAGTAACACATGTAGTAGTGCCCTTCAAGGCTTATAATTACTTCTTA
TATCTTTCAAAAATGTGGATCATCAACATAAAAATAACCTTGGAGAAATT
CTCAATTTATCCTTTTACTTCATAAATGTAACCAGCCTAATATTTCCTGA
TGATATTTAGGTCAATAATGGTTATATATTCAAAGTTCTGGAATGGGTTG
AATTTCTAAATAATGTTTATTATCTCTAATTATATATGATAGGGTATTTT
TGGGACTTTGAGTGTAATTTGCAGTATTTTTGAAGGACTAATGAGCATAT
TTTATAAACAAACATGGAATAAAGCTAGTTGAGGAATACTAATGTACTCA
TTTCGATTCGATTTGAGGGGAAATTATTTTAACTTGTTTGAGTGTTGATG
GACCACCACAAATACTCTAACTTTTGTCTTTAAAGCCATAAGGATTCCAC
CTGAATCCTAATGGCTTTATTAATGCACTCGCCGAGCAATGCAGAATCAA
CACTCGGAAGTTGCAGACTTTATAGTTTTATTCTAAATGTGGTTATAGCG
CTTAAATTACTTTCAGGGGTTTATCAGTGTGTGTAAAATATAACTGGTCT
GTGCATTCTATTGACTTTTTGATAGACGAATCAACTTTTTTCAAAAGCTA
ACCTAAAGGATGTCTTTCTCTAAGCAATTTTACAAGTTTTATAATTAATT
AATTAGTATTAATAACATGGGAATCTCAAATGTTTATTTGATGTATTTCT
CATAGATGAGTTGATTTTAAATCATATCAATAAAAGCAAATCACTTTTAC
CCCCCAGTGTATGAATATTTCCAAGAATACAAATGAATTACCTCATGTTC
ATTATTTTATGTTTTAAAAATATATTATTTTGATGAAATTCATCGACTAT
GAATGAAGACTACTGCTTATTCAAGTCTTATTTAAATGAGTGAAGGTAGA
AGCACATGACTTCCCCCCCAAAAATATTACCCAAAAATATGAAAGTTCTT
TATACATTGAATATACGTTCCTAAAGATCATTTTTCTAGAATTTGCCTCC
TCTTGGAATTAAATTATGTTGAAGGAACACCTTAATCTATTCACAGGAAA
CAGTTTATGACTAATCTCACACCAGGCATGCCATTTATTATTATTTAATT
ATAGCACAACAACGAATAATGACAAAAGTTGTAATTTATAATTATTCTTT
CAGAACTAAAGGATAGTGACTTGAATCAAGAACGTTCAAATTTTATTTAT
TTCAACGTTGACCTTGTAACAAACACAACCAAGATGACTCTATACTCCGC
CCATTCTTCCATGTCCATCTTTTCTCGGAAGAAAACTCAGTATCAAAACT
TTTTGAATTTGTCGAATGTATTTCTACTCATTACATCCACAATCCTGATC
TTCTCTGCGATTATTCTCATAAAGGTAAATATCGACTTTAACCTGTTTTT
CTTCAATCATCCTAAAACATTAGTTTGAGATTATTGAATATCTTTTGAAG
GGATTTTTATCTCAACAACTTCCTCCATGTGTCCTTGCTCTAACTTGTAC
TCATTATCTCTATTGCATAAACGGACTGTAAACTTTTGTTTTACAATTTG
GTTACAACAACTAAAATATATCTTTCTATTTCAGTTTTACTACATTGACA
AGCTAGACTTTTGGTCCTCAGTATTTTGGATTACACCAACTCTTATGATT
GTTTTGGGAGTGTACACGTTTTGCGTCTGTATCTATGGTTTCCTAATCTC
TGGCTCTGAAAACAGAATTTTCCTGGGCATTTATGCCATTCTCCTTTCCA
TTGCCTTCCTTGCTCAACTCGGCTCCATTTTCACCTCCCTTGAGCTTCGT
AATCATTTAGTACAAGGCCGATTGGAACAATCCTCAATCAATGAAGATCT
CGATAAGTACAATATTGACTATTCTGTGACAAAAAAATGGGATGCTTTAC
AATCAGGCCTCCATTGCTGTGGGGGACAAAATTTCCTCACTGGCTATAAT
GATTATAGAAATACTGCCATTGGTGGAAACAACTCTGTTCCTGACTCTTG
TTGCCATGAAATGGAGAAAAATTGTGGAAAGGGAGTATTTTCCAGAACAG
AGACCGAAGTTCGTAACAGTATCTATGTGAATGGTTGTTTGACAGTCCTC
AAGGATAAATTGGACAATGAGGTTACTCCAATGATGATTGTATATGCCGT
TGTCGGTGTTGTTCTCGCAATAACAGAGATCATAACAATTGTACTTGCCT
GCGCGTATGTGGCTCAACTCAACAGACGGAGAAGGAGAGATATGGATTTC
CGCTATGGAAATGCGGGACATGATCCTCAAATTGCAGGGATCTCTGATCC
TCTTAATGCAACATCTGATCGCGAAACAATTTGTTAATAAGTTCCTGAGT
CTTTGTAAATATTAACAGTAAAAAAAAAAGTGAAAAGATTATAACTTTTA
TGAATCAAACGCAAAATCCTTATTCTCAACTTTCAACCCTATCTTGATAA
ATACTATAATCATTTCTTCTCTTCTCATGTCAAATATTATATGGATATGC
TTAGTCCTTGTTATGTAATAAATCATGCTGTACATAATCTAAACGCAACA
GTACCTCTTTATAAAATTTGTATAATTTAATATTTAACTCATTAACATAT
TATTATATATCTACATACATTTATACCTAGATATTTATACGATGAATTGT
ACCAGCTAAATTATTATCTAATAAGAAATGAAGAATGCTCAACTTTGAAC
TTTCTATTTGTATACAAAACAATTTTTGTAAAAGGCTTTGTTTGGAATAA
AAACACTACAAAATCTTGTTTCGAGCTCAAATCCAGAGACTTGTATCATT
ATTATTTCTTTCTTTTTTAGGGGTGGAAGGGGCTGTATAGCTTCATTTGA
AATTTAATCAATGAGATCAAAATAATGTACCCTATTTTTAAATCACGTAG
AGGTGAAACAAAAAAAATTTACAATTTTTTTTTCTCTTTTATTGAAGTAA
AAGCAATCAGGGACACGCAATTTCAATCTAAGGGCAAAACAAAATTAAAA
TTTTGGTAACTTGTGAGTGTTTTTTTTTTGTATCGTCTTATTATCAAATA
TACCCTGCATAGTATAAAAATAAATTATGTGTGTTTGTGATGTATGCCCT
GCTTAGAAAAACAATGATAAAAACGCATTTATTTCAAAAATGGAGACAGA
TACAGACTTTATGTATGAAATAAAAGTTGTTTAGAA back to top
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