EMLSAT00000007168, EMLSAT00000007168-703015 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007168
Unique Name	EMLSAT00000007168-703015
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s403	supercontig	LSalAtl2s403:307987..312627 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007168 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007168	EMLSAG00000007168-689934	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000031483	EMLSAE00000031483-740411	Lepeophtheirus salmonis	exon
EMLSAE00000031484	EMLSAE00000031484-740412	Lepeophtheirus salmonis	exon
EMLSAE00000031485	EMLSAE00000031485-740413	Lepeophtheirus salmonis	exon
EMLSAE00000031486	EMLSAE00000031486-740414	Lepeophtheirus salmonis	exon
EMLSAE00000031487	EMLSAE00000031487-740415	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776156	auto776156	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007168	EMLSAP00000007168	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s403:307987..312627+

protein sequence of EMLSAP00000007168

>EMLSAP00000007168 ID=EMLSAP00000007168|Name=EMLSAP00000007168|organism=Lepeophtheirus salmonis|type=polypeptide|length=287bp
MLSPLSYPEISPENFYRQALYLRLAAAASRTLPPLTESPLDLSSVNVNLH
KRIPPPLALDPGSPYELSPSSPFHYYLQSIGTPPSTPQTGIWSPLADPFI
SPAPRTPVTPHPVFQFPVLDSDSSSETSDRKAFLSKLHSTIIKCPKEGHE
GQNQSSMIPATLLAGYQGSGPIQLWQFLLELLTDKNCQQFISWTGDGWEF
KLTDPDEVARRWGVRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYR
FVCDLQSLLGYAPDELHSMVELQQQSSPHIKEESSTD

mRNA from alignment at LSalAtl2s403:307987..312627+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007168-703015 ID=EMLSAT00000007168-703015|Name=EMLSAT00000007168|organism=Lepeophtheirus salmonis|type=mRNA|length=4641bp|location=Sequence derived from alignment at LSalAtl2s403:307987..312627+ (Lepeophtheirus salmonis)
AGATTTTCCATCTTGTGTTTTTATATTTCAAAATGTTAAGCCCATTATCT
TATCCCGAAATTTCTCCTGAAAATTTCTATCGACAAGCTTTATATTTACG
CCTAGCTGCTGCAGCCTCAAGAACTCTTCCACCATTGACGGAATCTCCTT
TAGATCTTTCTTCTGTAAATGTAAATTTGCATAAAAGGATTCCTCCACCA
CTAGCACTTGATCCGGGCTCTCCCTACGAACTCTCCCCTTCATCTCCATT
TCACTACTATCTTCAGTCTATTGGAACCCCTCCAAGCACACCTCAAACTG
GAATTTGGTCCCCGTTGGCAGATCCATTCATTTCTCCAGCCCCTCGTACT
CCTGTCACACCTCATCCTGTTTTTCAATTTCCTGTCCTTGACTCTGATTC
CTCATCAGAGACATCTGATAGAAAAGCATTTCTTTCCAAATTACACTCAA
CAATCATTAAATGTCCGAAAGAAGTAAGTGAGGATAAATCCCATAGAAAT
TATAATAATTCAGTTGGAACATGATTTATATGATCATTGAGTGAACCTAC
ATCCATGTTTTTATTTTTTACATCTTTTCAGGGGCATGAAGGACAAAATC
AATCATCCATGATACCAGCGACACTCTTAGCTGGATATCAAGGAAGTGGG
CCAATCCAGTTATGGCAATTTTTACTTGAGTTGTTAACAGATAAGAATTG
CCAACAATTTATTTCTTGGACCGGTGATGGATGGGAGTTCAAACTGACGG
ATCCTGATGAGGTTTGCTCATTATTGTATATTTATGACGACTATTTCTCA
TAATTGTCATTTCTTAGGTTGCAAGACGATGGGGTGTCCGTAAGAACAAG
CCAAAAATGAACTACGAAAAATTATCCCGAGGACTGAGATACTATTACGA
TAAAAATATTATTCACAAAACCGCTGGTAAAAGGTGAGCGAGTCCCTTTA
GTCGCATGATAAGCAATAATACTTTATTTTCAAATTATTTGTAGATACGT
TTATCGATTTGTCTGTGATCTTCAGTCTCTTCTTGGTTATGCCCCTGATG
AACTACACTCAATGGTTGAGCTACAGCAACAGTCGTCTCCGCATATTAAA
GAAGAAAGCAGCACGGATTAGAGCCATCACACATATCATACAATCTTTTA
CATCCAAATCAAGCTTTAAAATACATATTTATACATACTTATATATTAAA
TCTATATCGCGACCACAATGTTTTAGTATTTTGACGTTTATTCTCTGTTT
TCGACAATATAATAATTATATATATTTATTTAATTTCTACATCTTTACAA
AAAAATTAATAAAGGGAAGATAAAGGGTGGTAGTAGTAATAAATAAAAAA
TATGAAAAAGAAAATGTATTCTCGAATAATTCGTTTTTCGAGGTACGAAA
TTTATTTTTATATGTTTGCTTTTACTCAAAGTAATAGATAGATAATCAAT
ATCTAAGAGATTGGAGGGTAAGGGACAAAGTTAGTGAAGTTGACATTTTT
TGTACTTGGTATAGATGTGTATTATAAGTAATGTTTAGTTTTTTCTTTAA
ATTGGAAGTGGGAAGAGATAGATGGATTGATAGAGAAAGAGAGAAAACAA
AAGAATGAGTATTGTTCCTTGATTGGTTTTTTATATTTTATTAATTTACA
GAGATAAGGAAATAAGTTCATTCTTATATTAATTATCGAGGACATAAGTT
TACAAGATATCTTTAAAAAAATAACAACACTGCCTTAACAAGTAATTGTC
ACAAAAAATAACAATTCTTCTGCATGAAACCGTCTTCATACATATGTGTA
GTAATATGTATCATTAAAGTTCATTTATTCACTGTAGACAATGTGACAAT
ACTCTTCTTCTTGTTATCCATGAGATGAGGGGGAAACAATCGAATAATTC
GTCCATTTCTCTTACGCAAATTATATGCGTATTAATAAGAAGCAAACCAT
AAATTACTGCTTTGCAATGTTCTTTTTTTTTGTGCTAAATGATTTGCTTT
GAACAAAAGTATAATAAAAAAAAACAAAAAAAAACGAAGGTCCATATCCA
ATAATATTAGAGATTAAATACTGAGGTTCACGTATTACATTTCTTTTTCC
ATTTATGCATTTTGAAACTTCCTTTCGACTCAGCTAGTATTGCAAATGCT
TATTTTTCACACTAAAATAAAAATAATGATGATAAAAAAAATCGCTTATA
AAAAGTCCCTAATCGCTAGATGAATCAGAATTTAAGGATGTCCTTTGTCT
TTTAACAGCAGGCCCAGAATCTACTTCATTGTTTTCATCAGTTTCTTCTT
CGTCACTATCATAATCAACGAGACCCTAGAAATATTAATAAGTTGAACTA
AAGTTGAACAATAAATCTTGATGGAGAATAGACTCACTTTTTTCATTGTA
CTCGAGGAAGAATTAGGAGAAGACGAAATACTTTCAGTAGTTCCACAACT
ACTATCAGCTTGTGTAGTGGATGTTAATGTTGCAGCTGAATCATCATCCA
CTTCACTTACTTGTTTTAAACTTTCGTTCTCATGCGTTAGACTTTCTTGT
TCTAAAATAAACAGAATGAAAAATTAGTGATTGCATCAACTATTATATTT
ATTGTCTTGGTTCGAGGCTAACATACCACTTGCGTCTGGTTCAATCGTCA
ATCTTCCGTTGGTCGATTCAGGAGGATGGATCATTAAATCTGGTGGCTGT
GCAGAAGAAGTAGAAACAATGGATTGAGTAATCGGAACGGCATCATGATT
CAGTGAAGTATTATTGTTGCTCGCTGCATTCGCTGCCAAAGCAGCAGCTT
CATTTGAGATTGCGCTATTGTTTCTTAGCTGTGTAGGAGATGAGGAAGCC
TCCTCCTCAATTTCTACATCACTGTTAAACCACATTTCTTCGTCCTCATC
TACCTGCCGAGGATCACGACGATAGCGCCCAGGTCTTAAAATTGATCCAA
CACTAAAAATAACAATACAAAATGAACACGTTGTAGTTAGTGTAAAAAAA
ATAATTATAAATAAGAAATATATCCTTGAGTAAAGCATCAAAATTAATAC
CTCTCAAGTTGTGATTGTTGCCGATCTCTGATTCTATCTTGGTGCTGATC
ATACCTTAACTTAAGGGCCTTAAATGTCTGAACATAAGTTATTTTGTCCA
AAGTTTGACTGTAATTTTCCACTACATGTGTACAAAGCGATTTTATATCC
TCCTATAATTACACCAATTAAAAACGTATGATTACTTCCTTCAAAATATA
TGTATTTGAAATCTTAATTACTCACCAATTTGATGAATTCGAACATCTCC
AATATTGCAGAATCCAATAAATTATATCTGCCATTATTATTGATGAATGC
TGATACTACAGGCTGAAATAAATTCCCCTTAATTATGTAACGATTGTAAA
ACTCGTCCTTCAAGGCAACAATTTTCCTCATAAAACGAAGAGCACCTGAA
ATTAAAGAAAATTATATCAAGTCACAAGATATTAAGGAAATAATATGTAC
ATTCAAAAGTAGATTTATAAAATATGAATACTTTTACTTACAAAGAACAA
GGAATGTATGTTTAGAGCTCATAAGTATTAAGATTCGACCTAGGAGATCT
TTGTGGAGGATGTAATTCTTAATGTGGTAAGTATGATGCTCAACACAGAA
ACTCAGTAATTCAAGAATAAGACTTAAGAGCTGCACAGTCGATGAATCCA
TCATCGTTGTAGGTTTATCCCCACTTGTACTTTCATTTAAAGGTTCTATA
AATATAAAATTGAAGAATAGTAAGATGATAATCATGGATTTCCTTTCAAA
TTTAGAGTTACTCTTACCAATTAATACCCTCATGCAATTCCTGTAAAAAT
AATGTAGAAAGTCTGTTTTCTCAGATTTATTGACGCTTGCCAGNCATGTT
TTCAGGATCTAATAATGTCTTTATTATTCCCATTAATTGTACTGCACCAC
TCATCTCAGGATCACTATCACAATTCATTTGCCGTATTATGATGTTCATG
AGAAGAGATTCCTGAAAAAAAAAAAAAAAAGTCAATCAAACTCAATGTAA
AGTCAATAGAAACCAACTAGGTTCAACAGCAAATCAAGTCTTACCTCATC
AGTTGAATTGTGCTGGAGTTGCATATGCTCTCGGACCATAGACGCCGAAA
ATTCTACAATATGAAGAAGAACATCTATTGACGCAGATTTGGTTACCTTG
TCGTTGGAGGCAAGAGTTATTTCCATGGCAGATAAAATTCCCAGACTATT
CAAAGTTTTGAAAAATGATTCTCTTGCTTGTGGTTGCAAAGTTTGAGAGA
AAGTACAGAATTCTTTCAAAAATAATACTAACTCCTTTCTACGATATTCG
TTGGTATTTTCATCCATTAGCTAATATACAAGCAAAGTCAATCAACACAT
GATAACAGAATTAAAATATCATTTGATCTTACTTGATTAAAAAATTCGTT
CAAAAATTGTTCATCTTCCTGCACTAACGACACAATTTCGACTTTATTAA
AGAAAATAAAAGATGACAAGGTAGATAGCATATTTTCTTCAAAAACTGAA
GGGGGAGGTAATACAACATCTTGAATATATTGAACGCGATATGTTTGATG
AATTTTAGAAAGAAGCTCCACATTATTTATGTTGATCACCT

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