EMLSAT00000007179, EMLSAT00000007179-703026 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007179
Unique NameEMLSAT00000007179-703026
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:283506..284288 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007179 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007179EMLSAG00000007179-689945Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031530EMLSAE00000031530-740458Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775820auto775820Lepeophtheirus salmonispolypeptide
EMLSAP00000007179EMLSAP00000007179Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007179

>EMLSAP00000007179 ID=EMLSAP00000007179|Name=EMLSAP00000007179|organism=Lepeophtheirus salmonis|type=polypeptide|length=260bp
MDSIICLDIPVRCVSEDMTSSSSGDSDSSSPLNSSEEDECAPTTSHRTFL
CPSCPKSFKTKSNLNQHLRTHMPQKFICESCGRILFSESGLXYHRLSSHS
GEGGTSFPCSLCSSSFLQNKLLQKHLNSVHSYIKNYPCPYCEASFKRKDN
ADRHVRDTHSLVGKLWECEFCSSKFMSSARLSQHRRLHNSEGTSWICSLC
GKSFLRQKNLRLHSLKKHSESSLKCLSCDFDFLFPSELASHLKYYPEHNL
NPEDDFLFSV
back to top

mRNA from alignment at LSalAtl2s404:283506..284288-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007179-703026 ID=EMLSAT00000007179-703026|Name=EMLSAT00000007179|organism=Lepeophtheirus salmonis|type=mRNA|length=783bp|location=Sequence derived from alignment at LSalAtl2s404:283506..284288- (Lepeophtheirus salmonis)
ATGGACTCTATTATTTGTTTAGACATCCCCGTTCGGTGCGTTAGTGAAGA
CATGACCTCCTCTTCCTCCGGAGACTCGGATTCTTCATCACCCCTCAATA
GCTCCGAAGAGGATGAATGTGCTCCAACGACTTCACATAGGACATTCCTT
TGTCCCTCCTGCCCTAAATCCTTCAAAACAAAATCCAATCTCAATCAGCA
TCTCCGAACACATATGCCTCAAAAGTTTATATGCGAATCCTGCGGACGGA
TCCTGTTCTCCGAATCTGGKCTCCMTTATCACCGACTCTCTTCCCATTCC
GGAGAAGGGGGTACCTCTTTCCCCTGCTCCCTCTGCTCCAGCAGTTTCCT
TCAGAACAAACTCCTTCAAAAACACCTCAACTCTGTACACTCCTACATCA
AAAACTACCCCTGCCCGTACTGTGAGGCTTCCTTCAAGAGAAAAGACAAT
GCGGACCGACATGTTCGGGACACACATTCCCTTGTTGGGAAGCTTTGGGA
GTGTGAGTTCTGTTCCTCCAAGTTTATGAGCTCTGCACGCCTCTCTCAGC
ATCGACGTCTACACAACAGTGAGGGGACCTCATGGATTTGCTCCCTCTGC
GGCAAATCCTTTCTTCGACAAAAGAATCTGAGACTCCATTCTCTCAAAAA
ACACTCGGAGAGCTCTTTGAAGTGTCTCAGTTGTGACTTTGATTTCCTTT
TTCCCTCAGAGCTCGCCTCTCATCTCAAATATTATCCAGAGCATAATTTG
AATCCAGAAGACGACTTTCTGTTCTCAGTGTAG
back to top
Add to Basket