EMLSAT00000007185, EMLSAT00000007185-703032 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007185
Unique NameEMLSAT00000007185-703032
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:318078..322550 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007185 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007185EMLSAG00000007185-689951Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031556EMLSAE00000031556-740484Lepeophtheirus salmonisexon
EMLSAE00000031557EMLSAE00000031557-740485Lepeophtheirus salmonisexon
EMLSAE00000031558EMLSAE00000031558-740486Lepeophtheirus salmonisexon
EMLSAE00000031559EMLSAE00000031559-740487Lepeophtheirus salmonisexon
EMLSAE00000031560EMLSAE00000031560-740488Lepeophtheirus salmonisexon
EMLSAE00000031561EMLSAE00000031561-740489Lepeophtheirus salmonisexon
EMLSAE00000031562EMLSAE00000031562-740490Lepeophtheirus salmonisexon
EMLSAE00000031563EMLSAE00000031563-740491Lepeophtheirus salmonisexon
EMLSAE00000031564EMLSAE00000031564-740492Lepeophtheirus salmonisexon
EMLSAE00000031565EMLSAE00000031565-740493Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776304auto776304Lepeophtheirus salmonispolypeptide
EMLSAP00000007185EMLSAP00000007185Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007185

>EMLSAP00000007185 ID=EMLSAP00000007185|Name=EMLSAP00000007185|organism=Lepeophtheirus salmonis|type=polypeptide|length=634bp
MERTEDDYSRLHEMIQKWLXWTLPGTSDHDSISNMVKENCMHELDAIMSK
RLVFGTAGIRANMGPGFSQLNDLVVVQTAQGMANYLIDYHQANLEKAKSS
GIVIGFDGRHNSNKWAKIIAIIFVSLGFKVHLYSKMTPTPWVPFAVKKHG
HMCGIMVTASHNPKNDNGIKVYWSNGVQILSPHDVNIQKSILKHAEPRPC
MKDILDKLNNPKFDLMQGLFDPFDQITQEYFYILEHNKLLDKEGLNKCFK
GKIVYTPMHGVGSFFIDKSMEIAGFQPVIHVPLQKDPDPNFPTVKFPNPE
EGKSALNLAIIEAEKMDAIYIIANDPDADRLAVAQKMETGKWKVFTGNEL
GSLFGWFLHVVHAHKYPNYKKDSLYYIASTVSSKMLKTMAXMEGXHFEET
LTGFKWMCNKAKEVEDDSSKTVLMAFEESIGYMCGTSVLDKDGITAAVRM
TELIAYLHLRESGKTLLDKLKDIYDKYGYHFNINSYFFNHDSELTARIFE
RIRTLHNGGVSYITNYKRKKKYFPLQYPISISNGKYSIKHIRDLTTGYDS
SMPNQQSTLPTSSLSQMLTFTFENGFVITLRTSGTEPKLKYYAELCGAPD
EKDHKKIEALCKEMINATLEEFLEPKKNKLKPQE
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mRNA from alignment at LSalAtl2s404:318078..322550-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007185-703032 ID=EMLSAT00000007185-703032|Name=EMLSAT00000007185|organism=Lepeophtheirus salmonis|type=mRNA|length=4473bp|location=Sequence derived from alignment at LSalAtl2s404:318078..322550- (Lepeophtheirus salmonis)
ATGGAGAGAACAGAAGATGATTACTCCAGACTGCATGAAATGATTCAGAA
ATGGCTTKAATGGACACTTCCAGGAACGTCGGATCATGATTCCATATCAA
ATATGGTAAAAGAAAATTGTATGCATGAATTAGATGCGATAATGTCTAAG
CGACTCGTTTTTGGAACTGCTGGGATTCGTGCAAACATGGGACCTGGGTA
AGACGTTGGGGATACGAGCTTGTCCATAGTATTAGGAAAAATTAAATACT
TTTAGATTACTCAGTGCAAAGATCCACTCTGAGGTAGTTCACCATTAGCC
GTTAATTTCCAGTCTTTTAATAATTGTGCACCACAAATCGAATCCTCTGA
TGAACCAGACACAACCATAAAACCAACACCATCAATAGCAAAATAAGATT
AAACACTAGGCTTCTGCTCCAAATAACTGAATAATGATCAGAAAATATTT
GGAAAAATATATAAATATCGTATTAAAATAAGCGTCCGCAGGATTATATA
TATATTTTTAATTCTTTAGAAACAAAGTCTTAATTTTTTTTTTTTTAAAG
TTTCAAAAATCCATAGATATTCAAAAAAAAATAATTAAAATAAAATTTTG
TGGAAAAATATTTSAAAAATTAAAATGTTTGGAAAGACATTTAAAAAATG
CACAGCGATTAATTTTTTTTTTTAAATCATTAGTAATCGGGCTTGTTAGA
ATTTTCAATTTGATGTACCATACCAAATACCATAGCCAAAAGATAAATAG
ATTTTGCGTCAATATAACGGTATATTAAAACCATATAATACTAGAAATGA
TGATTTATAGTAATAGTAAATACCCTTTTACGTCACTATTAAAAAACGTG
GTGGAAGTCAAACATTATTAACCTTGTCCCGAATGACCTTTTTTCCAAGA
AAATAAATCCTTCAAAAAAAAAAATTAATCCCTATGTTCGCGTAATTTTT
TTCATCCTAACCAATAAAATCTCTAGAAAAAAGCAAACGTTCCTTAATTT
TGGAGGGGGGCTACTGCTMCTCCAGCCCACCCCCCGCGGACGCGGATATT
CTTGTTTGAGACAATAATCTATCAAAATGTCTTTATTCAATGTGACATAC
GCTAGAAAACTTATAAACAGGGGAAGTTTTGGAGTTTACTAGTCAGCAAA
AAAGAAAAAATCAAATCAAAAACACACTCCAGTTATAATTTGAATTTAAA
TCGTAACTAATCTATGGGCGAGAATTAAATTAAATCATATTACTTTCTTT
TAAGCACACAGTACGAAAATGGGATTGAGATAGCAGCGCTCTTTCGCCCG
GAATTGCCCTAGAAGGCCATCTGGGAGGGTAGTGGGGCCTCGAGGAAGAC
GATTTGCAATGTATCCATGCATTGTCTTCTCGTACTGTGTGCTCATCGTG
GCGACAAAGACAATGTTTTTCTTTGCAATTGACACCTAATTATGTGTTCT
ATAGCATTGTTCATTGGAAAGTTGTACAAAAATGACGAATTTAACCTCTC
AAAATTTGCATGATTTGTCCCAATATACCAAACTGGTAGCCTATATATAT
ATAATAATATTTATAGTTCCCTCAGAATTGGGCGAGGTAATTAGGACCAC
CTCCACTCCGTATCCAACGCTTATGAATTTATGAAATGCATTAACCTTTG
AACAATACATATTTATGTTTATAAAAATTCTTATTTTAGATTTTCTCAAC
TAAACGACCTAGTTGTTGTACAAACAGCTCAAGGAATGGCAAATTATTTG
ATCGATTACCATCAAGCTAATCTTGAAAAAGTATAATGAACTAAAACCAA
TTTCCATTAATAAATAATATGCACAAATATATTATTACTAGGCAAAGTCA
TCCGGGATCGTAATTGGATTTGATGGACGCCATAACTCCAACAAATGGGC
AAAAATAATTGCAATAATATTTGTATCTCTTGGATTCAAAGTCCATTTAT
ACTCGAAAATGACTCCAACTCCTTGGGTTCCATTTGCAGTTAAAAAACAT
GGCCACATGTGTGGAATTATGGTTACTGCATCTCACAATCCTAAAAATGA
TAATGGAATTAAAGTATACTGGTCCAATGGAGTTCAAGTAATTATTACAT
ACTTTTATCTTTTCCACACTCATTACGAAAATCCATAGATCTTATCCCCC
CACGACGTAAACATTCAAAAGAGCATTTTGAAGCATGCTGAGCCACGTCC
GTGCATGAAGGATATATTAGACAAACTGAATAACCCAAAATTTGATTTAA
TGCAAGGGCTATTTGATCCATTCGATCAGATAACTCAGGAGTATTTCTAT
ATTTTAGAACATAACAAGCTCTTGGATAAAGAAGGCTTGAACAAATGTTT
CAAGGGTAAGATCGTATATACTCCCATGCATGGAGTCGGGTCTTTCTTTA
TCGATAAGTCCATGGAAATTGCTGGATTTCAGCCTGTCATTCATGTCCCC
TTGCAAAAAGGTGAGAGCGGATCAATATTGCTAACATTTTGTTAATTATA
TTAACTATTGTTTGGTATTTATCGAAGATCCGGATCCTAATTTTCCAACA
GTAAAGTTCCCTAACCCTGAAGAAGGAAAAAGTGCTTTGAATTTGGCCAT
AATAGAAGCTGAAAAGATGGATGCAATTTACATTATAGCTAATGATCCAG
ATGCCGATAGATTAGCCGTTGCTCAAAAAATGGAAACGTACATTTAAACA
ACACATAATTTTTTTCAGTTCGTAAGTCTTTATATTTTTAGTGGTAAATG
GAAGGTTTTCACTGGGAATGAGCTTGGTTCCCTCTTTGGTTGGTTTCTTC
ATGTCGTTCACGCCCATAAATATCCAAACTATAAAAAAGACTCTCTCTAC
TATATTGCGTCTACGGTTTCCTCAAAAATGCTCAAAACTATGGCTCSMAT
GGAAGGAAWGCATTTTGAAGTAATTTGCTTWGCATATTTAAGACAGATAA
CATAATATGAGGATCTTTGGTTATTACAGGAAACACTCACAGGTTTTAAA
TGGATGTGCAATAAAGCCAAGGAAGTTGAAGATGATTCATCAAAAACGGT
TTTAATGGCTTTTGAAGAATCAATTGGGTATATGTGTGGAACATCTGTGG
GTCTTATTCTATATTCATATATTTATTAAAGCCCAATATATACTTTTCAG
GTTTTAGACAAGGATGGTATTACCGCTGCTGTGCGAATGACTGAACTTAT
TGCTTACTTACACCTTCGAGAATCAGGGAAGACATTATTGGATAAACTTA
AGGATATATATGACAAGTAATTTCATTGATAGCTAGCTAGTAATACACAC
TCCATTATTCTTCTTTTAATCTCAGATATGGATACCACTTTAATATCAAC
TCATATTTTTTTAATCATGACTCAGAATTAACAGCAAGGATCTTTGAACG
GATAAGGACGCTTCATAATGGAGGTGTAAGTTATATAACTAATTATAAAA
GAAAGAAAAAATATTTTCCGTTACAGTATCCAATTTCCATATCAAACGGA
AAATATTCAATTAAGCACATAAGGGACCTCACAACTGGATACGATTCCTC
AATGCCAAATCAACAATCAACACTACCAACAAGTTCTTTAAGTCAAATGC
TGACCTTTACGTTTGAAAATGGCTTTGTCATTACTTTACGTACAAGTGGA
ACAGAGCCCAAATTGAAATATTATGCTGAGCTCTGTGGCGCCCCTGATGA
AAAGTAAGTCTGTCTGGATTATTTGTTAGGGGCTAATCGATAAGGATTTT
TAGGTGTAAAAAAATTAATAGGACAGTCGATGAATCGGTCGGTATTTTAT
CTTCTTGAAATAAGTGAAAATATAACCCAACCAAAAACTATATAATTCTC
CTTATCACCATAGCAAAACTGATTATTTGCAAAGTTTAAAAAAAATCGTC
ATCCAATTATATTTTTAAATTGTGGATTCAGCTATACTACCTATATATAA
ACGGGGCCGTTGGGAGTTCTCGAAGATAGGAAAGGGGGCCTCCATTTTTA
TACGTAAATATTGATTACGAGTTTGAGCAAGGAGCCTATCAAAAATGACT
GCAGTTTTCAACGGTTATGTTGAGTATTTACTCAATTACCCTTAGCTAAC
TATATCATGCTCAGTGTTTATGAATAAAATAAACATCTGTAGATATGAGA
TAAACTCGAATCTCTAGCAATATTCAGGCATTCCTATAAAAACGACGACG
GATACGTATGGACCCGATGCAAGAATATTCTAAAAGCATTATATTTTTAG
TTGAGGATATTATGACAATTAACGTTAATTGAGTAAACGCACAAAATAAA
CTAATAACTAATTAATTTATCAGACACTTATATATCGGCTGKCCTCTAAT
TTCGAATCTTKACTATTACATAGGGATCATAAGAAGATTGAGGCTTTGTG
TAAGGAGATGATCAATGCCACCTTGGAAGAATTTCTAGAACCGAAGAAAA
ACAAGCTCAAACCCCAGGAGTAA
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