EMLSAT00000007197, EMLSAT00000007197-703044 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007197
Unique NameEMLSAT00000007197-703044
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:384554..386281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007197 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007197EMLSAG00000007197-689963Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031608EMLSAE00000031608-740536Lepeophtheirus salmonisexon
EMLSAE00000031609EMLSAE00000031609-740537Lepeophtheirus salmonisexon
EMLSAE00000031610EMLSAE00000031610-740538Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777121auto777121Lepeophtheirus salmonispolypeptide
EMLSAP00000007197EMLSAP00000007197Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007197

>EMLSAP00000007197 ID=EMLSAP00000007197|Name=EMLSAP00000007197|organism=Lepeophtheirus salmonis|type=polypeptide|length=84bp
QVSSNCHFTTCDPNIYIEFDDKDVQNVGTSDDIANVRHCSGYYVIDYIPL
KTRLYGENCGRPAYRHVYSSCYIRFYRLSDSESX
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mRNA from alignment at LSalAtl2s404:384554..386281-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007197-703044 ID=EMLSAT00000007197-703044|Name=EMLSAT00000007197|organism=Lepeophtheirus salmonis|type=mRNA|length=1728bp|location=Sequence derived from alignment at LSalAtl2s404:384554..386281- (Lepeophtheirus salmonis)
CAAGTATCTTCAAATTGTCATTTCACAACCTGCGATCCAAATATTTATAT
AGAATTTGACGATAAGGATGTTCAGAATGTAGGAACCTCGGGTTCGTATT
ATTTTGTACATTTTACATAGGATTTAAATCATAAGTAAAATAATTCACCA
TATAAATGGATAACTTATTACCAGTGGTACCAATCAGGGCCGTCACTTGG
ATATTTTTTTGGGTGGGGGCTGATTTTTCAAATTTTTGCTGACGTACATC
CCATTTTTTCCGACTCAATATGAAAACATTTGTTTTAGAAAATAAAATGT
GGGTCTTTTCTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNAATGACTATAATTTTTCTTAAATACAACTGATTTTTTCCGACTCCAA
TAATCGATGAAAGTGTCCTGATACCCATTAGTGTCATGTTGGACCTTATT
GAAGACCGAGGACCGCGGCTAGCCCCCTTTGTCGGTTGTTAAAAAAGGTA
AAATTAAGTCCTGGTGACGTCATTGAGAGTATTTTACCCAATGTTATTGG
CAGGGATATATATCATCTATATTTTGATGATAGCTCGTTTTTTCGGAGTT
GATCATCAGCATATGTCATGATTATTTCATTCTTGAGTAGTGAGCATTCT
TTCATAAAGAGATTCAATTATATTCAAAACCCGATTAAACATTCGTGTGT
GCTCAAAAAAGACTAAAAAGCTTAACCTTGAGCATTTGTTGTAGAGTTAT
AATTGTAAGGCCTAGTTGGACTCAGAGTAAAATTGGGGATGGATTTTGGA
GTAACTTTTGTCACTGTTTTTGTTTATTTTCTCCCCCCCCCCCCTCCTTK
TCACAGCTGATTGTAGCTGATCTCCTCCAAAACATTCCTCAAATTGTCAG
TCTTACCAGATGTTGATTTTCAGTTTCTTTTAATAAAAACCACTGAATTA
TCACAAAAGATATCTTATTGGGCTTAGTAAACCATTAACCTTTTTTGAAG
AAATTTCAAGAACCGATATCACCTAGGGTCCACTTTAGGGGGAGGGGGAT
GTAGCCCCTCTCAGAATCATTTTCTTAAATAGGAATACATTTTTTTTCCT
TCAAGGATTTAGATTCTAAAGAAAACGTCAGTTGATCAAATTCAGGGACG
ACATAAATGAAGTTTCTTTTAAAAAAAACAAAAAAAAAAACTAAGCCCCT
CCTAAGACTGTATTGGACCATCATTTTTATTATTGTATTCTATTTTGACT
TCATATTAAGCAATCCATCCATGATGTTGTTGTATTACGTACCTAATATA
TTTATTTTAGATGATATTGCCAATGTTCGACATTGCAGTGGATACTACGT
CATTGATTATATTCCTTTAAAAACTCGCTTGTAAGCAATTTCCTAAATTA
TAATTGTATTTATTTTTACATCTTATTTCATTAATAGATATGGAGAAAAT
TGTGGACGTCCAGCCTATAGACATGTTTATTCATCTTGTTACATCCGCTT
CTATCGACTCTCAGATTCAGAGTCTTKC
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