EMLSAT00000007227, EMLSAT00000007227-703074 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007227
Unique Name	EMLSAT00000007227-703074
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s404	supercontig	LSalAtl2s404:184988..189369 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007227 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007227	EMLSAG00000007227-689993	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000031719	EMLSAE00000031719-740647	Lepeophtheirus salmonis	exon
EMLSAE00000031720	EMLSAE00000031720-740648	Lepeophtheirus salmonis	exon
EMLSAE00000031721	EMLSAE00000031721-740649	Lepeophtheirus salmonis	exon
EMLSAE00000031722	EMLSAE00000031722-740650	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774093	auto774093	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007227	EMLSAP00000007227	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s404:184988..189369+

protein sequence of EMLSAP00000007227

>EMLSAP00000007227 ID=EMLSAP00000007227|Name=EMLSAP00000007227|organism=Lepeophtheirus salmonis|type=polypeptide|length=283bp
MELKPRQDFQNGFGDQSNLTKTIQSSIIIPLQAAREKNPAPRTSEKNQAV
TAKIFGMQIFVKTLTGKTITLEVEXSDTIENVKTKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE
PSDTIENAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN

mRNA from alignment at LSalAtl2s404:184988..189369+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007227-703074 ID=EMLSAT00000007227-703074|Name=EMLSAT00000007227|organism=Lepeophtheirus salmonis|type=mRNA|length=4382bp|location=Sequence derived from alignment at LSalAtl2s404:184988..189369+ (Lepeophtheirus salmonis)
ATGGAGTTGAAACCAAGACAAGACTTCCAAAATGGATTTGGAGACCAGAG
CAATCTCACGAAAACCATACAATCATCCATAATTATTCCACTCGTAAAAT
CAGTTATTAACTATGAGCAATAGTAACATTTCCCAAAGGAAATGATGGCA
TCAATGTCTAGTCAATCAGTATATGAATGACAGTGTTATTAATAACACTA
ATTGAATACTACATTATGAGACATATCAATTAAGACTTGTCCAAGTATAA
ACTTCCCAACAAATACATACCAGCTTTTATAGGTAAATTAATGAGTAATG
AATAGTAAGAACTACAGAATCATTGTCATATATTTTCGTTTGGACTTTAA
ACAATAACTCAACAGCAGACTATATTGATCGTTGTTAAGAACAAAGTCCT
AACGTGCTGTAACTAAGTGATTATATAAAAACAGTTGTTTAAATCAATAG
TTTCCTTGCAAATCCCCATGAGTAACATGGACAGAGGATATTGATTTATG
TGACATTATAATTTTTTGGCAGACGCTTTGTACTAAATAAATTTAATAGC
TTTGAGAATATCACTTAGAAAATGGTCTATGTATTCATTTGATGATATTA
TCCTATTCAAATTGAACATTTTGTCAAATTTAGGGCGTACACTACCCGTC
ATTTCAAATATACAATATTTAGAAGAGGTACAAAATGGCTGSTCCTCTCC
AATTTCTCTAACAAAGAAGGKCTCTTTCTCTATACATTTCAATTCCACTC
TCTTTTATTTTATAATAACACTTATGTTATGTTCGACAATTCTTTGTTAC
CTCCTTATCATCCAGTATATTATTATTAGCCTAATATGATGAAATTTACT
CTAAATGACAATGGAAAATCAAGAGAGAATTCTTTCGCCATGTTCTTTAG
CTTTTTATTCATTACGATCAAAGTTCAATGATACAACTATATAATTAAAT
ATAGCAGTAAATTATGTACTAATTTATTAATAATAGATAAATTCTTTGTT
CTTTTTACAAGTTATTTTCTCTTTATAGCATATTAGTAGCAGGCTGCCAG
GGAAAAAAACCCAGCTCCTAGAACGAGCGAGAAGAATCAGGCAGTGACAG
CCAAAATGTCATTTATGGCAGRCTGGCTTGTAAGGAAGCTTTGTGACGTC
GCTTATGAGAGCAGGAAGGTTTCTTTTCATTCTTCTCCAAAAAGCTAGCT
TCATTATAGAAGGAAACGCTCAAGGAGACGGACGTAGAAAAGATATAAGA
GACCAAAATTTTTATACCTCATTAAAATTACCTATTGCTATATAATTCAG
ATTAAATTACATCGTAAGTGCTCTTAATTATACTTGATATGTTGTATTCG
TAAGGGGATAATTGGGGTTCTTATTTAATTTATGTAGTTTTCTTTGTCTG
GTGGGGGGGAGGGGGGAGTATTTTTAGATAATTGATGAGTGAGAGAAGTM
CCAGCCGCCATTTTGAAAGAAAGAAAAAGTAAATTAAGGACATGTAAATA
CATAAAAAAATTGTCAAAATGTTTTTTTGGAAATTATTTTAAATTATTTG
TGCTTTCTTTGTTTAATTGGATATTCTTTTATTTTAATTTTATTATCACT
TATTACTTAGATTCGGGATGCAAATCTTTGTGAAAACTCTCACGGGTAAA
ACCATCACACTTGAAGTGGAAGSTTCAGACACGATTGAAAATGTCAAGAC
CAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCAGCAACGTTTGATCT
TTGCTGGAAAGCAATTGGAGGATGGACGTACATTGTCCGACTACAACATT
CAAAAGGAATCCACTCTCCACTTAGTCCTGAGGTTGAGAGGAGGAATGCA
GATCTTTGTCAAAACTTTGACTGGAAAGACCATTACGCTCGAGGTTGAAC
CCTCAGATACCATTGAAAACGTTAAGGCCAAGATTCAAGATAAGGAAGGA
ATTCCCCCAGATCAGCAGAGACTGATCTTTGCTGGAAAGCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTATAACATCCAAAAGGAGTCCACCCTTCACTTAGTCCTCAGATTGAGA
GGAGGAATGCAGATTTTCGTTAAAACCCTCACTGGAAAAACCATCACWCT
TGAAGTGGAAGCTTCAGACACWATTGAAAATGTCAAGGCTAAAATCCAAG
ATAAGGAAGGAATTCCTCCAGATCAGCAGAGATTGATTTTTGCTGGRAAA
CAATTAGAAGATGGACGTACTTTATCAGACTATAACATTCAAAAGGAGTC
GACCCTTCATTTGGTCCTTAGATTGAGAGGAGGAATGCAAATCTTTGTTA
AGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTCAGACACA
ATTGAAAATGTTAAAGCCAAGATCCAAGARAAGGAAGGTATTCCCCCAGA
TCAACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACKC
TTTCAGATTATAATATTCAAAAGGAATCCACTCTTCATTTAGTASAGATT
GAGAGGAGGAATGCAYATTTTRGTRAAAACCCTRACTGGWAAAACNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAATCACTCTTGAAGTTGAAGCTTCTGATACTATAGAAAATGTTAA
GGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAGCAACGTTTGA
TCTTTGCTGGTAAACAATTAGAGGATGGACGTACTTTATCAGACTATAAC
ATTCAAAAAGAGTCCACGTTGCATTTAGTTTTAAGACTTAGAGGTGGTAT
GCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTG
AGCCCTCTGATACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAG
GGCATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGTAAACAATTGGA
AGATGGACGCACTTTATCCGATTATAACATTCAAAAAGAATCTACCCTTC
ACTTGGTTTTGCGCCTTCGTGGTGGAAATTAA

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