EMLSAT00000007228, EMLSAT00000007228-703075 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007228
Unique NameEMLSAT00000007228-703075
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:613982..614914 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007228 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007228EMLSAG00000007228-689994Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031723EMLSAE00000031723-740651Lepeophtheirus salmonisexon
EMLSAE00000031724EMLSAE00000031724-740652Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778902auto778902Lepeophtheirus salmonispolypeptide
EMLSAP00000007228EMLSAP00000007228Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007228

>EMLSAP00000007228 ID=EMLSAP00000007228|Name=EMLSAP00000007228|organism=Lepeophtheirus salmonis|type=polypeptide|length=290bp
MRSTEHLSLKWNSFDSNFKESLSDLYENEELFDVTLITGSRQIKAHKFVL
CACSPVFRSIIKSAPPQTHPWIYLKGINVDHLELLISFLYHGEVKVIQEE
LDDFIAIAKEFEIKCLNTEKMPTSLNDSPTPSPPRDLPDLSSVDNVSDDL
LSISPPTAQIEKYYTPYEMNDLYIAQNISPDKFETMETNNKDIKLDKNKK
HIRALDLEINRYYTKQRTGKKFQCKKCSYLTPYGNAIRNHVESNHISSKG
VVCTLCSKKFKTRLSLHNHCYRVHNDNGSNVSFKASRKTR
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mRNA from alignment at LSalAtl2s404:613982..614914-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007228-703075 ID=EMLSAT00000007228-703075|Name=EMLSAT00000007228|organism=Lepeophtheirus salmonis|type=mRNA|length=933bp|location=Sequence derived from alignment at LSalAtl2s404:613982..614914- (Lepeophtheirus salmonis)
ATGAGATCTACAGAGCATCTTTCTCTTAAATGGAATTCGTTCGACTCCAA
TTTTAAAGAAAGTCTTTCTGATCTTTATGAAAATGAAGAACTTTTTGATG
TGACACTCATAACTGGATCGAGGCAAATCAAAGCTCATAAGTTTGTTCTC
TGTGCATGTTCTCCCGTGTTCCGTTCCATCATTAAATCTGCACCACCTCA
GACGCATCCCTGGATTTATCTTAAAGGAATTAACGTCGATCATTTGGAGT
TGCTCATTTCCTTCTTGTATCATGGAGAGGTAAAAGTTATTCAAGAGGAA
CTCGATGATTTCATTGCTATTGCCAAAGAGTTTGAGATCAAATGTCTTAA
TACTGAAAAAATGCCCACATCTTTAAATGATTCTCCTACTCCATCTCCTC
CTCGTGATTTGCCTGATCTTTCCAGTGTAGACAATGTTTCTGACGATTTA
TTATCTATATCTCCTCCAACAGCACAAATTGAAAAATATTATACTCCGTA
TGAAATGAATGATTTGTATATTGCTCAAAATATTAGTCCAGATAAATTTG
AAACCATGGAAACTAATAACAAAGATATTAAACTGGATAAGAACAAGAGT
AAAGTTAATTAATTATATTATTTCACTTCATATATAATATTTGCTTTTTC
CATTTTAGAACACATTCGTGCCTTAGATTTGGAGATAAATCGATACTACA
CTAAGCAGAGAACAGGAAAGAAATTTCAATGTAAAAAATGCAGCTACTTG
ACTCCTTACGGCAATGCAATTCGTAATCATGTTGAATCAAATCATATAAG
TTCAAAGGGTGTCGTTTGTACCCTTTGTAGTAAAAAATTTAAGACAAGAT
TATCTTTGCATAATCACTGTTACAGAGTTCATAATGATAATGGTTCGAAT
GTCTCATTCAAAGCATCTAGAAAGACTCGCTAA
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