EMLSAT00000007229, EMLSAT00000007229-703076 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007229
Unique NameEMLSAT00000007229-703076
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:615898..617297 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007229 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007229EMLSAG00000007229-689995Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031725EMLSAE00000031725-740653Lepeophtheirus salmonisexon
EMLSAE00000031726EMLSAE00000031726-740654Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778916auto778916Lepeophtheirus salmonispolypeptide
EMLSAP00000007229EMLSAP00000007229Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007229

>EMLSAP00000007229 ID=EMLSAP00000007229|Name=EMLSAP00000007229|organism=Lepeophtheirus salmonis|type=polypeptide|length=290bp
MGSIEHFSLQWNSFDSNIKGLSDLYENEELFDVTLISGSRQIKAHKVVLS
ACSPVFRSIIKSAPPQAHPWIYLRGINFHHMELLISFMYYGEVKVIQEEL
DDFIAIAKEFEIKCLNTEKMPTSLSDSPSPPPPRDLPDLSSVDNVSDDLL
SISPPTAQIEKYYTPYEMNDSYIAQNISPDKIETMETNNKDIKLDKNKKH
IRALDLEINRYYTKQRTGKKFQCKKCSYLTPYGNAIRNHVESNHISSKGV
VCSLCSKKFKTRLSLHNHCYRVHNDKGSNVSFKPYRKTKL
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mRNA from alignment at LSalAtl2s404:615898..617297+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007229-703076 ID=EMLSAT00000007229-703076|Name=EMLSAT00000007229|organism=Lepeophtheirus salmonis|type=mRNA|length=1400bp|location=Sequence derived from alignment at LSalAtl2s404:615898..617297+ (Lepeophtheirus salmonis)
AAAAAAAATTAACAACCACCTTATTCCATAGCTTAAATGTCCTTGTTGTA
GGACATAGTTTCTCTAATCGGTTTTGAGTAAGAAACATTCAGTAGAACTA
CAAATTTTGATAATGATCAAAAGAGGTATAAACATTGCTCAGATATGTTT
TTGGGCGAGTCCATAAGTTGAAAAGGGTCTACTTACGTTGAGAACCACTA
CTTTAGAGTATGTTTACTTACTTGGATTAGCTGGTAAGTACGCTATTGTT
CGTTAATATTGTTAATATTTCAAGTACTCAATGATTGTATGAGATATCAT
TAGAGTGAGAAATCAATAAACCACAATTAAATATTAATACCTCCAAATTA
CTAGTATTATTATAATAAAGTTAAAATCCAAAATGGGGTCTATTGAGCAT
TTTTCTCTTCAATGGAATTCCTTCGACTCCAATATTAAAGGTCTTTCGGA
TCTCTATGAAAATGAAGAACTTTTTGATGTGACACTCATATCTGGCTCTA
GGCAAATCAAAGCTCATAAGGTTGTTCTCAGTGCATGTTCTCCCGTGTTC
CGTTCCATCATTAAATCTGCACCACCTCAGGCGCATCCCTGGATTTATCT
AAGAGGAATTAACTTCCATCATATGGAGTTACTCATTTCCTTCATGTATT
ATGGAGAGGTAAAAGTTATTCAAGAGGAACTCGATGATTTCATTGCTATT
GCCAAAGAGTTTGAGATCAAATGTCTTAATACTGAAAAAATGCCCACATC
GTTAAGTGATTCTCCATCTCCACCTCCACCTCGTGATTTGCCTGATCTTT
CCAGTGTAGACAATGTTTCTGACGATTTATTATCTATATCTCCTCCAACA
GCACAAATTGAAAAATATTATACTCCGTATGAAATGAATGATTCGTATAT
TGCTCAAAATATTAGTCCAGATAAAATTGAAACCATGGAAACTAATAACA
AAGATATTAAACTGGATAAGAACAAGAGTAAAGTTAATTAATTATATTAT
TTCACTTCATATATAATATTTGCTTTTTCCATTTTAGAACACATTCGCGC
CTTAGATTTGGAGATAAATCGATACTACACTAAGCAGAGAACAGGAAAGA
AATTTCAATGTAAAAAATGCAGCTACTTGACTCCTTACGGCAATGCAATT
CGTAATCATGTTGAATCAAATCATATAAGTTCAAAGGGTGTCGTTTGTTC
CCTTTGTAGTAAAAAATTTAAGACAAGATTATCTTTGCATAATCACTGTT
ACAGAGTTCATAATGATAAGGGTTCAAATGTCTCATTCAAACCATATAGA
AAGACTAAACTATAATTTTAACATTATGTAATACTTTTGATTATATTATT
TTTTCTAATTTTTTGCACGATTAGAATAAAGGGTACTTTTCATAGTTTCA
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