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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s405 | supercontig | LSalAtl2s405:240473..246391 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000007235 >EMLSAP00000007235 ID=EMLSAP00000007235|Name=EMLSAP00000007235|organism=Lepeophtheirus salmonis|type=polypeptide|length=96bp
MNGLIKFYLDFVRISQLTNVACRKHDSHQNWYRGEIVNXVRINGDLFVQI
FLIDYGEFLPTVPVESCVRKLLNSEMRPNLERGHCVQSSQRPALII back to topmRNA from alignment at LSalAtl2s405:240473..246391- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000007235-703082 ID=EMLSAT00000007235-703082|Name=EMLSAT00000007235|organism=Lepeophtheirus salmonis|type=mRNA|length=5919bp|location=Sequence derived from alignment at LSalAtl2s405:240473..246391- (Lepeophtheirus salmonis)
ATGAATGGATTAATAAAGTAATTAAAAACATGACACAGATATATTATATG
TTTACAAAATATAATGTAAATAAAATATAAATCGTTATTTGTCTGGAAGA
ATTCATTTGCGATACTCACTTGTTAAATCTGGGTAACCATATTTTAATTT
CCAAAAAAAGAGGGCGTTTCGGCTAATGGATCATCCAGCGGTTGCATTTT
GAACTACCACTGTTTTTTACGTCTGACAGCTGTAGTAACATTCTCNTTGT
GTCTAATATTTTGTAAAAGGTCTCCGGTTTACGAAATGGTTAAGTTTACG
CTCGAAGAAATTTGGGAAATACTGAAGACTTACTTCCAAAATCGAGAGTC
TTCAAACGAAACTGCAAGAAAATTACGTCGGMCGAAATAAAGCGCCTTCC
AAACAGTTTTTGGATAAATTTGTGAAGCGTGTGCGCGAAACTGGTTCGTT
AATGGATAAAACAACGCGTTCCCGTGTTCGTCCAGTGCGCTCAATCGAAA
ACATTGCTGCTGTTGCCYAAAGCGAAAAAACGAGCAAGGASCTGCCGTTA
AGGTCAATGGTGAGCGCTATCGGACCATGTTGGAAGATTTTTTGTTTCCC
CAAATGGAAAAGGAAGACATCGATGACATTTGGTTCCAACAGGATGGCGC
TACGTGCCCCACATCCAACGTTACAGTGGATCTTTTGCACACTGTCTTCG
ATAATCCCATCATAAGCCGAAAAGACAACGCCAACTGGCCACCTCGTAGC
TGCAATTTGACTACGTTGGACTATTTTTTGTGGGGAACCGTCAAGGATAA
ATGTTACACCAACCATCCAGAGACGATTGACGATTTGAAACATGAAATTG
GAGTCGCCATTGCAGCTATTGAAGCTCACACAATCGAAAATGTATTGAAA
AATTGGATCMACAGAATGGGCTACTGTAAGACCAGAGACGGCGACCATAT
AAACAAAGTGGTGTTCCATTATTAACTGGAATGTTGAGGCTTTCAAATAA
AAAAAAACGATTGAAAAATATCCATCTGTCTTTTTTTTATAGCAATATCA
AAAGAAAAAGTTTCGTGGCCCACTCTTTATAAGGTTGATAATTTTGGTAA
GAATACAAAAGCGTGCAAGGAGAAGGGAAGAAATACTTATGGCATCATTG
ATTAAATAACATACATCTTCTTCCATCAAGAATGTTATCATTCCCGCCTT
TCNNNNNNNNNNNNNAGATGGTGATAGTCGATAGAGAACTGAATAAAATG
CCTAAAATAACGTCGCTTTCTGTCTGGATTTATGAAAATGGAGGCCCAGG
AATTTGGAAAATACTTAACGGATGAGAAACAGATGGCTTGTTGGATTTTT
CGATATAAATGTGCCTTTAGCCCCCTGTCTAGAATTACACGCCACTCATT
ATCCTCATTTCATAACAAGTATATTCATCTATAAAATCAAAAAATTTATG
GAGAAATACACGAGTAAATTCTTCCCTTCCCGAGGAACCATCATTATTTA
ATGGAGGATGTTGGTAATGATGTCATTGATAGAAATACCCCCATTGTAAA
TTGGGAAGTTAAGATAATTTTCAGCATGTTTAGAGTCATCCACAAAATTA
TCAAGAATTATGATACACAACTCATCAAATGGCAAAGACAAGTGCTTAAA
TGGGCACAACAACGGGAGTAGTAGCTTTGGATGGTTCGTAACTAGTTTGC
CTGGTATTAGTTTCTTCACTTAAAGACTTGGGTATGATCATTAGGTTTTC
CAATATTACATAATCAATAAATGTTACTTTTTTATCACTTAAGGATTAGC
TATAGGTCATAAGCTCCAAGAAATGGTGTTCAGAAAACTCATAAAAGGGA
AAATCAACTGCTTAAATATTCACAACAACAGGTGTAGTTACATTGGGTGT
AGCATTATAATTAGCAATTGTGTATATCTTTCATGATAATAGTATGTTGT
TATACAAGCATAAATAACGGGGGGGGATCTTTTTTGATKCTCTTAATAAT
ATTATAGTTATATCGGCGGACATTACTACATAATTATTTTTTGAACTAAA
TCTTTACAATGGATTTAATTCTAACATTTTTATATTAGTATATTTGTTGT
CTAATTTTACGATTTTGATATTTACCTTATTATTAATAATTATGTGGATC
TCATCAATAGAGATATATCTATCCTGTGCACAATTTTATATAGTAACTTC
CACATTAGGAAAAAAGGGTGATGATCTTTTTGATTAAACTCCACGTCTCG
CTTGTGTTTTGCAACCTAAAGTTATGAGATATTTAACTGAATTCATGTCA
GAACAAGAAAATATTATTTGGATCAATCTATTATTTCAATATTCTGTATT
TATAATTTATTGTTATTATTAGTTATATGATTACAATTGTTTAATTTTGT
ATATTTAACATAAATATATGATGGTTTATTTTTTAGTATGTAGATTATAT
TTAATTTAAGCCTTCTTTTTAAATTTGGAACTTCAAATATATTTCGAAAT
ACTCTACTTCGTCGTTCCATTAGTTATTATTCTAAGAATATGATTCATAA
TAAATTACAATTTCATGGAGTGTGATTGTAATCAAATCTACTGTAACGGA
TAAAAAACGGATTATACGTAGTATATCTTCATTGAACATTTTGCTAATAA
ATACTTTCGTTATACACTCAAAAATCATAATAAAGTAAGCAGTTGATAAT
CACATCAGTWTTTTAAACAAWAATMCCMYCMKTCTTTCYCCAGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCCCCRTCRCCTTSCKCGCGTTTTTRTCTA
CAYAATTATCAACTTTAATKATATWTTTWTTGAGTCCKGTTGACGGGGGG
GGGGGGMGTKCTRTTCAAAATATCCTTAAAAAATTTTTTTACTCTTATTT
TTGRTTAAAATTTTCATTTTGACGAAGAATTTTTTTCACTAAAAGCAAAC
CTTCCTTCTTTTACGAGGTGCGTAACACCCTGCAGTGAAACTTTCAAAGT
CCACTACGTTGAGAACTAATCACTGATCAACAAACCTATTCAATATGAAG
TATATCAGTAGGAGTGTCCGCAGGGGTGGGTTTGTGACCTCTGATAGAAA
GAAGATGCCTCCGTTCTTTTTCAAGGCTGGACAGAAAATTGATCAGGAGA
CCTACTATAAGGCGTCACTATTGTAGAATTTTCAATTTAATGCATCGTAT
TCCCGACTGCTAGGCAACAGAAACAGATTTATACAAAACACGCAACCAAT
CATATTTTATGACGTAAATATAAAAAACCGTGGAAGAAGTCAAACATCAT
TCGTACACGCGTTATAGTCTAACCTTATATTTCTATTAACATTGGTTGAA
TAGAATAAATCAATTTGACATCGTCTATTTATTAGAAAAAGATGAATTAA
GATTTTTGTTAAATGGATAATTGAAGAATGGCAGGCTATTTTTTATTTCT
TTTCCAGTGTGTAAGCTTCAAGTTTCCACCCAGTCTATTAATTTTTTAAT
ATTTTAATTTATATTTAAAATTGTCGTTGGCGTAATTATTACTTAATTTT
GTAAACTGCAGAGAATAGATTATTTCCAATTATAAGTTTAATATAATAAA
TGAGTAATTAAGTATTAATAAAAGTCACTAGACTTGAACGTAAATGGAAG
AACAATCTCCTAAAATTCTACATTTTTTAAATAAATTCAGTTAAAAAAAA
AAAAGGTTTCGTGGGCAATTAATATGAAAAGTTCCGAAAATTACTATGTA
CTTAAAGGACCTTGTATGTATATAAGGAAATAAAACAAAATTGTACWCCA
AATCCAATGTTTGCCTAATGAACTTTTCGTATTTGATAAAAATATAATAA
TAGAATTGTGGTATTGTCCTAAATATAATGAAAGACTGTTAAAGAGATAT
TCTATTCTCGTCGCCAAAGCACAAAGAATTAACCGATTAACTGAAAATCA
CGGAATCGAAAGGAATTGGTTGTAGAAAGGGAATTAATACGGACATAGAG
TTTATTTGTTATAAGATCAAAGAAGACTAAATAAGAGAATAATTAATGAG
GAGAATAAAAGGCATGGATGTAAGAATGTACGTTTGTGATTAATAACATT
ATCTTTGAACTAGAATAAATAAATTATTGGGTTAATAAACCCCCAAATTA
TACAAATCTTCTCTAGTTGAGCGAAATCCGTCTTCTGGACTTCGAATGAA
CATCTTCTAAAAAGTAAAATATATTAGATAACATCATAATCGCTAATTAT
ATCTCCAAATAATAACTAAACAGTACCTCTAGCGAAGAAAATAAGTTTCT
GTCTACCAATACATTTTTGAGCTATTGACTATTGATCACGTGGTTCCTCG
TTTCGCTACTTGTTTTAATACTTTAGGTTGCAGTATTTTAAGGTTGGCAC
TGGAGGGGGTATGTTCAATTTTACTATTTAGTATTTTGAAATTAATAATA
AACATATTTTTTGATCTTGTTCTTTTCTTTTAACAGGTTTTATTTGGATT
TTGTTCGAATAAGTCAATTAACAAATGTATGTCCCGGCCATTGGTCCGTA
CATTAGTGCGTCCGCATGATGATATTATGGGGGTTTACGTTTTCTTAGAT
AATAAATCTTTTTTTTTTTGGGGGGGGGGGGACCTGGGGACGCCTCTGAC
ATTGCATTAATATATATAAGTCCGTCCCATGCCAGAACCTAAACAAATGA
AAGTATGCCTGGGGTAAAGACAACAGTTCCTTACTAATTGTGAATAAAAT
CTAAATATGACAATAGTCTGTTTAGTCCGGGTTTCTTGAGCTGTAGAAAA
ATTTTCATTTGATGATCCTTTTAATTAGATCCATTATTTATGCAAAAAAG
AATAGAATATTACTTTTTTGCATTGAAAGAGTTTGTCATACATCCGGAAC
TAATTAGCCGGACTGTTTGGATATTGTAGTATTCACACTACAGAGTACTT
TAATCCTTTGTKTTTTTAACATAACCTTTCTAGTTTGTAGTTATCCAATT
GTAACTAAGAGGTAAACATAAAGTATAAAATTAATAACAATATTATTTGA
ATATTTAATATTAAGTTCTAGAAATGGCTTCGTATCGAGATGAAGGAGAC
TATTTCGTTCGGGTTGGAACTGTTATGACTCCAAATACATTTTGGGTCAC
AAAGATGCCTTTGGGTTCTAAAATCACAGATACTCAATTTGGCAAAANNN
NNNNNNGACATGGAATACAATTTACAAGAAAAATACAACGTGAGAGGTGC
TTTAGAGGATATCTCGGAATTAATTCCCACCATAAGAGTTGGAATTCGAG
TAATGAGCGGATTAAACTCCACATTTAATTAATAGTAATTATACTAAATA
ATTGTTGGTACATTATATTTATAGGTGGCTTGTCGAAAGCATGATTCTCA
TCAGAATTGGTATAGAGGAGAAATAGTGAATGKTGTACGCATAAATGGAG
ATCTTTTTGTTCAAATTTTCCTTATCGATTATGGAGAATTCCTTCCCACG
GTTCCTGTGGAGTCTTGTGTCCGTAAACTCTTGAATTCTGAAATGGTTAC
ATTTCCGCCTATGGCATTTCAMCYCCTTCTAGCCGGTAATTATTTGCAGG
GCCGTCCTTAAACATTTCGGATCCCTACATGAAATGCCAATCCCAATTTG
AATAGAATTGACAAGGAATTTAATGACGAATCATAAATTATTTTATAAAA
TAAAATGCTCTGTTTTTAGAGAATATATTTCAAATGAACTATTTCTTAGA
AAAGGCATTTCTCACTTTCAAATCCTTATTTAAAAAGAATATTTTTTTAA
GATCAGAGGCCTAATTTAGAGCGGGGTCACTGTGTGCAGAGTAGTCAAAG
GCCGGCCCTGATTATTTAA back to top
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