EMLSAT00000007262, EMLSAT00000007262-703109 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007262
Unique NameEMLSAT00000007262-703109
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s408supercontigLSalAtl2s408:472946..475434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007262 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007262EMLSAG00000007262-690028Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031876EMLSAE00000031876-740804Lepeophtheirus salmonisexon
EMLSAE00000031877EMLSAE00000031877-740805Lepeophtheirus salmonisexon
EMLSAE00000031878EMLSAE00000031878-740806Lepeophtheirus salmonisexon
EMLSAE00000031879EMLSAE00000031879-740807Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777983auto777983Lepeophtheirus salmonispolypeptide
EMLSAP00000007262EMLSAP00000007262Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007262

>EMLSAP00000007262 ID=EMLSAP00000007262|Name=EMLSAP00000007262|organism=Lepeophtheirus salmonis|type=polypeptide|length=552bp
MNSMAEERKELGADSIKTAAESLGLSSILHEDAAKELAEHLTYRIRMLIQ
DAQKYAFHGKRSKVQSEDLDYALRMEGQEPLYGMSCCEYIPFRYASGGGM
SGGGSGXVGLSNNNNNVSSSCSALCKEVYFLEDKEIDLSTLISSTPLPKI
PMAVSLRSHWLAIDGIQPMIPENPPAKSKEMLKKESSDPLAKLSSREASD
NKFSSLLAKLKSTETVTVKQLATHELSVEQQLYYKEITEACVGSDEGRRA
EALQSLACDPGLHQMLPRLCTFIAEGVRVNVVQHNLAILIYLMRMVKSLL
ENQTLFLEKYLHELLPAVITCIVSRQLCSRPEVDNHWALRDFASRLMNNI
CKNFNTSTNNLQTRVTRLFSEAMKNESSPLVSYYGAIAGLQELGPEVIKV
FIIPYLKQISKQIDRAQDSNLGSSNVEKTASTHIRNSIVKFTSPVLKTIR
PLPDLIEEYKADYGSLGAYLHAGVQRSRGTSGSASSAGGGSGXSGSGGGG
KAPNTSNVTPGNVGGTKILQSKPPGSGASGSGSTQRIIVVNNQRIVQGGG
SI
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mRNA from alignment at LSalAtl2s408:472946..475434+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007262-703109 ID=EMLSAT00000007262-703109|Name=EMLSAT00000007262|organism=Lepeophtheirus salmonis|type=mRNA|length=2489bp|location=Sequence derived from alignment at LSalAtl2s408:472946..475434+ (Lepeophtheirus salmonis)
GAACTATGACTTCCTTTCCTGTTTCATCACTAATTAGTAATTACACTTGA
ACTTTTCCCATCCTTATTCTAACATGTTATTGCTTGCGCGTGAATGCTTC
CACGCTGGAATAGAGTCCAGACGCTTGATATCTTGAGCCAGGGATGAGTG
AGATCTGGATTTGGCCTACTACTATTGAAGGGTGAGGGTTCTGGGCTAAA
TGAATGGGGGTTGTTAAGTGTGTGTTGTAGGGTGTTGAGCGTGCGTTAGT
TGGTTTAGGTGGGCGCAGAATTGTTTATACGGGATTTTAAAGAAGTAAAC
AAGAGAGGAGAGGAGAGGAGAGGAGACTTTAGACGACTGGACTGAATTAA
TGAATTCAATGGCAGAGGAACGGAAGGAGTTGGGAGCGGATTCCATCAAG
ACAGCAGCCGAGTCCTTGGGCCTCTCCAGCATTCTTCATGAAGATGCGGC
GAAGGAGCTAGCGGAACACTTGACTTATAGGTAAGGATTGCTTGGTTGAT
TGCTCCTACAGAGTGTTTGACGTGTTGTTCCTTGTGGGCCTCGCACACAG
GATTCGGATGTTGATTCAAGATGCCCAAAAGTATGCGTTTCACGGGAAGC
GGAGTAAAGTTCAATCTGAAGACCTGGACTATGCTCTTCGGATGGAGGGT
CAGGAGCCGCTGTATGGGATGTCGTGTTGCGAGTACATTCCGTTCCGCTA
TGCCTCTGGCGGAGGCATGAGTGGTGGCGGGAGCGGGAGMGTGGGCCTCT
CCAACAACAACAACAACGTGAGCTCGTCTTGCAGCGCCCTTTGCAAAGAA
GTGTATTTCCTGGAAGACAAGGAGATCGACCTCTCCACTTTGATTTCCTC
CACTCCCCTCCCCAAGATCCCAATGGCAGTGAGTCTGCGCTCTCATTGGT
TGGCCATCGATGGTATTCAGCCCATGATTCCAGAAAACCCGCCTGCTAAA
TCCAAAGAGATGCTCAAGAAGGAATCCTCTGATCCTCTGGCTAAGCTGAG
TTCCCGAGAAGCGAGTGATAACAAGTTTTCGTCTCTGCTTGCAAAGTTGA
AATCCACAGAGACGGTGACGGTGAAGCAACTCGCAACGCATGAACTCAGT
GTTGAACAGCAACTCTATTATAAAGAAATCACGGAGGCTTGTGTGGGTTC
GGACGAGGGACGTCGTGCCGAAGCGTTACAATCCCTCGCCTGTGATCCTG
GACTTCATCAAATGCTTCCTAGACTCTGCACTTTCATTGCGGAAGGTGTG
CGTGTTAATGTGGTTCAACACAACTTGGCTATTCTTATTTACCTCATGCG
CATGGTCAAATCTCTTTTGGAGAATCAGACCCTTTTCCTTGAAAAATATC
TCCATGAACTTCTACCTGCCGTTATTACCTGCATTGTAAGTCGACAATTA
TGTAGCCGTCCTGAAGTTGATAACCATTGGGCATTGAGAGACTTTGCAAG
CCGTCTCATGAATAATATTTGTAAAAACTTCAATACCTCAACCAATAATT
TACAAACAAGAGTAACAAGATTATTTAGTGAAGCAATGAAAAATGAAAGT
TCTCCCTTAGTTTCATATTATGGAGCTATAGCTGGACTTCAGGTATTCAC
GAATTAAACTATTATTTATGTTGTGTATCTATCTTGTTTTCATACAATTC
ATATTTTCTAGGAGCTGGGACCAGAAGTAATTAAAGTTTTTATTATTCCT
TATTTAAAACAAATATCAAAGCAAATAGACAGAGCCCAAGACTCCAACTT
GGGAAGCTCTAATGTTGAAAAAACTGCATCTACTCATATTCGTAACTCAA
TAGTCAAATTTACCAGTCCTGTTTTGAAGACGATTCGGCCATTACCTGAT
CTTATCGAAGAGTACAAAGCTGATTATGGTTCACTTGGTAAGTTCACATA
GATGGTATTTCCAAAATGACATGTATTTTGATTATATATCCTCTGTAGGA
GCTTATCTTCATGCTGGTGTACAAAGGTCTAGGGGCACTTCAGGCTCTGC
TTCCAGTGCGGGTGGCGGGAGTGGTAGMAGTGGGTCTGGCGGAGGAGGAA
AGGCMCCTAATACATCCAATGTCACTCCAGGCAATGTTGGAGGAACTAAA
ATTTTACAATCTAAGCCACCTGGATCAGGAGCAAGTGGATCTGGTTCTAC
TCAAAGAATAATTGTCGTCAATAATCAACGTATAGTGCAAGGGGGTGGAT
CGATTTAAAAACAATTTTGAATGAACTTAGAATTCTATTTTTATAAACTT
TTTTTTTTCCGTCAAAAAATTATTTATTGTTTTTATTTGATATTATTTAG
CATATTATATATATGTATATATATAATTTCTGTGGTCAACTTAGATTTGT
AAGGTATAAATATAACATATATATATATATTTATTTTTTTCTTAACTAAA
ATAAAGTTATGGTTACATTTTATACACCTAAGAAATGTTCTAACTCACTG
CTCAGGAATACATCCCATTATATATTTTTATGCAAATCA
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