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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s408 | supercontig | LSalAtl2s408:679372..686041 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000007270 >EMLSAP00000007270 ID=EMLSAP00000007270|Name=EMLSAP00000007270|organism=Lepeophtheirus salmonis|type=polypeptide|length=600bp
MDFYLDPFEFPAIKKDIRSSFESYVSRFEAAFKKECPMDLDRDPDDIKRD
LFLTVAGEDFLQDLEEILSYPECSSFEVILVSFLAKYKSHEFLLADALEF
RSLEQKECESVPDFVSRVRIKASLLNYHCSEDLEQMILIQTLLGIQDKQL
CQDALENAWNLDELISQSESLDREVVVSLKETDTLVSKSENGAYYDQRAL
EKRNGEDKLYSSPSRQGEVMSLGDAFSQSAVVPTKKICMDVAFNVRGLTI
ALQESEKEEDDASKETKRKILEEILSEFKDDDDDDDESMDKGRRILSAQK
RVQRGKSLKGPLRCNICADFFDDKKKLIRHREKSCKWCSLCFQTRSEFSL
HNVEAHNNTTSQCTLCQKVFTSKSGLDLHMQTMHERNEKFRCGYCGNGFP
IERMLSAHIKRVHLKERKFNCDRCGKRFETSSLLTKHINGVHEKKISAIC
HICSKAFTQDSCYKAHVLRVHENVRNFKCDVCDARFHASADLQKHKKGVH
DKILDYVCEYCKKGFSRNSILQKHIKAIHSNERDFQCSLCSNAYVSKYNL
NRHVQEAHERVKQKCDICLKDIAGFGTGNLAKHKRTAHGIASSNTLIHTQ back to topmRNA from alignment at LSalAtl2s408:679372..686041+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000007270-703117 ID=EMLSAT00000007270-703117|Name=EMLSAT00000007270|organism=Lepeophtheirus salmonis|type=mRNA|length=6670bp|location=Sequence derived from alignment at LSalAtl2s408:679372..686041+ (Lepeophtheirus salmonis)
GCTATCCCGATTATGTCTCCGATCCTTTTCTCTAATACTCCTAGGCTTCT
CATTCTATATAAAAATACGAACGTATAATTATTCAATGAGTTCTACTCCT
TGGTATAAGATCATGTAAAGTTTGATACTAAAAATTGCTAACCTATCCCT
GCCTCCCCTATTTAGATAGTAAAAAAGGAGTATTAAAATGCGCGCGAGAG
ATCTTTCGTTGATGAGCTAGCATTAAATGAAGCGTCTGCTGTATCCTGAT
AAAATATTATAAATGTAGGTGAGTCTTTGACTGTAATMCTMCGMCTTCCA
TATTTTGGCTATAGTGTGACCGCCAGGGAAAGGCTAGGAATATCAATATG
GATTTTTATTTGGATCCGTTTGAATTCCCAGCAATTAAAAAGGACATTCG
ATCTTCATTTGAGAGTTATGTTTCGAGATTTGAGGCTGCTTTTAAGAAGG
AATGTCCCATGGATTTGGATCGAGATCCTGATGACATCAAACGAGACTTG
TTTCTCACAGTGGCTGGRGAGGATTTCCTTCAAGACTTGGAGGAAATTCT
CTCCTATCCAGAATGTTCCTCATTTGAGGTTATTTTAGTTTCATTTCTCG
CCAAGTACAAGTCTCATGAGTTTCTACTTGCTGATGCACTTGAATTTCGG
AGGTAATGTCTCATTTCCCTGCTTCTTCCTTCTTCCAAATGACTCTGGGA
TTAATGTGTTTCTATTCTTTCTAGTCTGGAGCAGAAAGAGTGTGAGAGTG
TCCCGGACTTCGTTTCCCGAGTTCGCATCAAAGCCTCTCTTCTCAATTAC
CATTGCAGCGAGGATCTGGAACAAATGATTTTAATTCAAACGCTCTTGGG
AATCCAGGACAAGCAACTTTGTCAGGATGCTCTGGAGAATGCTTGGAATC
TGGATGAATTGATTTCCCAGTCTGAGTCTCTGGACCGAGAGGTGGTCGTG
AGTCTAAAAGAGACGGATACCCTCGTGTCCAAATCCGAAAATGGAGCCTA
CTATGACCAAAGGGCTTTAGAAAAAAGAAATGGAGAAGACAAGTTGTATT
CTTCCCCTTCAAGGCAGGGAGAGGTGATGAGTCTGGGTGATGCCTTCAGT
CAAAGTGCTGTGGTTCCCACTAAAAAGATCTGCATGGATGTGGCATTCAA
CGTGAGGGGTCTCACCATTGCCCTTCAAGAAAGTGAAAAAGAGGAGGACG
ATGCAAGTAAAGAGACGAAGAGAAAAATATTGGAGGAGATTTTGAGTGAA
TTCAAAGATGATGATGATGATGATGATGAGTCCATGGACAAAGGGAGGAG
GATTCTCTCTGCACAGAAACGTGTTCAAAGAGGCAAATCACTCAAAGGTC
CCCTTCGTTGCAATATTTGCGCAGATTTTTTTGATGATAAGAAAAAGCTT
ATTCGCCATAGAGAAAAGTCTTGTAAATGGTGCTCACTCTGTTTCCAGAC
AAGGAGTGAATTTTCTCTTCATAATGTGGAAGCCCACAATAATACAACCT
CTCAATGCACACTTTGCCAAAAGGTTTTTACTTCAAAGTCAGGCTTAGAT
CTTCATATGCAAACAATGCATGAAAGAAATGAGAAATTTCGCTGCGGGTA
TTGTGGTAATGGATTTCCTATCGAAAGAATGCTATCTGCTCATATTAAGA
GAGTGCATTTAAAAGAAAGGAAATTCAATTGTGATCGCTGTGGTAAAAGA
TTCGAAACCAGCAGTTTACTCACTAAGCATATCAATGGAGTTCATGAAAA
GAAGATCAGCGCCATTTGTCATATATGCTCCAAAGCATTTACCCAAGATT
CTTGCTATAAAGCTCATGTTCTTAGGGTTCATGAAAATGTAAGGAACTTC
AAATGTGATGTGTGTGATGCTCGTTTCCATGCGAGTGCTGATCTTCAAAA
GCATAAAAAGGGCGTGCATGATAAAATATTGGATTATGTCTGTGAATATT
GTAAAAAAGGATTTTCTAGAAATTCCATTCTTCAAAAACATATTAAAGCC
ATCCATTCCAATGAACGGGACTTTCAGTGTAGTTTATGTTCCAATGCTTA
TGTCTCCAAATACAACCTTAATCGTCACGTTCAAGAAGCCCATGAAAGAG
TGAAACAAAAGTGCGATATTTGTCTGAAAGATATTGCGGGTTTTGGAACG
GGGAATTTAGCTAAACATAAAAGAACTGCTCATGGAATTGCCTCCTCCAA
TACACTCATACACACTCAATAAAGATTAGAAATTGTCCATCGAGCAAATT
CCTCTACCTCGATTTTTCTAATGACTTGTTCCTCATTCCTTTACAAAATT
CATTTGTGTACAATAATTAACTATTATATTAATTTATGTGTATGTATTGT
ATATGGGTTCGTCCTTTTATTCATTTTTGTAATCTCTTTTTTGTCATTAT
ATGAAATCCCTCCTTAAAAGAAAGCAGTAAAAATAATTTATTTTAAACTT
TTCCCTTCTTTTCTAGATGAAAATATTTTATCACTTATAAATAAGAATGA
CATCATGGAGTCTGCTCGTATTAAATCCGAAATACTGACGCGAATAAAGA
ATAATGCATCGAAATGCGGGTTAGAATTAGGCTTGGATATTTTGTCTCTC
CTGGCCGAGTATTCTGTTTTCCATGTAATTTATCAAATATTAAACTACTT
GGATTATCTCGATGTTTTTTCTTGTTCAGCTGTTTCAAAAAGTTGGAATT
TCATAATTCAAGATAGTTTGGATCATTCTAAAAAACTTAAGAGAGGTAAG
CCAATACCTACTTATTTTGGTGAAGATAATGACTTATTATTTATTCTATC
CTTAAGGGTGGTCTTCAAAAAACCCTCGTATCAAAATTATTCAATGTGAT
AAAGCTAGATCTGTTTGTACAATCAATGAGCTATCATCTGATGGAGAATC
TATATTCTTCGGGATTGGTACTCCTGGAAATCTTGAATTATGGAATCGTC
GGCCATATCCAACGAGAAAATGGATAAAAAAGTCAGTGCATCCTGATGGA
GTTTATTCCTTAGAGATGAATACCAAGTACTGCTTCTCTGGAGGAGGAGA
AGATGGTATTGTTTACATCTGGAATAGAGAGTCCGGGGATTTATTACATT
CTCTTATTTCCCATGAATACATTGTTTGGAAGATACAGCTTCTACGAGAT
GGGAACTTATTCACTGCCTCTTATGATTGTTCAATCTGTGTTTATACTTC
AACTAAAAAGGATGATTGGGTGCTCAAAAAAACACTAAAAGGTCCACTTG
GGTGGGCAGACGCCCTCGAGTGCAATGGAGAAATTATGATTACACAAGAT
GAAAAAACATTTGTGCTTTCTGTATGGAATTTATGTTGGAACGAAAACGA
GGTTAGTGATAATTGTTGTGAATTACTCTTTTCCTTGGTTGGGCATGAAG
AAGAAGTTAATTGCGCGATAATACATGGTAATCAGTATATTTTAAGTGGA
AGCTCAGATAAAACACTGCGCTTATGGTCTTATGAAAGTGGTGAGTGTCT
TCATGTTCTAACTGGATTTAAGGGAAAGGTTTGGTGTGCTGACATGAACA
ATACACAAATTATAGCGGGTGGAAGATTCGGTCAAATCGGGTTTTGGAGT
CTAGAAGAGCTAAATGAAGGAAAGGGACGCATACTAGATCCTCATTCACA
CATAACTGCTGTAGGATCAATTAAACTTGAAAAACTTGGTCTTTTGTCAG
GAGACGGGGAAGGGCATATTTTTGAACTGGATTTTTGGGATACTTAATTT
GTTATGTCTTTGATTGAGATTAAATGTTGTTGGCAATTATGATTATTACT
TTGAATCGATTCAATTTAAATAATTGTGACATCAATTTNGTCTATGTTTC
ATTCATGTTTAAGCTTTTTTTTGAATAAGCTAAATAGTCCCTGCCTTGAA
AATATGTTTTTAAACTTGTCAACCATCATTTCTTCTGATAAAACAGCATC
TTTATACTCGTTTAAATCATACTTTTGGCAAATTTCTACAAGTTTTGACA
TAAGCTCCAGATCTTCGAGTCTTTTAATTTTATTAATTAAGACTGTTATG
TTAAGATGATGAGGTATCCATGGGTTCTCATATATAATTTCTTCACTTAT
TCTAGAGAATTGCGAAATGCCACTGAAAAATAGTCCTTCCCAACAACATA
TTAATAATCTAAAACGAAAAAATCTTTAAAACTGATCATTTACACATATC
AATTATCACCTAGAATCGTCGTTTGTGTTCTTAATTTGGGATCCGTATGA
CTTAATATTCAAGAAAATTTTCAAAGCATCTTCCCTTTCTTCAACACTTA
AGGAACTTGGACTTGTTAATAAGGAATCACAAAAAAAACGAACGTGTCTA
ATTATGTTGTCCGTAATTGAAGTATAGATCCGTTCGTCGTGCATTGAGTT
TTGGTTATATTCAATAAACGATATGTAATATTTTAAAATAAATATCATAT
CTTCCTTTTTGCTCTCAGAATCTATCCACTTCAATCTGGTAAAGGTAGTA
AATTGTACTGTGATAATCGATTTAAGTATATGTATACCTCATTTGGCCTA
AAATGTAGTTATTTTCAACTTCTAAGACCTTATCCTTCAAAAAGTGCTTC
GATGGGAGGAAGTCTCTCATTTGCTTGAGTAATTTGGGTTCATTTTTAAT
TGCAATTATTAATAGCAAAGTGACCTCTTTTGAAGGAAGAGCATCTGGAG
TGAATGTTTGTGTAACAATCGATTCAACAGCAGGCTGTAGATCATTATTT
TTTAATAACTCAAGAACTTGTATATCTGTAAGCTCTTGCAAGGCGTTACC
CATAAGTTGAACGGTTTCAGCGCTATCTTCAAATTCTGGAAAACTTTTTA
CAGAGGAAGACATCGCTTTGGATCGTTCTGTGGTTCTCTTTGCATCCACA
GTTTTCAAAAAATAAAATAAGAATTCAGGCGCAATTGCTTCAATATCTCT
CAACGTCTGAAGCGAATATACATTTTTTTCATTGAACAAAGCATTAAATG
AGGGTTGATTTAAATAGTTCAAAGACTCAGGTAATGAATTTGATTCCATT
AAGTACTGAAGTAATGGAATACCATATTTTTGGTGGATATCTTCTGAAAT
TAAACGATAGTACTCTGAAGCAGATTCCATCTCACCGCCATTTAAATCTT
TAATCATAACTTGAAGATTCAAAATTAGAGGAAGACCCAGTCTTAAAATG
TATTCCTTAGCTAAAGAAGGCTCTGAATCAAGAGATCGTAAAAAAATATC
AGTATTATAACTCATCATGGTTAATGCTTCAGAGAAATGACCAATATTCC
AATGACAGATGGGTTCATATTGACTTACAAGATTCTCTAATACAACTGGA
TTCTCAAATGTAACTTTAAGCTTGTCCTTAAATTCTGAAATGTTTCCAAG
AGACATCCATTTCGGAAATATTTTCAAATCAAATTGTGAATCTGTAGAAT
GATCATGATATTCTGTATCATAGAATCGACAAAAAGATGAAATTTCCTTT
TCTAAATTGGAATAAAGTTCACCACTAGGTATTTCGTTCATCCTTATTCC
TAACAAAAAAAAAAATGAAAATTAATATACCCATCAAATATTACTGATAT
TAAAAATTGTTACACACCACTTCTAAGGACTTTGAAGAAATAACAGAATT
TGAGATTGATATCTCTCGGTAACTCATGATCCAATGATCTTGAATCATTG
AGCACATTAAGTATTGAATAGAAATATTCAATTCGTTTATTGATGTGAAA
TGCATTCGTGTCGTTTTCATTCAAGGATCGATACAGCAATGAAAAAGATT
TGACGCGTATGACATCATCAGTTAAGAGAGTGCTTCTCATCCAAGTCGGA
TCTTTTGAACATTTTCCTCCTGCATAAAAGGTTATAATTGAAAAGACAAT
TAATAAATAATTAATTTATAACAGATAAGTGCCTTTGAAGGATTGAAAAT
AGTTACAAAGTTGTGAGAAGGGATCTGGGTTATTTCTCAAGTGTTGACGT
GAAGCAAGAAAGAGTGCTCTTGGCTCAATGAAGCGGTGAATGCTTCTTTC
GCTTGGTGCTGAGAGGATTTCCAATGTGTCTTGAGATACTCCCCATTTCT
GGGATAAAGTTTGAAGCGCCAAAGCGGAGATGCATCGAACATTAAGGAAA
TATCTGTGTGGAGGAGTGTTCAAGCGTAAAACAGTAGAGAGGAACATTTT
CAACTAATCCTGGAGTTACGATTCTGACTGACGATTGTACCACTCACTGT
TGCATTCTCAATATTTGAATATTCAGTCCATTGGCCATTGGAAATGTATG
CATTCCATCAACTTTCAAGGAATCTAATCAGCTGATACTATGAGGTTCTT
GACCATCACGCACATATCATATGAATTTTGGGTGTCAGAATCATTATCCC
TCATTAATATTAATTAAATTATAATAAGTCTAATTAATGCTATTACAAAA
CTTATTAAATATCGCAAGTTTTTACTGAGCAGAAAATAAGTATTACTTAA
TGATGGATTGAATATCCATTCAGTTACAAAGGCAACAATACGCATAATTA
ATAACAAATGCATCAATTTGAGCATAATTTTAATTTGTAATTTTTAAAAG
GAAGATATTCTCAAATTTAGTATTAAAATACGTATAATATATTAATTATT
ATTATTAATAGCAATTAAAC back to top
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