EMLSAT00000007282, EMLSAT00000007282-703129 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007282
Unique NameEMLSAT00000007282-703129
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s409supercontigLSalAtl2s409:129273..131364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007282 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007282EMLSAG00000007282-690048Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031967EMLSAE00000031967-740895Lepeophtheirus salmonisexon
EMLSAE00000031968EMLSAE00000031968-740896Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772865auto772865Lepeophtheirus salmonispolypeptide
EMLSAP00000007282EMLSAP00000007282Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007282

>EMLSAP00000007282 ID=EMLSAP00000007282|Name=EMLSAP00000007282|organism=Lepeophtheirus salmonis|type=polypeptide|length=679bp
MEKNGEDSDRMVFRPLGAGQEVGRSCHLLEFKDKRILLDCGIHPGLSGMD
ALPFVDLIEADEIDLLLVSHFHLDHAGALPWFLEKTTFKGKVFMTHATKA
IYRWLLSDYIKVSNISTEQMLYSEQDLEASMEKIQTLNFHEEKEVKGIRF
WAYNAGHVLGAXMFMIEIAGVRTLYTGDFSREEDRHLMAXEXPSLKPHVL
ILESTYGTNIHEKREDRESRFTSTVHDIVTRGGRCLIPVFALGRAQELLL
ILDEYWGAHPELHEIPIYYASSLAKKCMAVYQTFVNAMNERIRRQISVNN
PFVFKHISNLKGIDHFDDVGPCVILASPGMMQSGLSRELFESWCSDPKNG
CIVAGYCVEGTLAKHILSEPEEVASMNGQKLPLKMQVNYISFSAHTDYKQ
TSGFIRELKPPHVILVHGEANEMSRLKSALIREYEADPSTKIDFYNPRNT
VSVDLFFRGEKMAKVMGSLAVDPPIQEHRVSGILVKRNFNYHILSPSDLP
KYTDMTTSVVTQRQSIYYSGSFQLLQFMISQFGCDVTTPKEKEKKKKYIR
VFDSIDVIHEDKMITLEWIASPVNDMYADAVLSAILQAESLDTPQYIPAN
ARVDKMHFKECCIELLQDMFGEESVPKTFSGDKFGVIVHNKKALIDLKTL
EVSCNEDETFGKIVETAITKLHESLVPLD
back to top

mRNA from alignment at LSalAtl2s409:129273..131364-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007282-703129 ID=EMLSAT00000007282-703129|Name=EMLSAT00000007282|organism=Lepeophtheirus salmonis|type=mRNA|length=2092bp|location=Sequence derived from alignment at LSalAtl2s409:129273..131364- (Lepeophtheirus salmonis)
ATGGAGAAGAATGGCGAGGATTCAGATAGGATGGTTTTTCGTCCTCTTGG GGCAGGCCAAGAAGTCGGACGATCATGTCATTTATTAGAATTCAAAGATA AGCGAATTTTGTTGGATTGCGGTATCCATCCAGGATTATCTGGGATGGAT GCTCTTCCATTCGTGGATCTGATTGAGGCGGATGAAATTGATTTACTCTT GGTGAGTCATTTTCATTTGGATCATGCGGGTGCACTCCCATGGTTTTTGG AAAAGACAACGTTTAAAGGAAAAGTGTTCATGACTCATGCAACGAAAGCC ATTTATCGATGGCTCCTCTCGGACTACATTAAAGTGTCCAATATTTCCAC GGAACAGATGCTCTATTCAGAACAAGATTTAGAAGCCTCTATGGAAAAAA TACAAACCCTCAATTTTCATGAAGAAAAAGAGGTGAAGGGGATCCGTTTT TGGGCTTATAATGCTGGTCATGTTTTAGGGGCTGSTATGTTCATGATTGA AATTGCAGGTGTGCGCACTCTTTACACTGGAGATTTCTCTCGTGAAGAGG ATCGGCATCTTATGGCTGSAGAAGMTCCTTCACTGAAGCCTCATGTCCTT ATTTTGGAGTCCACATACGGTACAAATATTCATGAAAAGAGAGAAGATCG TGAATCTCGCTTCACATCCACTGTACATGATATAGTTACCCGAGGAGGAC GTTGTCTCATCCCTGTATTTGCTCTTGGTCGAGCTCAGGAACTCCTTTTG ATTTTAGATGAGTATTGGGGTGCACATCCTGAGCTACATGAAATCCCAAT TTATTATGCCTCATCTCTCGCAAAAAAGTGTATGGCGGTGTATCAAACAT TTGTAAATGCCATGAATGAACGCATTAGGAGACAAATTTCCGTGAATAAT CCCTTTGTTTTTAAGCATATCTCTAATTTAAAAGGCATTGATCACTTTGA CGATGTAGGGCCATGCGTTATTCTTGCATCTCCGGGCATGATGCAAAGTG GTCTTAGTAGAGAACTTTTTGAGTCCTGGTGTTCAGATCCCAAAAATGGA TGTATTGTTGCTGGTTATTGTGTCGAAGGTACACTTGCTAAGCACATTCT CTCTGAGCCTGAAGAGGTGGCTTCTATGAATGGACAAAAATTACCTCTTA AGATGCAGGTCAATTATATCTCCTTTTCAGCTCACACTGATTATAAACAA ACATCTGGGTTCATACGAGAGCTAAAACCTCCGCATGTCATTCTTGTCCA TGGAGAGGCAAATGAAATGTCAAGACTCAAATCCGCTCTAATTCGTGAAT ATGAAGCAGATCCATCAACGAAAATTGATTTTTACAATCCAAGAAATACA GTGTCAGTGGATTTGTTTTTCCGTGGTGAGAAGATGGCTAAAGTTATGGG ATCTCTCGCTGTTGATCCACCTATTCAAGAGCACAGAGTATCTGGTATAC TCGTCAAAAGGAACTTTAATTATCATATTCTATCTCCTTCTGACTTACCC AAATATACTGATATGACAACATCGGTCGTAACGCAAAGACAAAGTATCTA TTACTCTGGATCCTTCCAATTACTTCAATTTATGATTTCACAATTTGGTT GTGATGTAACAACTCCAAAGGAAAAAGAAAAGAAAAAGAAATACATTCGA GTATTCGATTCCATTGATGTCATTCATGAAGACAAAATGATTACGCTTGA ATGGATAGCGTCTCCGGTGAACGATATGTATGCTGATGCTGTTCTGAGTG CCATTTTGCAGGCAGAATCTTTAGATACTCCTCAGTACATTCCAGCTAAT GCTAGAGTCGACAAAATGCATTTTAAAGTAGGTTTTTCAAAGCAGTTTTA CTTTTTACTAATATAGTTGTCTTTTTTAGGAATGCTGTATAGAACTACTC CAAGACATGTTCGGGGAAGAGTCCGTACCAAAGACTTTTAGTGGAGATAA ATTTGGAGTCATTGTTCATAACAAAAAGGCTTTAATAGATTTAAAAACCT TGGAAGTTTCTTGCAATGAGGATGAAACCTTTGGAAAAATAGTAGAAACT GCTATTACAAAACTACATGAATCCCTTGTTCCTTTGGATTAA
back to top
Add to Basket