EMLSAT00000007297, EMLSAT00000007297-703144 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007297
Unique NameEMLSAT00000007297-703144
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4109supercontigLSalAtl2s4109:944..7110 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007297 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007297EMLSAG00000007297-690063Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032044EMLSAE00000032044-740972Lepeophtheirus salmonisexon
EMLSAE00000032045EMLSAE00000032045-740973Lepeophtheirus salmonisexon
EMLSAE00000032046EMLSAE00000032046-740974Lepeophtheirus salmonisexon
EMLSAE00000032047EMLSAE00000032047-740975Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768133auto768133Lepeophtheirus salmonispolypeptide
EMLSAP00000007297EMLSAP00000007297Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007297

>EMLSAP00000007297 ID=EMLSAP00000007297|Name=EMLSAP00000007297|organism=Lepeophtheirus salmonis|type=polypeptide|length=459bp
MQIGNLLTGWDSEEGVSVEEDRWREVGVNFVGNVDXXXXXXARNSECLSC
KRKGHFTRMCKSAKQNSVTILMEIIKWKLQTRVIVEQWFLLLYLKYLKKI
KFDRKGSTFDPKIVGVNGSSMHILGVVQLIMKLGSRSYRETVYVVGNITE
NELFIFQNARIHFGVLHPDFPQQLKKEWIDQPLGIESVRTIMHSKIKEVE
NQLLEEFSILSENAKPFARHSARQIPFCYRGQVKNMLDDRVKKDVIVKVE
DETTEWCHAIVIVSKQNVKLPSFTTLRPTGXFLRIXXQFELAKITQERTK
FNYLLSAIPEDLLYKVLYYSLNKCLKSEQPYSDLKVLLTRVCVGSMQTLT
NDFVNLISNRDNISVCEMQSKAWDLINEISKDRTDLKEALVKDMVLNCIP
ISSCQHLTQGFRGLSYEKFIRCARTEENVRTLKLTCYIEKERDEVKGINI
IRRNAEPNT
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mRNA from alignment at LSalAtl2s4109:944..7110-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007297-703144 ID=EMLSAT00000007297-703144|Name=EMLSAT00000007297|organism=Lepeophtheirus salmonis|type=mRNA|length=6167bp|location=Sequence derived from alignment at LSalAtl2s4109:944..7110- (Lepeophtheirus salmonis)
ATGCAAATAGGAAATCTGTTGACAGGATGGGATTCCGAAGAAGGAGTGTC
AGTCGAGGAAGATCGTTGGAGAGAAGTGGGAGTAAACTTTGTGGGAAATG
TAGATTNNNNNNNNNNNNNNNNAGCGAGGAATAGTGAATGCCTGAGCTGT
AAAAGAAAGGGACATTTTACAAGAATGTGTAAATCAGCGAAGCAGAACTC
CGTCACGGTAATTATTTCTATCCAGAAATTAAAAACTAATAAAATACCAA
TTGAAATAATAGATACTTATGGAAATCATTAAGTGGAAGTTGCAGACACG
TGTGATAGTGGAGCAATGGTTTCTATTGTTGTATCTAAAGTATTTAAAAA
AAATCAAATTTGATCGCAAAGGGTCTACTTTTGATCCAAAGATTGTTGGA
GTGAATGGATCTTCAATGCATATTCTTGGTGTTGTACAACTTATCATGAA
ACTTGGAAGTCGTAGCTATAGGGAGACTGTGTATGTTGTAGGGAATATCA
CAGAGAACGAACTTTTCATCTTTCAGAATGCACGTATTCATTTTGGTGTT
CTCCATCCTGATTTCCCACAACAACTAAAAAAAGAATGGATTGATCAACC
ATTAGGCATCGAGAGTGTGAGAACAATAATGCACAGTAAAATTAAAGAAG
TGGAAAATCAGTTATTAGAGGAATTTTCAAGTGTATTCTCATGTGAACAA
AAATTAAAATAAATRAATTTCCCACCAATGAAAATAGTACTATCGGAAAA
TGCGAAGCCATTTGCACGGCATAGTGCAAGACAAATACCTTTTTGCTATC
GTGGACAGGTGAAAAACATGCTGGATGATAGGGTCAAAAAGGATGTGATT
GTGAAAGTAGAAGATGAAACAACAGAGTGGTGCCACGCCATAGTTATTGT
ATCTAAACAGAATGGTAAAGTGATTTAAACAGTAGACTTAACCATGTTAA
ACTCACAGGTTAAGAGATTAGTTTATCCTATGGAAACTCCAAAGGAAGCT
GTTTCGGAAATCAATCCGAAGTCCCAGTTTTTCACAAAATTTGACACTGT
GCATGGTTAATGGCAGATGCCCCTAGAAGAGGGACAGAAATTAACAACTT
TTATTGCTCCATACGGAAGATATTACTTTAAGAGAGCTCCTATGGGMTTT
ATTTATACGGGAGATGCGTATAATAGTCGGTGTGATATAGTAGTTGATGA
CATCCACGTTGACGACGAAGATCTTGAGAATCATATTAAGAGAGTAAGAA
GAGTTCTAAACAGATGCAAGGAATTTGGAATCACATTAAGTCTAGAGAAA
TTTCAATTCGCGAAAGAATAAATTGATTTTGTCGGTTACAAAATCAATAA
GAATAGAATTGCCGTCAACGAAGTTAAAATAAATGCTATTCACAAATTTC
CCACTACTACGAACAGAACAGAATTAAGATCATTTATGGGTATGGCTAAT
CAATTAACATCTTTTACCTCAAAATTGAGCAAAGTGGCCGAACCATTGAG
ATAATTGTTGAAGACGAAGAATGAATTTAAATGGGAGTTAGTTCCCTCAC
ATGCAATTGACAATATTAAAGATATCTTACTTAAGCCACCAACTCTAGCA
CTTTTTGATCCCTTGAGAGAAACATGTTTAGAGACAGACGCATCAAGAAC
CAAAGGTCTTGGATTCAATTTAATACAACGGTATGGAGAAAGATGAGAAC
TAATTGAATGTGGTTCGAGATTTATCATTGAAACCGAATCAAGNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAGATAGTTTAAAATCTG
ATGACATACCACAACTTATATTTGAATCCATGTCAATAGATTTGTTTATG
TTAAGCGGAAAATCTTACCTGGTATGTGTGGATGCATTATCAGTATACAC
GGTGATTGAAGAATATAAAAAAGACCCAAATACGGAGAAAATTATTGAGA
CATTTTCAAAATGGTTTACTAATTTCGGATATCCGAAGAATCTGAGATCT
GATCAAGGTGCAGTCTTCTCATCCCATATATTCCAAGAATTTTTACACTA
AAAAAATGGCATCGTTTGGTCTCCATCAAGTCCTTACAATCCACAAAGTA
ACAGAATGGCCGAGGCAGCTATAAAAAATATGAAGAACCTTCTTAATTAA
TGTGGAACAAGAACAATCGATTCAGAAGAGTTTAGAGATGGGCTATTGGA
GTATAGAAATACACTCCGCAAGTGCGGATACTCTCCTAATCAAGTAGTTC
ATGGAAAGAACCTTAGATCAAAAATTCCAGCACACAGTAGTGCATTGAAG
AAATCGTTTCATAACATTTGCAACAAATCAAAATTATATTACGACACCGG
TACTAAGGAATTATGTACGTCGGATATTCGTAGTTCGAGTAGGACGCAAT
TTCCCCCGTGGAGACCACTTTGTAGTAGCGTTAACTACAAAACAAATCTC
AATGCCATTTTAAAAATGAGAAGGAGGCCTCTTTGTATCAAGAAATAAAT
AGAACCTGTACGAAGAACCTTTTGTAACGAATTGATGAATCAGATGCTTA
TAAGAGTGAACCTCAAGGACATCCACTTATATGATATATCTTGTATTATA
TATTTGTTTTTTATTCAAAATATACTATATAAATGAGTATATTTCGCTAT
GTATTAATATTATTATATCAGCTACTGTACACGCTACAAGCTACGTTAAT
AAACCTTAAAAACTCTTCTCTGTGTATATCTTAATGCTAATCACCCAGGA
TAAATAAGGTTAGTCTTCAACTTGAACTAAACGCTCTGTCCAATCATTCT
ACTTAAAACATACAATTATTATCTTTTAAATAAGGGAGATTGTTCATTAT
GTAAGTCAAATTCCTTGGACCCTGCAAACGTATTTAAAACGTGTTTGTAC
TAATAATGGTATGGATTTTTAACAACTGCAAAAGTAGTTAAAAGGCCTTA
ATTATATTATAATCCATACCATACCCCCCATACTATACAATATATGTATT
TTATATTAATATCAATAAGGGGATTTTCTGGTGTTTATAATCTGTTCTTC
TTTTCTTTTTTGTATATCTCTTGTTATTGTATTTTAAGAATTAGGAATAA
ATTAGCACTCAGCATGTACACAAGTGAGTTTCTTTTGAAGAGTCTAAGGA
CACTACAATGGTGACCCGACTAAACGAATTATGACGGTGGATAGTATTGG
TTAATACTGTAAAGTGACTTAATATAGATTGAATCGCCATAGCTCATGGA
CAKCACTCTCGGGAGTTCTCTCTTGAACTTGATGTTTGTACGTTCGCGCC
CCAGCGATTCCTGGATAAATAAATAAAATATATGTACATAGATTTCACCA
AAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGTAATTATAACACTGTA
ATTTTTACTTTAACTTAATCAGTGCAAGTCCATCTAACCAATTAAAGGAA
TATTKAAAAAAAAAAWWACTAAYCWAAGTRACGTTTCAGTGAAACTTCCA
TCTTTTACCACCTTAAGGCCTACAGGATAKTTCCTTCGTATTMAAWKTCA
ATTTGAGCTGGCTAAAATAACTCAGGAAAGGACGAAATTTAATTATCTTT
TGAGTGCAATTCCGGAGGACTTATTGTACAAAGTCCTGTATTATTCTTTA
AACAAGTGCCTGAAGTCAGAACAGCCTTACTCGGACTTAAAAGTACTTTT
AACAAGAGTTTGTGTAGGTTCAATGCAAACACTTACCAATGACTTTGTGA
ACCTCATTTCAAACAGGGACAACATCTCTGTTTGTGAAATGCAATCAAAG
GCATGGGACCTTATTAATGAAATATCCAAGGACAGGACGGATTTGAAGGA
GGCCCTTGTAAAAGATATGGTTTTGAATTGTATTCCAATATCATCGTGTC
AACACCTCACACAAGGTTTTCGTGGATTATCCTATGAGAAATTCATAAGG
TGTGCAAGAACTGAGGAAAATGTAAGAACTCTAAAACTTACATGTTATAT
AGAAAAGGAGCGTGATGAGGTTAAAGGAATAAATATTATCAGAAGAAATG
CTGAACCTAATACCTAA
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