EMLSAT00000007299, EMLSAT00000007299-703146 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007299
Unique NameEMLSAT00000007299-703146
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s410supercontigLSalAtl2s410:153853..156558 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007299 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007299EMLSAG00000007299-690065Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032051EMLSAE00000032051-740979Lepeophtheirus salmonisexon
EMLSAE00000032052EMLSAE00000032052-740980Lepeophtheirus salmonisexon
EMLSAE00000032053EMLSAE00000032053-740981Lepeophtheirus salmonisexon
EMLSAE00000032054EMLSAE00000032054-740982Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773402auto773402Lepeophtheirus salmonispolypeptide
EMLSAP00000007299EMLSAP00000007299Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007299

>EMLSAP00000007299 ID=EMLSAP00000007299|Name=EMLSAP00000007299|organism=Lepeophtheirus salmonis|type=polypeptide|length=239bp
MYIMTYTMWYRFFATAAIPFGLTLFFNTQVLIYCRKNNLQTQSNHERSLL
IIFACITITFLVCHIPRVILNIYEFTLQRRETICHKKYMSKFNPPVIILL
ATSVEKILLILNSSANFVYYCFSGNRFRNQFCQIVKCTYMNKAIIVSQSD
KNXKKLQNTSSSLRLSNKQRHSTRNHYQYNDDMDRIKRFTLSREDISGST
RDDTVHTEVAHVNGQNLDIALKEEQLKIFLGQHYDEILI
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mRNA from alignment at LSalAtl2s410:153853..156558+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007299-703146 ID=EMLSAT00000007299-703146|Name=EMLSAT00000007299|organism=Lepeophtheirus salmonis|type=mRNA|length=2706bp|location=Sequence derived from alignment at LSalAtl2s410:153853..156558+ (Lepeophtheirus salmonis)
TATAGATTGAAATAACAGAGCATGGACAAAGTTTTAAATACTCTGCGCTA
CGTACAAATCCAATGTATATAATGACTTACACCATGTGGTATCGCTTTTT
TGCTACTGCAGCCATTCCCTTTGGACTAACTCTCTTCTTTAATACTCAAG
TACTCATCTACTGTCGGAAGAACAAGTAAGTGTAAACAGGGAATATTCTA
TTCATGAAATTTTCCTCTTATTCATAGATTTTTACCAACAGGGGCGATTT
AAAAAAAAGAATAGTAATAAAATAAAATTTGGAATAGAATTAAAACAATC
TTTTAGTTAATACCTAAAGGGGTTTAAATTTTTTTTATATACTTATCCAT
AAATTCTTTATTAAAATAATAAGAATCTATATGAATGTTACAAAGTTTGT
CTGGATGTAGATGAAGGACTTATTTTTGAGTGTGCACATAACATATTAAA
ATTGTATGACTACTTGATCTAGGAAAAATGACAATATAACAACGAGGATT
GTTAAACAAAGCTCATTGCATCATATTTAATCAAGCAAAGTTGCTCTATT
TGGCGATCGTCCCTTTTTGAGTGTTCATTTAATATATTATTACAACATTA
CTACAGTAAATAAGATATAACAATGTAGCAACTAGCGTTTCCAAAAGCTC
AGCACGTCATATAAAAGAAAGAAAGATGCAGTSAATATCTTAGGTATTAT
TAGAGCAAATAATGTCTACGCATCGACGCTGCCTATTAACTATGAGCAAT
GTCGAGTACACTCACTAGTGTTAAAATAAAGTTTTTTCAAAATTCTTTAG
GATATTTATTAAACGATTGTTTTAATCCATAGTTGGGGAACTCCGATGTT
CGGTATCTCCAATTTTATAAAATTACTCCAAATCTTTTAAATATTTTTTT
AAAATGGTTATTTTTATTATACTCCTGAAACATACCCTGGAATGGCTCAA
ACCACCTTTTGTTGCTATGAAAATGTATTTTCTTGCCATTATTCCCAAAT
TTGGAAATTTTAAACTAGGTTAAGTGAATTTAGTTTGCTTCTCTGATTTT
AAGTCGTTCTTTGCTTTTCCTTTATTTCAATTTAAGGTATACGTATTGCC
ACAAATTATATTTTTTTCATGCTCTAATTTAATGTTTTTAAGAATAAGTC
GTAGTCTTAAACGACCCATGGTATCGTCGTTGTTTTTTTTTACCTCCTTG
GTGGCAAAGAACTAGTTTTAGGTTGAAGTCTTCGGATTTTGATAATAAAT
GACTTGAAATTTTCCCTATGGCAATTTTTTCCAAGGCAATTTTCAAAAAA
AAAAATCTTCAGGGCAATTTTCCTAGAACCAATTCTGTATATATCAATCC
ATAACTATTCTATAGTAGCTAGGGGAAATTAGGCTTTAGTTGTTAAAAAA
AAAGCATGTAAAAAGTGATATTTCCATTTATAAAGTATTCCTGAGTGTAT
TCAAAGCCATTTATAATTGACCATTAATGAATGTTTCCCCCTTTTTTTAC
AGCCTACAAACACAGTCAAATCACGAACGGAGCCTTTTGATTATTTTCGC
CTGTATCACGATCACTTTTCTCGTCTGCCATATCCCACGTGTCATTCTAA
ACATCTATGAATTCACACTTCAAAGGAGAGAAACGATTTGTCACAAAAAG
TACATGTCCAAATTCAATCCACCAGTCATTATTCTCCTTGCTACATCTGT
TGAAAAAATCCTTCTTATTCTCAACTCCTCGGCCAATTTTGTTTACTATT
GCTTCTCGGGGAATCGATTTCGAAATCAGTTTTGTCAAATAGTCAAGTAA
AGATTTTGTTTCTAGTACAAAATTTATTCAGAAAAAATAAACTTTTTTGC
AGATGTACTTATATGAATAAAGCCATCATAGTATCCCAATCAGACAAGAA
TMGTAAAAAATTACAAAATACGTCATCCTCTCTACGTTTATCAAACAAAC
AACGTCACTCCACAAGGAATCATTACCAATACAACGACGACATGGATCGG
ATTAAACGATTCACTCTATCTCGAGAAGATATATCGGGTTCTACAAGAGA
TGATACTGTCCACACAGAGGTTGCCCATGTAAATGGTCAAAATTTGGACA
TTGCTCTAAAGGAGGAGCAACTCAAGATTTTCCTGGGTCAACACTATGAC
GAAATTTTAATATAATCTACAAAGTATAGTTCTTCAGCTGTATGATCTAC
TTTTTCATCACCCTGCTTATTGGGAATACTAATGTTGGGACTCTCCTTAT
TTAGGAATGAAGACTGAAGTACGTCCACTGAAGTCTCAGACCGTTCCAAT
GCAGTCCTGCAAATTTGTGTTGTGTCTGTCTTAATTATTCGGTTCATTCC
AGTCTTTGAATCGGGTCTATCAGTTCTCGGGACCGGTTCTTTAGTTTGTC
GGTCACCCAGACTGTTAGTACTAATAGAATTAAATAAAAGAAGAAGAAAT
AATTTTAACTTTATTAGTTTTTAGGACTGATATGTAGGCCTGAACTGGAC
GGGACTGCAGTCTTTAGTCCTAAACAAGGAATGAAACAACATTTTTGTAT
ATCAGTCTTAAAACTTAAAACAATATATCATTGATGACGTCACTCAACTT
TCTTTCTCCATTTTTAATCAATTTTAGTGCTGACAGTATAGAGGATCGGT
CCTAAGACAGGACTGGACCGAATACATAAGGACTGATACAACACAAGGGT
ATGCTG
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