EMLSAT00000007360, EMLSAT00000007360-703207 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007360
Unique Name	EMLSAT00000007360-703207
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s418	supercontig	LSalAtl2s418:358465..364023 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007360 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007360	EMLSAG00000007360-690126	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000032306	EMLSAE00000032306-741234	Lepeophtheirus salmonis	exon
EMLSAE00000032307	EMLSAE00000032307-741235	Lepeophtheirus salmonis	exon
EMLSAE00000032308	EMLSAE00000032308-741236	Lepeophtheirus salmonis	exon
EMLSAE00000032309	EMLSAE00000032309-741237	Lepeophtheirus salmonis	exon
EMLSAE00000032310	EMLSAE00000032310-741238	Lepeophtheirus salmonis	exon
EMLSAE00000032311	EMLSAE00000032311-741239	Lepeophtheirus salmonis	exon
EMLSAE00000032312	EMLSAE00000032312-741240	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776837	auto776837	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007360	EMLSAP00000007360	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s418:358465..364023-

protein sequence of EMLSAP00000007360

>EMLSAP00000007360 ID=EMLSAP00000007360|Name=EMLSAP00000007360|organism=Lepeophtheirus salmonis|type=polypeptide|length=537bp
MTDNIEKAKSLQIQVIPPESLDKAMKIDPETLIKQHSICEWGSEPSSRIP
HLKKVSSSGSSNTTSKSVKLTLKGGGCVDPDSGLDNKCHVFKKGDTLYSS
VLGAVSVQDGKNSYYKLQILKHDKKNHRYYLFRSWGRVGTTIGGKKTEDF
DSSSDAIREFERLYEEKTGNLWRHRNKFEKLPGKFYPLDIDFGSSQSDAE
SKKLVLSESKSKLALPIKELISLIFDVESMKKALVEFEIDLNKMPLGKLS
RKQIEKAYSILNEAQNLLDSKTQSQSKVIDATNRFFTLIPHDFGMNSPPL
LEDLELIKNKIEMLDNLLEIEVAYSLLQSDSSSQENGDIDPFDSYYKKLN
TELEVVDNSSEEYQILEKYVQNTHAATHDMYSLEIESILKVNRKGENKKF
KPFRKLPNRPPVTGYMFGKGIYFADMVSKSANYCHTSKKKNTGLLMLCDV
ALGNIYEKTSAEYVEKLPPGKHSTMGIGKTQPDPNDVTEIDGSTIQYGKS
VKDDNLKSDLLYNEFIVYDVAQVQCKYLFRLKFNYKI

mRNA from alignment at LSalAtl2s418:358465..364023-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007360-703207 ID=EMLSAT00000007360-703207|Name=EMLSAT00000007360|organism=Lepeophtheirus salmonis|type=mRNA|length=5559bp|location=Sequence derived from alignment at LSalAtl2s418:358465..364023- (Lepeophtheirus salmonis)
GCTCTGTAGGAAAAATGACTGATAACATTGAAAAAGCAAAATCCCTTCAA
ATCCAAGTAATTCCACCTGAGTCATTGGACAAGGCGATGAAAATAGATCC
TGAGACTTTAATAAAGCAACACTCAATTTGTGAATGGGGTTCTGAGGTAC
TCTTTAAAATTAATGAATTCTTAGTTAATTATTATGTTATGATTTCCCTA
TATATTTATCAGCCTTCTAGTCGGATACCTCACTTGAAGAAAGTTTCCTC
ATCGGGTTCTTCCAATAGTGGATCAAAAGCAAATTGTAAATATCTTGTTT
AATAATAGTTTAAGCATATTTTAAATTGTATTTTTAATGAATAGCAACTT
CCAAGAGTGTGAAATTAACGCTAAAAGGAGGTGGTTGTGTTGATCCGGAT
TCGGGCCTAGATAATAAGTGTCATGTATTCAAAAAAGGGGATACTTTATA
CTCATCAGTATTAGGAGCAGTCAGTGTTCAAGATGGAAAAAACTCATATT
ATAAGCTTCAAATTTTGAAGCATGACAAAAAGAATCATCGGTTTGGACTA
AATATTCTCATTTAACTGCTCACTCAAGTCCATAAAAAAGAAATCATTTT
TACTTGAAGGTATTACTTATTCCGATCATGGGGACGTGTTGGAACTACAA
TAGGTGGAAAGAAAACAGAGGACTTTGATTCAAGTTCTGATGCAATTCGA
GAATTTGAGAGATTATATGAAGAAAAAACAGGGAATCTCTGGCGCCATAG
GAATAAGTTTGAGAAATTGCCCGGCAAGTTCTATCCTTTGGATATTGACT
TTGGATCCAGTCAATCGGATGCGGAATCAAAGAAATTAGTACTTTCCGAG
TCTAAATCCAAACTTGCTCTTCCCATCAAGGAGCTCATTTCTTTGATTTT
TGACGTTGAGAGCATGAAAAAGGCACTTGTTGAATTTGAGATTGATTTGA
ATAAAATGCCTCTAGGGAAATTGAGTCGAAAACAAATTGAAAAAGCTTAT
TCCATTTTAAATGAAGCTCAAAATCTTTTAGATTCTAAGACCCAGTCACA
ATCCAAGGTGATTGATGCGACCAATAGGTTCTTTACTCTCATTCCTCATG
ACTTTGGTATGAACTCTCCACCACTTCTAGAGGATTTAGAACTCATAAAA
GTAAGTTGGAGTTTTTTTGTTAATTGAAAAAAAAATTCATTGACAAAATC
ATATTCATTAATTATTTATTTCAATGTCTAGAATAAAATCGAAATGTTGG
ACAACTTATTGGAGATCGAGGTAGCATATAGCTTACTCCAAAGTGACTCA
TCTTCTCAAGAGAATGGAGATATTGATCCGTTTGATTCTTATTATAAGAA
GTTGAATACTGAGCTTGAAGTAGTGGACAATTCTTCGGAAGAATATCAAA
TCCTTGAAAAATATGTGCAAAATACACATGCAGCTACTCATGATATGTAC
TCTTTAGAAATAGAAAGTGTAAGTATTCCTTAGGCATGTTTTGTGACAGA
ATAAAGGTTGATCCATTGGGCCAGGGGTCGGCATCCTATGGCACGCACAA
ATTAGAGCCTATTCCGCAGTTTGTGTGTTTTTTACCATTATTGTTGATAG
TGACACTCCATGTCTCAAAGGTTGCCTACCCCTGCATTAGGCCATTAGGG
TGTCCCGAGGCAAATAAAGCAATAGTCTCCTTCAAAATCTGACATACTTT
TTTAAAATGTTATCTAAGCTACACACATATAAAAAAATATTTATCCATAA
CAACGATAACTTGTGCCAATTTGAGCTTAAACGTTAATTATGACTTGAGC
GTTAGGGGGAAAGGGACATTTCAAACTCAAATGATGTGGTTTACATAAAA
ATTAATTGCTTACATAAGTGTATTTTAATTTGTTAGAATTTTAGTAAATA
GTTTTCTAATTCTTTTTTTTTTTTTAATATAAATTTGTATTTAGCCTTAA
TATATAAATAAATGAGCTTTATAAGTCGTTATTGTTTATTTTTGGTTAAA
ATGGATGTTTCTTTCAAATTTTTAATCAAAATCCCTCAACTTATGATTTT
TCGTCGTTTCTAATATGAATAATCCCCCTCATTTCTAATGATAATTATTA
ACGGAGAAGTGATTAACAATTCTTCTATTCAAATCCTTGCCGTGTTAATA
TATTTTTGTTTTTCTTACTATACTAATTTTATCACCTATTTAATCTCTGG
TTCGAATTCATTTCATGGTGAGATTTTGTCGTATGCATTGAAATTTTGGG
GCAGGATTCTATCATTTTACCAAGAGAAAACACCCTTTTAATGCGTTTTA
TAGTAATGCACATTACATATTTTGATTTAAAAATATCCAAAGGAACATTA
ATTTTAACCAAAAATAAGAAAAACGACGTATAAATCTTATTTATTTATAT
ATTAAGGCAAAATAGCTTGAATGCAAAATTACCTAGCGCTCCTATTGGTA
TTGAGTCTAACTCTTCAAAACCTTACTTTACTTTAAACTCACTGTTTACA
ATGTATAAAGGACAATTAGAACAAGAAATGCCGATACTTTCTTATTGTCC
TCATGTTTATGTCAAGTTCCTTAAGATAAACTAGTGTTTAAAGTTGTGTT
AATTGTATGTTATTATCTTGTAGTCTCTAGTCTTAAAACTCCATAAATAT
TTGTTTAATTGATTTTAATTCCCGTTTTCAAAGTCAAAAGAAGGATTTAT
CGATAAATGGTTAAACATTTCACTCTTAAGTTACAATTTTTAGTCAAGAT
TGGTATTGAAAAAATAATTTAAGATCGAACCGAAAATCAAATTCGCTCTT
GGAGAGTGTGTCAACACTAATAACAATGTCTTTGTACTTAATTTTTTTTT
TTGACACTCCTAATGTCTTCATACTGCATTAAATTTCTTACAGCTTTTAT
TATTTTACATTGGAATAAGAAGGCGAATAAATAATTATTTCAAGCTTTGT
GACTAATATGAAATGCATTTTCAAATWTTTTTTCTCCAGCTTCAWAAAWA
GGMGCGATCACCCCCCCCCCCCCCATGTACTATAATTATAGGTATCAATT
ATTTTTCTCCTAACAATTTTCCATATTTGTTTCCTGACACTCATTCAAAT
CCNATATTTCACCAACAATACATTWTAKGYAYTTATAATCATAATTTAAC
TCATGTTTGACTTGTGTTATTTATTCTTATGTTGTTGTTTTTTTAGATTT
TGAAAGTCAACAGAAAAGGTGAAAACAAGAAATTCAAACCATTCCGAAAA
TTGCCTAATCGGCGTTTATTATGGCACGGATCTCGAATGACCAATTTCGT
GGGGATTTTGTCTCAGGTAATAATAAGTCTTATAATCAGTGATAATTAGT
CTTCTGTCGGTCCCAAATAAGAATTGAAGACTGCAGTCGTGTTTATTTTC
GGTGCAGTCCAGTTCAATCTTAAAACTTATAAAGTTCCGTCTTTTATTAC
ATCCCTTTGCCTTTGTTTCTTCTTTTTTTAATCAGTTCTAGTACTGACTG
CACCGAATAAAGAAGGACGGACAAAAAAAACTCTGTTAGTAATTATGCTT
TCACTGTTATGAAGATTATATTGGGTGCCAAGTTACAAAAATATAAAGAT
AAGGTGAAATTTTGTTTTAAACAAAATTTGATTTATTGTCAAAAAAGAAA
ATATTCTCTGAAGATCCGAAATTCAAAAATAAGAAATGCCTATCTTTGAA
GTATTAATATACTTCTAAAAATTGTTAGTTAAAGGGCGGTAAAATTTACT
CATGACCTCCATTGTGCCACACGGCATCTGCTTCTATCTACATGCCTAAA
AAGCTACTGAATAAAATACTGGGGGGAAAATCCAATTTTTTTAAAACCTC
ATTTAAACAAACAGTCTTTGAACATACTTTGGTTAATTATGGCCTTTGTA
TTCAAATTTCTTGGGACGACTAGAGATATTTAAGAATTTAACAATCAGGG
ATGTCCACAGGATTATATATTAATACAAGTTGCGATGTCTGTACAAGTTG
CAAATTGTATAAACAAATTGTACAAGTTGCAATTTCTTCGTCTTAAAATT
CATTATTAAATTGCAATATTGAGCATTCTAATTACCAACTGTACATTGAT
ACTATTTTATTATTTTGATCTATTAAATTTACAGGGTTACTATGTATTTT
TCAGTAATGTAAATGTGGGCATTTGAACTTTATAATGTGACTTATAATAC
TTATATTTAAGTAATTTGTAATGATATAGTCAAAAACTACACTATTGATA
CATGGATCATGAAATTCCCAAGTATTGTAAATCCTTCATCTAAAATTATT
CATTTCATTTTTGGTTGCAACTTGTACGAAATCGTAACTTGTACACAACA
ATATATATATTTTTTTGGAGGGAGGGGGGGGGAGTCTTGGTTTTTGTATT
ATTTTTGGGAAAAAAATAAATCATAAACCCACAGTTAGCTTCAAAAAATT
TCAAATATTGAATTTTTTCGAAAAAAATTTCAAAAATCCGTAGCTATTCA
CAAAAAATTAAATTTTAGGGGGGAAAAAGTCAAAAATCAAGATCTACTAT
AAAAAAGCTAAAAATTTTGTGAAAAAAATGATAAATCTACAGTTACCTTC
AAAAAATTTCAAATATTAAATTTTTCCGAATTTTTTTGAAAAAATCCACA
GCTATTCAGAAATAACTAATTTTTTTGAAAAAAAATTAAAAATTCAGATC
TATTATCAAAAAATTATTTTTTTTGGAAAAAAAGTTTGTTACAAAAAATA
TTAAATTTTTTGGAGTGAAATGTCAAAAATCACTAGGAATTCATAGAAAA
TTAATTTTTTTGGGAAATTAATGCAAATATTAAATTTTCTAGTAAAAAGC
AAAAATTCTTTTTTTAGGGGGATATAGCCCCTCTACCCAGCCCCTGTTAG
CTGTAGTTTTTAATATAATTTAATATATGGTATTAATTTGGTCTCCATAT
TCTCAAGCATAAAATGAATCAATTTCTAATTTCTGCATTGTAACGTTTAA
TGATTGCCACTTTAAATACAATTTGCAATACATAGTATGTAGACTCCATT
TTGAGAATAATCATTCTAGCTTGATTTTATGTTGTGGGTCACATTTGTAT
ATGTTCATTGATCATTTGATAACATAAGTATAACTATTAATTATTCATTA
GGGATTGAAAATTGCTCCTCCTGAAGCTCCGGTCACGGGATACATGTTTG
GCAAAGGTATTTATTTTGCGGATATGGTATCAAAATCCGCCAATTATTGT
CACACCTCTAAGAAAAAGAATACGGGTCTTTTGATGCTTTGTGATGTTGC
TTTGGGCAATATATATGAAAAAACAAGTGCTGAGTATGTTGAGAAGTTAC
CTCCTGGAAAGCACTCAACAATGGGCATTGGTAAAACTCAGCCGGATCCA
AATGATGTGACGGAAATAGACGGGTCCACTATTCAATATGGAAAGAGTGT
CAAAGATGACAATCTAAAATCCGACTTACTCTATAATGAGTTTATTGTCT
ATGATGTTGCTCAAGTTCAATGCAAGTACTTGTTCCGTTTGAAGTTTAAT
TATAAGATA

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