EMLSAT00000007390, EMLSAT00000007390-703237 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007390
Unique NameEMLSAT00000007390-703237
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s41supercontigLSalAtl2s41:643434..645644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007390 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007390EMLSAG00000007390-690156Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032419EMLSAE00000032419-741347Lepeophtheirus salmonisexon
EMLSAE00000032420EMLSAE00000032420-741348Lepeophtheirus salmonisexon
EMLSAE00000032421EMLSAE00000032421-741349Lepeophtheirus salmonisexon
EMLSAE00000032422EMLSAE00000032422-741350Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779076auto779076Lepeophtheirus salmonispolypeptide
EMLSAP00000007390EMLSAP00000007390Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007390

>EMLSAP00000007390 ID=EMLSAP00000007390|Name=EMLSAP00000007390|organism=Lepeophtheirus salmonis|type=polypeptide|length=568bp
MFPKNKERRSLWIKALSYNNWEPSKYSALCDLHFLSSDYKLQSEDTNKYR
STDISIKILSKDAIPTQFPNMPSYFSKPAKIVRSKASLXSTRILKEKENI
MNKIHACEMADTISSISELNLKLDRARLPDGIYERFDSIDQALIFHNLQF
SDSHGFFVGFCAKVNLDLSIRMYRNKELSFQILNQIIDNNHINKCDILLN
ILAYLNSLSTSDFVSENSTETNVEDEIESVIKRLQCLNPHLDEHQEKKLS
FLTEQLSLLIKAPSQRRYTTLVELLKEVLTLPTIRRLSELSTSLNLETGL
SNTTVKYLKTRLDSFENHQEKSISIVFDETYCTGGVDYFSGSFFGLREGE
HISKTIFCVLIKSLHSTHNEIAIHPISKLNAEIVKKNVFDQVAQVVSQIG
FKVRATICDAHTINQKMYSSDLCHRNLRPYIFNPNSPKSKIYLLFDSVDV
MKNFFNNFLSRTHFVCPNFRGKLMEGKVSHIVDLYNLELGDPLKIAHKLT
ERVLEPLSIEKMNVKLTDNFSCWLDEWERLGDEATSLTKDTFLAAKQTST
GLYMMSQELLDEVDVNHV
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mRNA from alignment at LSalAtl2s41:643434..645644-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007390-703237 ID=EMLSAT00000007390-703237|Name=EMLSAT00000007390|organism=Lepeophtheirus salmonis|type=mRNA|length=2211bp|location=Sequence derived from alignment at LSalAtl2s41:643434..645644- (Lepeophtheirus salmonis)
ATGTTTCCAAAGAATAAGGAACGACGAAGTCTTTGGATTAAAGCTCTCTC
TTATAATAATTGGGAGCCTTCAAAATATTCTGCTCTATGTGATCTGCATT
TTTTATCCTCCGACTATAAACTTCAATCTGAGGATACGAACAAATATCGG
AGTACGGATATCTCTATAAAAATATTAAGCAAGGATGCTATACCAACCCA
GTTTCCAAACATGCCCTCCTATTTTTCCAAGCCAGCCAAAATAGTAAGGA
GCAAAGCATCTCTCKCTTCCACTCGGATCTTAAAAGAAAAAGAAAATATT
ATGAATAAGATTCATGCATGTGAAATGGCCGATACTATTTCTTCGATATC
AGAACTAAATTTAAAACTGGACAGAGCTCGCTTACCTGATGGGATTTATG
AGCGCTTTGACTCCATTGATCAGGCATTGATATTTCATAATCTTCAATTT
TCGGATTCACATGGATTTTTCGTCGGATTTTGTGCCAAAGTTAATTTAGA
CTTATCAATTAGAATGTGGTCAGTATTTTAGTCTGTTAAAATGTACATGC
ATTAATAATCATGTATATTTCAATTTTTCAGGTACAGAAACAAGGAGCTT
TCATTTCAAATACTTAACCAAATCATTGACAATAATCATATTAATAAGTG
TGATATTTTATTGAACATACTGGCCTATTTGAATTCCTTGTCCACTTCCG
ATTTTGTTTCTGAAAATTCAACTGAAACCAATGTTGAAGATGAAATAGAA
TCAGTTATTAAGCGTCTCCAATGCCTTAATCCTCATTTAGATGAACATCA
AGAAAAAAAACTTAGCTTCTTGACAGAACAATTATCCCTCCTTATAAAAG
CTCCTTCACAGAGGAGATATACTACATTGGTGTATGCTTTGTCTCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTATTAAGCGTCTCCAATGCCTTAATCCTCATTTAGATGAACATCAA
GAAAAAAACTTAGCTTCTTGACAGAACAATTATCCCTCCTTATAAAAGCT
CCTTCACAGAGGAGATATACTACATTGGTGTATGCTTTGTCTCTGTCATG
GAAAAGTTTTTCTACTGCTTTATACAGAGAGCTCCTCAAAGAAGTCCTTA
CTCTTCCAACTATACGTCGACTTTCAGAACTGTCAACATCACTTAATTTA
GAAACAGGACTTTCGAACACAACTGTTAAATATCTGAAGACTCGTTTGGA
CTCTTTTGAAAATCATCAAGAAAAAAGCATTAGTATTGTGTTCGACGAAA
CGTACTGCACAGGAGGAGTCGATTACTTCTCTGGATCGTTTTTTGGACTT
AGAGAAGGTGAACATATATCCAAGACAATATTTTGTGTTCTGATTAAGAG
CCTTCATTCTACTCATAACGAAATAGCGATACATCCCATATCCAAATTGA
ATGCTGAAATTGTAAAAAAAAATGTTTTTGACCAAGTTGCCCAAGTCGTT
TCTCAAATTGGATTCAAAGTTCGTGCTACAATATGTGATGCCCATACAAT
AAATCAAAAAATGTATTCATCTGATCTTTGTCATAGAAATCTTAGGCCCT
ATATTTTCAATCCTAACAGTCCAAAATCTAAAATCTATTTACTTTTTGAC
TCAGTTGATGTCATGAAGAACTTTTTTAACAACTTCTTGTCCCGAACTCA
TTTCGTATGCCCCAACTTCAGAGGAAAGTTAATGGAGGGAAAAGTTTCAC
ATATTGTAGATCTTTACAATCTTGAACTAGGAGACCCCCTTAAAATTGCC
CACAAACTCACTGAGAGGGTATTGGAGCCACTGTCAATAGAAAAAATGAA
TGTGAAGCTTACAGATAGTTTGTTTCATGAGTCAACGATCGCTGCACTTA
GACATTATGGAGAAAGAAATGATAAAAAAGATTGGCTTGTCACAGCAGAC
TTATTGGAAGMATTTTGGACGTGGTGGYTGATTGTAAATACACGATCCCC
ACGAATTGGAAGTTACAAGATAAAWGAATCGAAAAAATCTCTGCTTCACT
TTTTAAAAGATTTCTCATGTTGGCTTGATGAATGGGAAAGACTCGGAGAC
GAAGCAACAAGTCTCACCAAGGATACGTTTTTAGCAGCTAAACAAACATC
AACTGGACTATATATGATGTCTCAAGAATTACTGGATGAGGTCGATGTCA
ATCATGTTTGA
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