EMLSAT00000007399, EMLSAT00000007399-703246 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007399
Unique NameEMLSAT00000007399-703246
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s420supercontigLSalAtl2s420:464317..464593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007399 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007399EMLSAG00000007399-690165Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032479EMLSAE00000032479-741407Lepeophtheirus salmonisexon
EMLSAE00000032480EMLSAE00000032480-741408Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777905auto777905Lepeophtheirus salmonispolypeptide
EMLSAP00000007399EMLSAP00000007399Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007399

>EMLSAP00000007399 ID=EMLSAP00000007399|Name=EMLSAP00000007399|organism=Lepeophtheirus salmonis|type=polypeptide|length=90bp
MKAVKKKDDINVDTVAILNYTTGCIMSCAWKNPKYRTVLTIGNGTNAFYL
QEKLWIHGTEIRMNFNICMIINTEWGTFGNHGKLDFIQTK
back to top

mRNA from alignment at LSalAtl2s420:464317..464593-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007399-703246 ID=EMLSAT00000007399-703246|Name=EMLSAT00000007399|organism=Lepeophtheirus salmonis|type=mRNA|length=277bp|location=Sequence derived from alignment at LSalAtl2s420:464317..464593- (Lepeophtheirus salmonis)
ATGAAAGCCGTAAAGAAAAAAGATGATATAAACGTGGATACTGTAGCAAT
ACTTAATTATACGACGGGTTGTATCATGTCATGTGCTTGGAAGAATCCAA
AATATCGAACTGTTCTTACTATCGGAAATGGAACGAATGCCTTTTATCTA
CAAGAGTAGGAAATTGTGGATCCATGGGACTGAGATTCGAATGAACTTCA
ATATATGTATGATTATCAATACGGAATGGGGTACATTTGGAAATCATGGA
AAATTAGACTTTATTCAAACGAAATGA
back to top
Add to Basket