EMLSAT00000007404, EMLSAT00000007404-703251 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007404
Unique NameEMLSAT00000007404-703251
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4218supercontigLSalAtl2s4218:2116..3017 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007404 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007404EMLSAG00000007404-690170Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032495EMLSAE00000032495-741423Lepeophtheirus salmonisexon
EMLSAE00000032496EMLSAE00000032496-741424Lepeophtheirus salmonisexon
EMLSAE00000032497EMLSAE00000032497-741425Lepeophtheirus salmonisexon
EMLSAE00000032498EMLSAE00000032498-741426Lepeophtheirus salmonisexon
EMLSAE00000032499EMLSAE00000032499-741427Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768233auto768233Lepeophtheirus salmonispolypeptide
EMLSAP00000007404EMLSAP00000007404Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007404

>EMLSAP00000007404 ID=EMLSAP00000007404|Name=EMLSAP00000007404|organism=Lepeophtheirus salmonis|type=polypeptide|length=213bp
MFRKPVRDQSLFKFMEVLKSEVWVSILGALILTAFLLWFLEKYSPSSARN
NLDKYNEPVRVFEVKESFWFATTSFTPQGGESFWFATTSFTPQGGDLPQN
ISGPILSSTYWLFVVLILATFTANLEAYLTVERMKTSQSEVNFSGVRNFI
IHGYFLNLAKAEDDIYMAWKDIFLKKAIEGAGTVSSEDEGFQRVLKDENI
LFAFIYDVYDVNI
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mRNA from alignment at LSalAtl2s4218:2116..3017-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007404-703251 ID=EMLSAT00000007404-703251|Name=EMLSAT00000007404|organism=Lepeophtheirus salmonis|type=mRNA|length=902bp|location=Sequence derived from alignment at LSalAtl2s4218:2116..3017- (Lepeophtheirus salmonis)
ATGTTTCGGAAGCCTGTTCGAGATCAATCTCTTTTTAAGTTTATGGAAGT
TCTAAAAAGTGAAGTTTGGGTCTCTATTCTAGGTGCTCTTATTTTAACAG
CGTTTCTCCTTTGGTTCCTTGAAAAATACTCACCCTCTTCTGCTCGAAAC
AATTTGGACAAATACAATGAGCCTGTACGAGTATTTGAAGTTAAAGAATC
CTTTTGGTTTGCAACAACCTCATTTACACCTCAGGGAGGAGGTAAGGATT
TACCACCTGTATGTATGTATCTATGTAAAAACTTACTTTTAATTTAATCC
GGAGATTTACCACAAAATATATCAGGACCAATTCTATCNTTAAAGAATCC
TTTTGGTTTGCAACAACCTCATTTACACCTCAGGGAGGAGGTAAGGATTT
GCCACCTGTATGTATGTATCTATGTAAAAACTTACTTTGAATTTAATCCG
GAGATTTACCACAAAATATATCAGGACCAATTCTATCATCTACCTATTGG
CTCTTTGTCGTTCTAATCCTTGCAACTTTTACTGCGAATCTAGAAGCTTA
TTTAACCGTTGAAAGAATGAAAACATCAGTCAAAAATTTGGACGAATTTG
CATAGCAATCCGAAGTTAACTTTTCTGGTGTGAGGAACTTTATCATACAT
GGTTATTTTTTGAATTTGGCAAAGGCTGAGGATGATATTTATATGGCATG
GAAGGACATTTTCTTGAAGAGTAAGAAAAATAGTTATTCACACGTTTGGA
ACTATCCAGTGTAMCAAAAATTTCAACAAGTTGTAGAGGCAATAGAGGGA
GCTGGTACAGTTAGTAGCGAGGATGAAGGATTTCAAAGGGTTCTAAAGGA
TGAAAATATACTTTTTGCATTCATCTATGATGTGTACGACGTAAATATTT
AA
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