EMLSAT00000007417, EMLSAT00000007417-703264 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007417
Unique NameEMLSAT00000007417-703264
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s421supercontigLSalAtl2s421:404527..405169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007417 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007417EMLSAG00000007417-690183Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032543EMLSAE00000032543-741471Lepeophtheirus salmonisexon
EMLSAE00000032544EMLSAE00000032544-741472Lepeophtheirus salmonisexon
EMLSAE00000032545EMLSAE00000032545-741473Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777336auto777336Lepeophtheirus salmonispolypeptide
EMLSAP00000007417EMLSAP00000007417Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007417

>EMLSAP00000007417 ID=EMLSAP00000007417|Name=EMLSAP00000007417|organism=Lepeophtheirus salmonis|type=polypeptide|length=175bp
MKCFIIVALVLVGTSTSESCTSSESSFLFEGSWLEMKENRTNVVEYLMQY
NISRENATKYNNGPTTMECIQLTEDGYKVNGIRPDGVPYNMSITWRKEAK
RVYTYPNQSLLFDAEVVRDNVSHSHNVMLFNVYYEGLDTPIFIAERNFTN
EGYMNYSQRHVATNITTYTLYKKQD
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mRNA from alignment at LSalAtl2s421:404527..405169-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007417-703264 ID=EMLSAT00000007417-703264|Name=EMLSAT00000007417|organism=Lepeophtheirus salmonis|type=mRNA|length=643bp|location=Sequence derived from alignment at LSalAtl2s421:404527..405169- (Lepeophtheirus salmonis)
ATGAAGTGTTTCATCATTGTAGCTCTTGTCCTTGTTGGAACCTCGACTTC
CGAGTCTTGTACTTCTTCCGAGTAAGTTAAATTACCGTTGAAATAAAACC
TTTATTATCATTTATATCTGGACAAAACAGGTCATCCTTTTTATTTGAAG
GATCTTGGCTTGAAATGAAAGAAAACAGAACAAATGTTGTGGAATACTTA
ATGCAGTACAATATAAGCAGGGAAAATGCCACCAAATATAACAATGGTCC
AACTACAATGGAATGCATTCAATTGACTGAAGATGGTTATAAAGTCAATG
GAATAAGTAAGGCTCCATAATCTTTTTTTTTATTATTTAATTTTAATATC
GCTTAATTCTAGGACCTGATGGTGTTCCTTATAATATGTCTATAACATGG
AGAAAGGAAGCAAAAAGAGTATATACTTATCCAAATCAAAGTTTATTATT
TGATGCAGAGGTTGTCCGGGACAATGTTTCACATAGTCATAATGTGATGC
TTTTCAACGTTTACTACGAAGGGCTGGATACTCCAATTTTCATCGCTGAG
CGTAACTTTACAAATGAAGGGTACATGAACTATAGTCAAAGACATGTAGC
AACCAATATCACCACTTACACCCTATACAAAAAACAGGATTAA
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