EMLSAT00000007420, EMLSAT00000007420-703267 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007420
Unique NameEMLSAT00000007420-703267
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s421supercontigLSalAtl2s421:485845..486576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007420 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007420EMLSAG00000007420-690186Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032554EMLSAE00000032554-741482Lepeophtheirus salmonisexon
EMLSAE00000032555EMLSAE00000032555-741483Lepeophtheirus salmonisexon
EMLSAE00000032556EMLSAE00000032556-741484Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778073auto778073Lepeophtheirus salmonispolypeptide
EMLSAP00000007420EMLSAP00000007420Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007420

>EMLSAP00000007420 ID=EMLSAP00000007420|Name=EMLSAP00000007420|organism=Lepeophtheirus salmonis|type=polypeptide|length=170bp
MKCFIIVALVLVGVTTSEVSKPSFLFQGSWLEMIEKRSGTVEYLMKLGVS
EANATAYSKGPITMQCIQLTEEGYEITGIHRGAPYNTSITWRKEAKRPYT
SSGVEMKFDAEVLKDNATNYKLMRFNAYNKTSGSLVFFTQRTFTSEGYMN
YSHTIAATKQTAYTLYQKQV
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mRNA from alignment at LSalAtl2s421:485845..486576+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007420-703267 ID=EMLSAT00000007420-703267|Name=EMLSAT00000007420|organism=Lepeophtheirus salmonis|type=mRNA|length=732bp|location=Sequence derived from alignment at LSalAtl2s421:485845..486576+ (Lepeophtheirus salmonis)
TGCTAAGTTAAGTCAGTGTTTGAGTTCATCATGAAGTGTTTTATCATTGT
AGCTCTTGTCTTGGTTGGAGTAACTACTTCTGAGGTGTCCAAGTAAGTTG
AATTACTAGTGAAATAAATTTGTATTAAATTTTATCTCCGGACAAAATAG
GCCATCTTTTTTGTTTCAAGGATCTTGGCTTGAAATGATAGAAAAACGAA
GTGGTACAGTAGAGTATTTAATGAAGCTCGGTGTTAGCGAGGCAAATGCC
ACTGCATATAGCAAAGGTCCAATAACGATGCAATGTATTCAACTAACTGA
AGAGGGTTACGAAATTACAGGAATACGTAATGTTCCAAAACTCCTTGTTT
ATATTTTATGTTAATATTGGGTTTTTTTAGACCGTGGTGCTCCCTATAAT
ACCTCTATAACATGGAGAAAGGAAGCAAAAAGGCCATACACATCTTCAGG
AGTTGAAATGAAATTTGATGCAGAGGTTTTGAAAGACAATGCTACAAATT
ATAAGCTAATGCGTTTCAATGCTTATAACAAAACATCAGGCTCTCTGGTT
TTCTTCACTCAACGCACCTTTACGAGTGAAGGGTACATGAATTATAGTCA
TACAATTGCTGCAACGAAGCAGACCGCTTACACTCTCTACCAAAAACAGG
TGTAAATCTACCTTAATCCCCTTAGTTTTTAATTATAAATTTGTAAACTA
TACATTTTGTCTGAATAAATACGTGCATGCAT
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