EMLSAT00000007452, EMLSAT00000007452-703299 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007452
Unique Name	EMLSAT00000007452-703299
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s426	supercontig	LSalAtl2s426:69898..77705 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007452 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007452	EMLSAG00000007452-690218	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000032680	EMLSAE00000032680-741608	Lepeophtheirus salmonis	exon
EMLSAE00000032681	EMLSAE00000032681-741609	Lepeophtheirus salmonis	exon
EMLSAE00000032682	EMLSAE00000032682-741610	Lepeophtheirus salmonis	exon
EMLSAE00000032683	EMLSAE00000032683-741611	Lepeophtheirus salmonis	exon
EMLSAE00000032684	EMLSAE00000032684-741612	Lepeophtheirus salmonis	exon
EMLSAE00000032685	EMLSAE00000032685-741613	Lepeophtheirus salmonis	exon
EMLSAE00000032686	EMLSAE00000032686-741614	Lepeophtheirus salmonis	exon
EMLSAE00000032687	EMLSAE00000032687-741615	Lepeophtheirus salmonis	exon
EMLSAE00000032688	EMLSAE00000032688-741616	Lepeophtheirus salmonis	exon
EMLSAE00000032689	EMLSAE00000032689-741617	Lepeophtheirus salmonis	exon
EMLSAE00000032690	EMLSAE00000032690-741618	Lepeophtheirus salmonis	exon
EMLSAE00000032691	EMLSAE00000032691-741619	Lepeophtheirus salmonis	exon
EMLSAE00000032692	EMLSAE00000032692-741620	Lepeophtheirus salmonis	exon
EMLSAE00000032693	EMLSAE00000032693-741621	Lepeophtheirus salmonis	exon
EMLSAE00000032694	EMLSAE00000032694-741622	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto771345	auto771345	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007452	EMLSAP00000007452	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s426:69898..77705+

protein sequence of EMLSAP00000007452

>EMLSAP00000007452 ID=EMLSAP00000007452|Name=EMLSAP00000007452|organism=Lepeophtheirus salmonis|type=polypeptide|length=973bp
MEDIRKKSLVEEQGHILVQSMFSLVRTSLQFERMKSYGYERVGTSTGIIY
DDRMGDFYCEWDSTFSECPDRFHSILIRXRELNILDRCXDXKPIRAKDTE
VTKFHDLELIEELKRISKITDLQELKEMAEKYERIYLHPDVFKCAMLAAG
CSIELTRSVFQGKLKNGMAIIRPPGHHALQEKFNGYCFINNAVVSAKTGF
DLGAERILIVDWDANHGQGIQRAFYNNNRVLYFSIHRYNNGRQWPNLRES
DLDYIGAESGEGYNVNVPLNSTDNGDWEYLAIFQQLLIPLAYEYRPNLVS
PACFAHLTHSLCAIANGKVVSLLEGGSFIPSLTESVAQTILTLIGDRLPR
LPSEYKKPKDEVLKTIHEIKTVLRQKWKCFELQDGLDSQISERVWLGPSE
ESTEIELQEESEEARSKKMEKKFEDIISNLSSQLNSRNSNVSSYVCFCSD
DEKLEPEFLNDSSGKFIWLNTQKALKEELEWLSMQGLNVTVSSSSLLAAG
SIFQVIDAVHNNDAIAGISLIDHTRQTGISDLGPVYGKLKHRINRSMSVI
LNDGMITPKLNSFICENESILRFNILHSRDQDESNPFFDESEENINKHEV
TIRLGNYCHPVDSDYLNLMYRILLPVGIEKEYEPFSNSKLALQFDQSDEK
DTESTPLLTNISVEVEGYHSIERLDSDSLSESDSIEVQLTSSESSNQKKA
LVLFALFSFIQSSAFVDWNPIENSVLSAFKSWTETTVSWQANVAILPSIL
LQWPLCWILQKFKLSTVIKFMGVLPLCLATIARLLPLLALENPGEVFKTL
VFISSFSIGVIGVIFYSSLSKFSSIYFGSAAMTLPTGIAMLFSNIGIVFS
SVIGPYIVEDPSFSIPDEEKILQAEIRNYLLLYAVIIGTLSIVIIFTFPD
PIYVGQVNQSPSIGDNIYKIMKNKDVTLLLSTYALSSVPIYWSSTFLPIY
FERYHFGQEIVGGLMSASVVIRF

mRNA from alignment at LSalAtl2s426:69898..77705+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007452-703299 ID=EMLSAT00000007452-703299|Name=EMLSAT00000007452|organism=Lepeophtheirus salmonis|type=mRNA|length=7808bp|location=Sequence derived from alignment at LSalAtl2s426:69898..77705+ (Lepeophtheirus salmonis)
TTCCCTCCTCGCCAATGACCAATGAGTTCTAATAGTTTTAAATAAACAAT
AATATTGAATTGTGTTGCGGATGTGAAGAATATCAAGCTGTTGATGGAGC
TATGATCGGGTTATAAGCGAATTACATGTCCTAAGTGTCTAAAAAGAAAA
TGTCAAATCTCAATGTTGAAGAGATCATTCCTTCGGGTGCACGTCCCACT
AATTCCTGCACAGATCCCAATGCTCCTTTATCTAAGAGAGCTAGAAAACG
TCTTCAAAAAAGATTGAACTATTTGGAGAGCAGGAAAGAAAGAAAGAAGA
TTAGAAAGGAAAAAATAAAGTCCGGAGAGTTGAGGTATAGGATTAAAGGA
CTTCAAAGAATATATTTAATTCATTATTTCCCTTTCAGACCCCCTAAAAA
CTCAAGGAAGCTCGTCAAAAAAACGGGAACCCAGGTCAAAGACTCTAAAT
GCAAGATTGGAATAATACTAGACATGTCTTGGGAGCACTTGATGAATCAA
AAAGACTTGGGAAAGTCCTTGAAGCAAATTATGAGAGTCTATTGCATTAA
TCGTAGATTGCCTAATCCATTGAAACTCCATGTTACTAGCTTTACAAGCA
TTGTTAAGAAAGAAATGGATAAAAATGAAGGCTACTTGAATTGGGACTGC
GAATTCCATGAAGCCCATTTTATGAAAGCATTTGAATCCACAAAGGATCT
TATCTATCTCTCTAGTGAATCGGAAACTGTTTTAGAGACTTTACAGGACA
ATAAATTTTATATCATTGGAGGGCTTGTAGACCATAATTTACACAAAGGC
GTATGCCATGAAAAGGCAATAGAGCTTGGTATTCCTACTGCTCGTCTTCC
CATTAGTGAATACATTAAGCTAAAAACCCGTAAAGTGCTTACAATTGATC
AAGTATATAATATTATAGCTCTTGTATCTGAGGGAAAGTCTTGGAAGGAT
ACTCTATTAGAGGTCTTGCCTGAAAGAAAAGGAGCTGTATCCATGGTAAA
CGAAGAAAATAACTCGAATGATGAAAATGTTTTATGTACTTGAATATTGC
TCTATAATTCTTATAATATGTATTGACTAAAATACAATCATACATTCTAC
TTATTATGAGTTTCTTCTTATTTAAAACTTTTTGTACGAACATGATTGAC
TAATGACAATTTTAAGTTTATTAGGTGCGTAAAGAGAACTGTCCAATTTT
GAAGAATTTTGGCGACACAAAGCTATACATTATTTAATATTCAATTAAGG
CCTAAACAGTCTCTTAAGTGTTAATTATAAATTATTGCCTATAGCTAGTC
AATGAGATAATAATGTAATTCTATTCTTTTTACTCAAATGGTTACTCCAA
ACAGATCTTCACTGTACTCTCCTACACGCTCAGTTTTTTATAAAAATCCA
CTCAAATATAATTATTGTAACTATTATTACTTAAGAGTTATATTGAATTT
TCTATAGTAATTTAAAAACATTTGTCTTTGAATTTAAGATTTTGTGCCGT
CAATCCTTAACTTCTAAAGTATTTAGATATACAAGCAAAATTAGTATATA
TTATAAGACACATTTACTTATTATAAATCATATAGTTCATCTTTGGCATT
GGCATTATAACAATTATCCCTCAAGATTTAAATTGAACCAAAAATCTTAT
TAAGATTCAACCTTTGATCGATATTTATTTCCTCTCTACATTTTGTGTGT
TGATGAGTATCTCACTATCTAGCAGAGTTAAGCATTAAAAAAAGAGGTCT
GTGTGATTTACAATGATGTTTTTTATGTTTAATTGAATTATTAAATTGAA
AGCAATTGTCATAGCTTGTTATATTATTAACACAGTCTTCAGTTGAATAA
GAACATTGAGGAGATAACATGGAAGATATAAGGAAAAAATCCTTAGTTGA
AGAACAAGGACATATCCTTGTTCAAAGTATGTTTTCTCTTGTAAGTCAAA
TCAAATTATATGTGTGTAATGAGGATTTTCATTCTTTTAAAAAATGGCAT
GAAGTGATAGGTGATGCACATAGTAGCAAGATCTCAATGTTGTACTTGCT
TCGAGAGAAAAGGGGTGTCACTTTATATTATTTACATTGTGATATAATTC
AAATAAAATATTATATGATAACACTCGTCTATTTTTAAAACTAGTTTTTA
TCTATTTGAAATTATATCTATTTCCATTACGATTTCCATAGTGCATGATA
TTAAAGTATTTTTAAAATTCTTACTACACATTCATAATAGGTCAGGACTT
CTCTACAGTTTGAGAGAATGAAATCGTATGGATACGAGAGAGTAGGAACA
TCTACGGGCATTATATATGATGATCGTATGGGAGATTTCTATTGTGAATG
GGATTCTACCTTTTCAGAATGTCCAGACAGATTTCATTCTATTCTCATTC
GCCWAAGAGAACTTAATATCCTAGATCGATGTGWAGATATRAAGCCAATA
CGAGCCAAGGATACAGAAGTAACCAAATTTCATGATTTGGAGTTGATTGA
AGAATTAAAACGTATTTCCAAAATCACCGATCTACAAGAATTGAAGGAAA
TGGCTGAAAAGTGCATTTATAATCCCAATAACTTTTTTTAAATTAGTGCT
AAATTAATTTAATCCTAGATATGAAAGAATTTATCTTCATCCAGACGTAT
TCAAATGTGCCATGTTGGCAGCTGGATGTAGTATTGAACTAACGAGGTCT
GTATTTCAAGGAAAATTAAAAAATGGAATGGCAATAATTCGTCCTCCAGG
ACACCATGCTCTTCAGGAGAAATTTAATGGTTATTGGTAAAAGAAAAGTT
CATCCCTTTTTTCACGTTTTTTAAACTGTATTCCAATTAGTTTCATCAAT
AACGCTGTCGTAAGTGCAAAAACAGGATTTGACTTAGGTGCAGAAAGAAT
CCTCATAGTTGATTGGGATGCAAATCATGGCCAAGGAATTCAAAGAGCAT
TTTATAACAATAATCGAGTTTTGTATTTTTCAATTCATAGGTAAGATTAT
TTTATAATTAATTAAATTGATGGTTTAGAATAGGTTTTTATTTATAAGAA
ATTTTAAAGAATATTATTAATTAGAAATTAATTAATTGCTTAAAATACAT
ACGAAACTTCACATCTAGATTAATATGTAAATAAATCAATTGTTCACAGA
TGTCATTATTCGATATATTTTAATATATGTATATAGTATGTTCATTCGAG
GAAATCATATTTCATMAAGCCACTATTGGCATTTGGATGTCGATATAAAG
TTTTAAATAAGGTTTTATTCATATATCAATGAAAATTGATCAAAAAATAT
GCATTAACTAATCAAAGAAATAGCAAATTATGTATGATATTGACTCAATC
TTGATAGGGATCTGCGAAGTGAAAATACTTTTTGCAGTTACAAACATAAT
TTTTATAATTAAATCATTGAATTGTCATTGTAAGCATTTGAACACATATT
TTACTATTAACTATATTTTTTGTATTGTAGATATAATAATGGAAGGCAAT
GGCCAAATCTAAGAGAATCTGATCTAGATTACATAGGAGCTGAGAGTGGC
GAAGGTTACAATGTTAATGTTCCATTAAACTCTACAGACAATGGGGATTG
GGAATATCTTGCTATATTTCAACAATTGTTGATACCTTTAGCTTATGAAT
ACCGTCCAAATTTGGTTATAATTGCTGCTGGATATAATGCAGCTATCGGT
TGTATCGAAGGGGAACAATCGGTACTTATTTATATTAAAACTACCTATAA
TTAACTATTTCATTGATAGGTATCACCCGCTTGCTTTGCACATTTAACCC
ATTCTTTATGTGCTATAGCTAATGGAAAGGTTGTTTCTTTACTTGAAGGA
GGTTCTTTTATCCCTTCTCTCACAGAGAGTGTAGCACAAACAATTCTAAC
TTTGATTGGTGATAGACTTCCAAGATTACCATCTGAATACAAAAAACCAA
AGGATGAAGTATTAAAAACAATACATGAAATTAAAACTGTATTAAGGCAA
AAGTGGAAATGTTTTGAGGTTAAATTTTCAAAAATAACATCACTATCTCA
TTTTTCAAATATTTATCTTTCCAAAAAAAAAATTAGTTACAAGATGGTCT
AGATTCACAGATCTCAGAAAGAGTATGGTTGGGACCATCTGAAGAATCTA
CTGAAATTGAGCTCCAAGAAGAATCTGAAGAAGCAAGATCAAAGAAAATG
GAAAAGAAATTTGAAGATATCATTTCAAATCTCTCGTCTCAATTAAACTC
AAGGAATTCTAATGTGAGCTCTTATGTCTGCTTCTGTAGTGATGATGAAA
AACTAGAACCAGAGTTTTTAAATGATTCATCCGGAAAATTCATTTGGTTA
AACACTCAAAAAGCATTAAAAGAAGAACTGGAATGGCTTTCCATGCAAGG
TCTAAATGTAACTGTTTCTTCTAGCTCACTATTGGCTGCAGGATCAATTT
TTCAGGTACTTTTTATTCTTCTGTAAGATTTTTATTTGACTATATTTTGT
TTTAAAAATTGCAATATATATCCAGGTCATTGATGCCGTCCACAACAATG
ATGCGATCGCTGGTATATCTCTTATTGATCACACTCGTCAAACAGGAATA
TCAGATTTAGGACCCGTTTATGGAAAGCTTAAACATAGAATTAATCGTTC
CATGTCTGTTATTTTGAATGATGGGATGATTACCCCAAAATTAAATTCCT
TTATTTGCGAAAATGAAAGCATTCTTCGTTTTAATATCCTTCATAGTCGA
GATCAAGACGAAAGCAATCCATTCTTTGATGAATCTGAGGAAAATATAAA
TAAACATGAAGTAACTATTCGGTTAGGAAACTATTGTCACCCTGTGGATT
CCGATTATTTGAATCTGATGTATAGAATTCTTCTTCCAGTCGGGTACATA
TAGCTAGAAAATTTATTTTATCTTCTATTTTCATCTGATATTAATATTAC
ATATATTTATTTTAAGATACGAATACTCTCCAGAAATAATTTATGTTTAT
GCAAGTCTGGGATCTGGATCATTATCAGCGATTGGATTTAGTCATCTCGT
TCATACTTTAAGCACATTAGCTAATAGTAAAATAGTAGTCATATTTGAAG
GAAGTTGCAACCCCTTCGACAATCCTCGATCTCTTCTTAGATCTGTTAAA
ACCCTTCTAAAAGATTCCCTCCCTAATTTTGAAGTATATAGCCCTAGCGA
TAAAAATTCCTCAATCATTGAAAAATGCAGGAAAGCCTTAAGCGTGAAAT
GGGAGTCTTTGAAGGATGATTAAGGATAAACGCTCTGGATTCATTGTATT
CAATGTTTTATGGTGTATATCTTATTTAATATGGAGAGCCATGAACTATT
ACTAATAAAATAATCAAAACTCAAACCTTAATTTCCAAAAATATTATGAT
GTGTTGCTTATATTTATTTCCACCTTGATTTAACCTTTAATTAATTATTT
TCGTAGTTATTATTTAAAAAAAATAAAAAAACATGTATAAAAAAAGCCAT
TTAATCCATTTCTAATTAAACTTAAATTACATTTGTTGAATGAATATGCT
GTAATTAATCTATGTACACCTCCGAGATAGCAATTTAAGAAGTCACTAAA
AAAAGCTCTAATAATTTATTCATGCCTACAAAGATATAAAGGTTTTGTGA
GCAGAAAAAAGTTTTAATGCATTTGACGTCTCTCTCCCAGCTCAATACAT
ATATCAGCTGTTGATTGAGCTACCCTCATAAGTCATAAGTGTCTTGAAAA
TTGATTTGTTGAGCTAAGAATAAAGAATAGGGGAGAGTGACGTAATTGCC
TAACTATTGTATAATTTTGGGTTTATTTTTCTTTCTCTTTTTTGGTATAA
AGGTTTAGAGATACGGGTAAAATATATTGGAGTTAAATGTCATTATGAAT
GAATAAATCTGATCTCACGTAGCTAATGCTGAGAATAAATGCACCTTATT
GTTAATTTAATATCTTATGAAATCTAAGTTTTCATTGCTGCACTTGGAGT
TAAAGTTAAACTTATTATTGCTTCCTTTGTGTCTTTTATTTGTATAAGCT
ATTATTAATGTTGTTATCGCGAAATCCCTCCATGCAATGAATTCCTTAAG
GATTGAGAAGGAATATGAACCATTTTCTAATAGTAAACTTGCTCTACAAT
TTGATCAAAGTGATGAAAAGGATACTGAGAGTACTCCTTTACTCACAAAC
ATAAGTGTTGAAGTTGAAGGATATCATAGCATAGAACGTTTAGACTCGGA
TTCTCTTTCAGAGTCAGACTCTATTGAGGTTCAATTAACCTCATCTGAGA
GCAGTAACCAAAAAAAAGCCCTTGTACTTTTTGCCCTTTTCTCCTTCATA
CAATCCTCCGCATTCGTTGATTGGAATCCCATTGAAAACTCTGTTCTCAG
TGCATTTAAATCATGGACCGAAACAACCGTATCATGGCAAGCAAATGTGG
CCATTCTCCCTTCAATCCTTTTGCAATGGCCTCTTTGCTGGATTCTACAA
AAGTTCAGTAAGTCTTCATCAACAGGTATTTTAAAACACTAAATTCGTTC
TAAATGTATGATCTAGAGCTTTCGACTGTGATCAAGTTTATGGGAGTACT
TCCTCTATGCTTAGCTACTATAGCAAGGCTATTGCCCTTGCTAGCGCTGG
AAAATCCAGGAGAGGTTTTTAAAACGTAAGATTTTGTACTTATACACTAA
CAAGTGGTATTTTTTTTTTCAAATTATATTTTTGAATACTTTTGTAGCTT
GGTCTTTATCAGTTCCTTTTCTATTGGCGTGATTGGAGTTATATTCTATA
GCTCTTTATCTAAGTTTTCATCTATCTACTTTGGATCTGCTGCAATGACC
TTACCAACGGGAATAGCCATGTTATTTTCAAACATCGGAATTGTTTTTTC
TTCTGTGATTGGACCTTATATTGTGGAGGATCCTTCTTTCTCAATACCAG
ATGAAGAAAAAATACTTCAAGCAGAGATACGAAATTATTTACTTTTATGT
AAGGAATGTTTAGATGAAAGTTGACTGAAACTTATATTAACAATCATCAT
AAATTTTATAATCATTTCTGTAGATGCTGTAATTATTGGAACTCTCTCCA
TTGTGATTATATTTACCTTCCCAGATCCAATATACGTTGGTCAGGTGAAT
CAATCTCCCAGTATTGGGGATAATATTTATAAAATAATGAAGTAAGATAT
ACACATTAGCTCCGACCTTTGAACCCTTAACTCATTTTGTTTACTCCATC
AGGAATAAGGATGTTACACTTTTACTTTCAACCTATGCTCTAAGTTCTGT
ACCCATTTATTGGAGCTCCACCTTTTTACCAATTTACTTTGAACGATATC
ATTTTGGACAAGAAATTGTTGGTGGATTAATGTCTGCATCTGTTGTTATA
AGGTTTTAGAAATATAACTTATTTTCGTTGATAATTTAAGTGAAAAATTA
ATGTTATATTCTATTGTATATTCAAGTGGTTTTATCACTGTGGTAACGAC
TAAACTGGTGGATTCAAGAAAAGTGGGTGCATGGATGATGATCTTACTGC
TATTTTTTACACAATTTATATCTTCTCTCATGTTGAGCTTATTTTTATGT
CAATATTTTCCATCCATTGAAGTATGTATTGGGTTATTTTTTGTTATTTC
CAATGCTATTGGACTTTCTGTGGGGCCTCTTGTCATACCTTATGGTTCTA
AAATTGGGGAAAACATATCTTATGAAATATTGAACGGTGCCTTTCATCAA
TTTTCATGTTTTTCTGGATCATTATTCTTATTAATATTTGCAATAGACGA
TAATAGGG

Add to Basket

Search form