EMLSAT00000007457, EMLSAT00000007457-703304 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007457
Unique NameEMLSAT00000007457-703304
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s427supercontigLSalAtl2s427:165169..167705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007457 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007457EMLSAG00000007457-690223Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000032704EMLSAE00000032704-741632Lepeophtheirus salmonisexon
EMLSAE00000032705EMLSAE00000032705-741633Lepeophtheirus salmonisexon
EMLSAE00000032706EMLSAE00000032706-741634Lepeophtheirus salmonisexon
EMLSAE00000032707EMLSAE00000032707-741635Lepeophtheirus salmonisexon
EMLSAE00000032708EMLSAE00000032708-741636Lepeophtheirus salmonisexon
EMLSAE00000032709EMLSAE00000032709-741637Lepeophtheirus salmonisexon
EMLSAE00000032710EMLSAE00000032710-741638Lepeophtheirus salmonisexon
EMLSAE00000032711EMLSAE00000032711-741639Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773666auto773666Lepeophtheirus salmonispolypeptide
EMLSAP00000007457EMLSAP00000007457Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007457

>EMLSAP00000007457 ID=EMLSAP00000007457|Name=EMLSAP00000007457|organism=Lepeophtheirus salmonis|type=polypeptide|length=307bp
MSLKASKSTYDYVVGQSCPTTDGRNCLFPFKYIGIEYDGCTTVDYGTTAW
CATSVDSITGATIEYGDCTSSCKMASTASTNGCKSTSGXACKFPFGYNGE
MFTQCTNADFGDTFWCAVSVNGNGDVQGYGTCSADCPRYSTISADKCATI
SGVSCTFPFKYNGKTYDACTTADNSGSPWCATSVNAQGESQGYGNCNTNC
QGVTYNQCSSQDFGGIFWCATSVDAAGNNLGYGTCSSSCPMETTIPSNKC
GTTDNHACIFPFTYSGITYTTCTTRDNSGTPWCATKVDVNAYYVDYGTCN
SICNVVN
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mRNA from alignment at LSalAtl2s427:165169..167705+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007457-703304 ID=EMLSAT00000007457-703304|Name=EMLSAT00000007457|organism=Lepeophtheirus salmonis|type=mRNA|length=2537bp|location=Sequence derived from alignment at LSalAtl2s427:165169..167705+ (Lepeophtheirus salmonis)
ATGTCTCTGAAGGCTTCCAAATCTACTTACGATTATGTTGTAGGTCAATC
ATGTCCTACCACTGATGGACGGAACTGTCTATTTCCATTCAAATATATTG
GTATCGAATATGACGGGTGTACAACTGTGGATTATGGAACCACGGCATGG
TGTGCCACATCTGTAGACTCGATAACAGGTGCAACTATAGAATACGGGGA
TTGTACATCTTCCTGCAAAAGTATGAAATACTAACTTATTTATTCGTGAG
TTCTGAGAAAAAGTGGAACTATTTGTATATTCTTAGTGGCATCAACTGCG
TCCACAAATGGATGCAAATCAACAAGCGGGGKTGCCTGTAAATTTCCCTT
TGGTTACAATGGGGAAATGTTCACTCAATGTACAAATGCTGACTTTGGGG
ATACGTTTTGGTGTGCCGTGTCAGTGAATGGAAACGGTGATGTACAAGGT
TATGGGACATGCTCTGCTGATTGCCCAAGTGAGTACTTAGAACCGTATAA
AGTACTAAGTTTCTAAATTCACAACTGGTTTTTTAATTCTCTTGTATAGG
ATATTCAACCATTTCTGCGGATAGTAAGTAATTTCTTTTTAAATGGAATA
ATTACTAATGATTATATTTTAGAATGTGCAACTATAAGTGGAGTGTCCTG
TACTTTCCCCTTTAAATATAACGGTAAAACATATGACGCTTGTACCACAG
CAGACAACTCCGGATCTCCATGGTGTGCAACATCAGTCAATGCCCAAGGA
GAATCTCAAGGTTATGGAAACTGTAACACAAATTGCCAGGGTAAGATGTC
ATTTTAAGGTGCAACTGAGATTAAAATCTATCAAATTTTAAATCTTTGAA
ATTTGATTTTCAAACTTTCATTTCCTCATTATCCATGTGTAATATATGTT
TAGTTACACATTTTTACAAATATAACATAAAATGAGATAGAATTAGCCAT
AATAACAAATATGTGAGATTTCATTAAATTACTAAGTAAATTCAATTTTG
GTTGATAATCTATATTTAAGAGACTTGGGAACTTAAACTTGTTCTTTTTG
AATTTTATTTACACTTAATATTAGTGTTGTGTAAGAACTTTTTTATTTTG
ATTCGTTCCAGTTCAGTCATAGGATCGGTCCTGTAAGTCCTTGGGAGCGG
TCCTTGAGACTGTCAGTCCTAGCACAATCCCTTTAAATAAAGTTGAATGA
CGTCATCATAGACCGAACCTTATAAGTTGTAGGACGGAATCGGACCAGAC
CGAGACTGAACTAGACGAGACTGAAGTCTTCAGTCCTAAATAAGGATCGA
CACAACACTACTTAATATCTAATTATATTTCTTTAAGTGAATGATAATCC
AACACCTCCCCCATCCACCACAACTACTACAACCACCACTACGACAACTA
CTACAACCACGACGACAACCACAACAACAACAACTACTACTACAACAACC
ACCACGACAACAACAACAACTMCTACMCCAACTMCCACCACGACAACCAC
AACAACAACAACTACTACTACAACAACAACCMCCACGACAACTACTACTA
CTACAACAACAACCACCACGACAACTACTACAACGACAACTACTACAACG
ACAACCACGACAACAACTACTACAACGACAACTACTACAACCACRACAAC
TMCTACTACTACAACGACAACTACTACAACCACRACAACTACTACTACTA
CAACAACCMCCACCACGACAACTACTACAACGACAACCACGACAACTACT
MCTACTACAACAACCACCACAACAACTACTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCAACG
GCGTCAAATAGTGGATGSCTTTCAACACAAGGACTACCCTGCATTTTCCC
ATTCAAATATAAAGGTGTAACTTATAACCAATGTTCAAGTCAAGATTTTG
GTGGTATTTTTTGGTGTGCCACATCAGTTGATGCAGCTGGAAACAACCTA
GGCTATGGTACATGCAGCAGCTCKTGCCCTAGTAAGTGATTCAGATTTTT
TTGTTTAAATTAAAGTCATTTATTTAACATCACAATTATTTTGATTTCAG
TGGAAACAACTATTCCATCCAATAGTAAGATCCAGTTTAAATCCATTTGT
TTACTTTAAAAGGGACTCAATTTATTGTTTGTTTCTTTCAGAATGTGGCA
CAACCGACAATCATGCCTGTATATTCCCATTCACTTATAGTGGAATAACT
TACACAACATGCACCACAAGAGATAACAGTGGAACTCCTTGGTGTGCAAC
AAAAGTTGATGTAAATGCCTATTATGTTGATTATGGAACATGTAACTCAA
TTTGTAATGGTAATTGTATACAAAAATATTTATTTCACTGATTTTACATG
ATTTTTTATTTCTTTTGAAGTTGTGAATTAGGGAAACGGAAACAAAACTT
TAAGTGATCTTCTTGAATCAAATTTATTCTAATATGCTATATAAGTCTTT
ATACAGTATTTACATTTTTTTAAAAAATAAATCAGCA
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