EMLSAT00000007539, EMLSAT00000007539-703386 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007539
Unique NameEMLSAT00000007539-703386
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s434supercontigLSalAtl2s434:427286..429061 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007539 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007539EMLSAG00000007539-690305Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033159EMLSAE00000033159-742087Lepeophtheirus salmonisexon
EMLSAE00000033160EMLSAE00000033160-742088Lepeophtheirus salmonisexon
EMLSAE00000033161EMLSAE00000033161-742089Lepeophtheirus salmonisexon
EMLSAE00000033162EMLSAE00000033162-742090Lepeophtheirus salmonisexon
EMLSAE00000033163EMLSAE00000033163-742091Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777566auto777566Lepeophtheirus salmonispolypeptide
EMLSAP00000007539EMLSAP00000007539Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007539

>EMLSAP00000007539 ID=EMLSAP00000007539|Name=EMLSAP00000007539|organism=Lepeophtheirus salmonis|type=polypeptide|length=325bp
GDFLGRQVSYLLLLLFNHRVKIVTFRFSNDPCSTADNTNGTCYTSEECSS
RGGSSSGNCASGYVALGCGQRSIENCTYFSSPAASQDGRCILTICPCIXX
TLSGPATATDSTGKTPAGKDLTDEQRCLMDTFSVTNPGGSTPPVICGMNN
GEHMYVDSAEACNDLVFNSVSANVRQTWIIKITQYSCDFDNLAPDGCTQY
FFGSKTGTVKTFNFDGGQHLNDQDQRICVRRERSNCQICWSATGDGDFET
SGDKNGASGLAIVRTSCCGYGISGIKEFGFDCVMIPAKAVPFNIRFLSDE
REQFTKEKGKNPNGFKLFYEMFPCT
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mRNA from alignment at LSalAtl2s434:427286..429061+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007539-703386 ID=EMLSAT00000007539-703386|Name=EMLSAT00000007539|organism=Lepeophtheirus salmonis|type=mRNA|length=1776bp|location=Sequence derived from alignment at LSalAtl2s434:427286..429061+ (Lepeophtheirus salmonis)
GGGGATTTTCTCGGTCGTCAGGTATCGTACCTATTATTATTATTATTCAA TCACCGGGTGAAAATAGTAACTTTCAGATTCAGCAACGATCCGTGTTCCA CTGCGGATAACACGAATGGAACTTGTTACACCTCAGAAGAATGTTCAAGC CGAGGGGGTTCCTCTTCTGGAAATTGTGCGTCTGGTTACGGTGTATGTTG CATTTGTAAGTATGGGGCCTTTCTGTTACAAGCTTAAAATTAAAATGGAT CATTTTTTTACAGTCGCTTTAGGATGTGGTCAAAGATCTATTGAAAATTG CACTTATTTCAGCAGTCCTGCTGCATCACAAGATGGTCGATGTATACTCA CTATATGTCCTTGCAGTGACAATATATGTCAACTTAGATTAGATTTTAGT ACWTTNCACACTAAGTGGTCCAGCGACAGCCACCGATTCGACGGGCAAAA CCCCAGCTGGTAAAGATTTAACAGATGAACAAAGGTGTTTGATGGATACT TTTAGCGTTACTAACCCAGGAGGATCCACTCCTCCCGTCATATGTGGAAT GAATAATGGCGAACACAGTAAATATATATCTTGTTAAGTCAGTTCAACTA TTGTTGATTTAAGTGTATGTTGATAGTGCGGAAGCGTGCAATGATTTAGT ATTTAATTCCGTGAGTGCTAATGTACGACAAACATGGATAATTAAAATAA CCCAGTACAGCTGTGATTTCGATAACCTTGCTCCAGATGGTTGTACACAA TATTTCTTTGGAAGTAAAACAGGTACTGTTAAAACATTTAATTTTGATGG GGGTCAACATCTCAACGATCAAGATCAAAGAATCTGCGTGAGAAGAGAAA GGAGTAATTGCCAAATATGTTGGTCTGCTACAGGAGATGGGGATTTTGAA ACATCAGGGGATAAAAATGGTGCAAGTGGATTAGCTATTGTAAGAACGTC CTGCTGTGGTTATGGTATAAGTGGTATTAAAGAGTTTGGATTTGACTGTG TCATGATTCCAGGTGACGTCAAAAAAAACCAATAGTGCACCTATACCAAC GATTGGCGCACATGGGCTTTGTGGCTCCAAGTTTGCTCCAACGGATGGYG CTACTGTTTCGAAAACTATTTGTTGTAAGTAATCTTTTAATTAGTTAAGT ATGATCTTTTGACTTGATTCAAGTATCTTTCTACTTTTTTTAAGCCAAAG CAGTGCCTTTCAATATTAGGTTTTTAAGTGATGAGCGTGAACAGTTTACG AAGGAAAAAGGAAAAAATCCAAATGGTTTCAAATTATTTTATGAAATGTT TCCTTGTACATAGATTGGCATGGCAATAACTATTAATTACTCAGGTGTAA CTTATAATTTGAAGAATAATAAAAAAGTTATTTATGACATTGGTAAACAG TAATGCATTTTCGAAGATATGTATGTATAATGATTTAAAGTTAAGATATC ATGATGAGTAGATAAATCAAAAAAGTTATAGTATTTTATACTTAATATCA GAGTGGGTGTAATGAAACCAACTTCACTAACTGAGATATTATAAGCCTCG AAATTTATATATAACTTTACAATTTTCATGATTTTTCTTCATATTTTTAT CAAACTTCAATTTATTTCTTATTTTCATATACCGTCAATTTTCAATTTTA TAGCAGAAATACCACATTACGAGGCATTTTGGACAAAAAAATCAATAAAA TTAACAAAGCATTGTATTTTAAATACCCAGAACATTTTATAAAATAATTA TTGCAATATTTGCAAAATGAACCAGT
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