EMLSAT00000007541, EMLSAT00000007541-703388 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007541
Unique NameEMLSAT00000007541-703388
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4356supercontigLSalAtl2s4356:4445..6868 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007541 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007541EMLSAG00000007541-690307Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033166EMLSAE00000033166-742094Lepeophtheirus salmonisexon
EMLSAE00000033167EMLSAE00000033167-742095Lepeophtheirus salmonisexon
EMLSAE00000033168EMLSAE00000033168-742096Lepeophtheirus salmonisexon
EMLSAE00000033169EMLSAE00000033169-742097Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768480auto768480Lepeophtheirus salmonispolypeptide
EMLSAP00000007541EMLSAP00000007541Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007541

>EMLSAP00000007541 ID=EMLSAP00000007541|Name=EMLSAP00000007541|organism=Lepeophtheirus salmonis|type=polypeptide|length=523bp
MSGKVDIKYTSLFIDNEFLEAENGATFETIDPSTEEVVAKVAFGSANDMN
KAVNAAKKAFEPNSEWRTMDASMRGKFILTLADLMERDVDILAKLITIDN
GKPIDTSEFEVQFAIKVFRYYAGYADKIHGSTIPVDGNFMSYTRKEPIGV
VGQIIPWNYPLAMISWKWGPALTTGCTMVLKPAEQTPLSALHMASLVKEA
GFPKGVINVVTGDGPQTGAALVKNLDVDKIAFTGSTEVGKLISSSGXDSN
LKRISLELGGKSPVVVMNDCPSLDEAVEICQNAIFTYMGQVCXAGSRVFV
QSGIYDEFVRKSTELAKKRTVGSPWNSKNLHGPQVNQEQMDKILDLIDSG
VKEGAKIXSKNLHGPQVNQEQMDKILDLIDTGVKEGAKIETGGSRXGTKG
XFVEPTXFSSVKDDMRIAKEEIFGPVQSIFKFETLNEVIDRANDTTYGLA
AGIITSDFNTMNKFSSFIRAGTVWINCYNVVSTQTPFGGXXXXXXXXXXX
XXXXXXXXXXXXXXXXPAPNVHR
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mRNA from alignment at LSalAtl2s4356:4445..6868+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007541-703388 ID=EMLSAT00000007541-703388|Name=EMLSAT00000007541|organism=Lepeophtheirus salmonis|type=mRNA|length=2424bp|location=Sequence derived from alignment at LSalAtl2s4356:4445..6868+ (Lepeophtheirus salmonis)
CTTGTGCTCAACTTTCTGATTCACATGACGTTTATTTTTACTACTCGCTC
TCCTTTGCAACAGACAAAAGATAAAATAAATATTTCAGATAGGAAAAATA
TAAACGTTATAAAATCTCCAACTGGAAGGTTCCTGATTAATACTCCTCCT
TGGATTACTTTATAGTTTACAAGAGCTAATAAATATTAGTAATAACATGT
CGGGGAAAGTTGATATAAAGTACACGTCCCTCTTTATCGACAATGAGTTT
CTAGAGGCGGAGAATGGAGCAACTTTTGAGACCATTGATCCATCTACTGA
AGAAGTTGTTGCTAAGGTCGCATTTGGTTCGGCTAATGACATGAATAAGG
TATGTATCGTTAGAGTTGTGACAGTCCTTATTTATTATGTCCAGTTCAGC
CTCATGACTGGTCCTATCAGGCTTAAGACTGTCGGCCTTTCGGTCTGTAC
GTACTAGAACTGATTAAAAAGTGACGTCATCAATGACCAAACTTCATCAG
TTTAAAAACTGATATGTAAGACTGGACTGAGACTTAATTGGACGGGACTG
CAGTCTTCAAGCCCTAAGTAAAGATAGACGCTACAATATGTAATATACAA
TATTGTGAATATTTTGTTATTTTCAAGTCTTAAATTTCTTATTATTTAAC
ATACACGAACTTACAGGCAGTAAATGCCGCTAAAAAAGCATTCGAACCCA
ATTCGGAATGGCGTACAATGGATGCTTCAATGCGTGGAAAGTTCATATTA
ACCTTAGCAGATTTAATGGAAAGGGATGTTGATATTTTAGCTAAATTAAT
TACAATTGACAACGGGAAGCCTATTGACACATCTGAATTTGAAGTACAAT
TTGCCATCAAGGTCTTTCGATACTATGCTGGCTATGCAGATAAAATACAT
GGATCTACCATTCCGGTTGATGGAAATTTTATGAGTTATACACGGAAAGA
ACCCATTGGTGTTGTGGGTCAAATCATCCCTTGGAATTATCCTCTTGCCA
TGATTTCATGGAAGTGGGGTCCAGCTCTTACAACTGGATGCACCATGGTC
CTCAAACCTGCAGAGCAAACACCATTAAGTGCTCTACAYATGGCTTCCCT
CGTTAAAGAAGCTGGATTTCCAAAAGGTGTGATAAACGTTGTAACAGGGG
ATGGACCTCAAACGGGAGCAGCCTTGGTTAAAAATTTGGACGTAGATAAA
ATTGCATTTACWGGCTCAACAGAAGTAGGGAAGCTTATCTCAAGTTCTGG
AAAKGATTCMAATTTAAAGAGAATATCCCTGGAGCTCGGAGGGAAAAGTC
CTGTTGTTGTGATGAATGATTGCCCTTCATTGGATGAGGCTGTAGAAATT
TGCCAGAACGCTATATTTACTTACATGGGACAAGTTTGCWGTGCGGGCTC
AAGGGTCTTTGTTCAATCCGGGATCTACGATGAATTTGTAAGAAAATCAA
CTGAACTTGCCAAAAAGMGAACWGTTGGTTCCCCCTGGAATTCTAAGAAC
TTGCATGGACCTCAGGTATACTTCATAATATTATACTCCAATTAATAACT
ATTTGGTTTGATGTAAAAATTTAGGTGAATCAGGAGCAAATGGACAAAAT
ACTGGATCTCATAGATAGTGGAGTCAAAGAGGGCGCAAAAATTGNTTCTA
AGAACTTGCATGGACCTCAGGTATACTTCATAATATTATACTCCAATTAA
TAACTATTTGGTTTGATGTAAAAATTTAGGTGAATCAGGAGCAAATGGAC
AAAATACTGGATCTCATCGATACTGGAGTCAAAGAGGGCGCAAAAATTGA
GACTGGAGGKTCCAGAGKTGGKACTAAAGGATAMTTTGTTGAGCCAACCG
KATTTTCTAGTGTTAAGGACGATATGCGTATAGCAAAAGAAGAAATATTT
GGCCCAGTCCAATCTATTTTTAAATTCGAGACTCTGAATGAAGTGATTGA
TCGTGCCAATGATACAACCTATGGTTTGGCTGCTGGTATTATAACATCAG
ACTTCAATACCATGAATAAATTCTCTTCGTTTATTCGAGCTGGAACAGTT
TGGATTAACTGCTACAACGTGGTATCCACTCAAACACCCTTTGGAGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTCCAAATGTTCATAGA
TGATGTATGTAATTTATGAAAGTTTTCTGTTAAATTGAAATCTGAATTTA
TGTCAAGCAATTATATTGGTTCTAATAAAAACAATGACAAGTGATAATAT
AATATAGTAATAGCAATATTCTTATAAATAATAGTTTGATAGTAATAAAG
ATAAATGACTTAAAATGGGCCTTACAATAAAACAACGTTCCTAGCATCTA
GGATAAAAAACTGATGGCCCACCC
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