EMLSAT00000007547, EMLSAT00000007547-703394 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007547
Unique NameEMLSAT00000007547-703394
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4367supercontigLSalAtl2s4367:3..663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007547 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007547EMLSAG00000007547-690313Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033194EMLSAE00000033194-742122Lepeophtheirus salmonisexon
EMLSAE00000033195EMLSAE00000033195-742123Lepeophtheirus salmonisexon
EMLSAE00000033196EMLSAE00000033196-742124Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767748auto767748Lepeophtheirus salmonispolypeptide
polypeptide-auto767750auto767750Lepeophtheirus salmonispolypeptide
EMLSAP00000007547EMLSAP00000007547Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007547

>EMLSAP00000007547 ID=EMLSAP00000007547|Name=EMLSAP00000007547|organism=Lepeophtheirus salmonis|type=polypeptide|length=172bp
DHNNDLEVEQFFERVKNEQKGQLDLLVNNAYSGVGIINECMGKPFYECPT
PNMWDXXXXXXXLCTVYATRIMVENRTGLIVNISSGGGLEYLFNVPYGIG
KAACDRMAAXCAVELKNKNVTMVSIWPGPVKTEEITNRVLENHEARNSDK
RMFQSGESTEFTGMAIVELASD
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mRNA from alignment at LSalAtl2s4367:3..663-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007547-703394 ID=EMLSAT00000007547-703394|Name=EMLSAT00000007547|organism=Lepeophtheirus salmonis|type=mRNA|length=661bp|location=Sequence derived from alignment at LSalAtl2s4367:3..663- (Lepeophtheirus salmonis)
GATCACAACAATGACTTGGAAGTGGAACAATTTTTCGAAAGAGTTAAAAA
TGAACAAAAGGGTCAGTTGGACTTGTTAGTAAACAACGCATATTCTGGAG
TTGGGATCATTAATGAATGCATGGGAAAACCGTTTTATGAATGTCCAACT
CCCAATATGTGGGATAANNNNNNNNNNNNNNNNNNTCTTTGTACTGTATA
TGCGACAAGGTAGGCTTATATTATTAGAAAAATTATCTGATTCTCAAAAA
ATTGGACCATACTGATATATGACTGACTGTATTTAAAGGATCATGGTAGA
AAATCGAACTGGCCTAATTGTGAACATCAGCTCTGGGGGTGGACTCGAGT
ATTTATTTAACGTACCTTACGGAATTGGTAAGGCAGCATGTGATAGAATG
GCTGCTGNTTGTGCTGTAGAACTTAAAAATAAGAATGTCACAATGGTCTC
TATTTGGCCAGGTCCGGTGAAAACTGAGGAAATAACAAATAGGGTTTTGG
GTTCGTATACACGCAAGTTAAATAAAATATACATTTAATTTACTAATTAT
ATGTTTCACACTCTAGAAAATCATGAAGCACGGAATAGTGACAAAAGAAT
GTTTCAATCAGGAGAATCAACAGAGTTCACGGGGATGGCGATCGTCGAAT
TAGCATCAGAT
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