EMLSAT00000007616, EMLSAT00000007616-703463 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007616
Unique NameEMLSAT00000007616-703463
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s43supercontigLSalAtl2s43:483846..484965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007616 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007616EMLSAG00000007616-690382Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033507EMLSAE00000033507-742435Lepeophtheirus salmonisexon
EMLSAE00000033508EMLSAE00000033508-742436Lepeophtheirus salmonisexon
EMLSAE00000033509EMLSAE00000033509-742437Lepeophtheirus salmonisexon
EMLSAE00000033510EMLSAE00000033510-742438Lepeophtheirus salmonisexon
EMLSAE00000033511EMLSAE00000033511-742439Lepeophtheirus salmonisexon
EMLSAE00000033512EMLSAE00000033512-742440Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778058auto778058Lepeophtheirus salmonispolypeptide
EMLSAP00000007616EMLSAP00000007616Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007616

>EMLSAP00000007616 ID=EMLSAP00000007616|Name=EMLSAP00000007616|organism=Lepeophtheirus salmonis|type=polypeptide|length=264bp
MSFVQASSQKSVQKASQQKLICLIDSYPSRFPKQIDIITKTWAKRCDYAY
IISTVANETKGFNVIEYKGEDSDHWGKVMVSLDYVYNNYIDKIDWVLKTS
DEVFTIPENLHYFINSKKLKSSDPLWFGSEYLSPSKSVFMSREGYVMSKA
AVVKLMTEGKKLPKDKCKTQEHQLNEEDELAKCLKALDVKTVDTRDQLGR
HRFISYDLGEMIIPVSDPNKREKRLRFPYQNGPNCCAQDPILLKGGSIRF
FDFMLYELHYAGEK
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mRNA from alignment at LSalAtl2s43:483846..484965-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007616-703463 ID=EMLSAT00000007616-703463|Name=EMLSAT00000007616|organism=Lepeophtheirus salmonis|type=mRNA|length=1120bp|location=Sequence derived from alignment at LSalAtl2s43:483846..484965- (Lepeophtheirus salmonis)
ATGAGTTTTGTGCAGGCTTCATCCCAGAAATCAGTTCAAAAGGCTTCGCA
ACAAAAACTTATCTGTCTCATCGATAGCTATCCTAGCAGATTTCCCAAAC
AGATAGATATAATAACGAAAACATGGGCTAAACGCTGTGACTATGCTTAT
ATTATATCCACTGTGGCCAATGAGAGTAAGTACATCCTTTAAAATAATAT
TTCTACTCATTTAGAAAGATCTTTTTAATTATAGCCAAAGGGTTCAATGT
CATTGAGTATAAGGGAGAGGATTCGGATCACTGGGGGAAAGTGATGGTAT
CCCTGGACTATGTGTACAATAATTATATGTAGGTCTCAATTTTATAGAAA
ATGCTCATAATAGCACCATTTATTATGTTCCATATAGAGATAAAATCGAC
TGGGTATTGAAGACCTCAGATGAAGTTTTTACCATCCCAGAAAATTTGCA
CTACTTTATCAACTCGAAGAAGTTAAAATCCTCTGATCCTCTTTGGTTTG
GCTCCGAGTACTTATCACCATCCAAAAGTGTTTTTATGAGTAGAGAAGGT
AGCTTTTCGTTCTTTCTTTATTTTTAGCCTAAATAAGATTACTTTTGATT
GGAGTAGAGCTTTTTCAGGCTACGTCATGAGTAAGGCAGCTGTAGTCAAA
TTGATGACTGAAGGAAAAAAACTTCCTAAAGATAAGTGCAAAACTCAAGA
GCACCAATTGAATGAGGAAGACGAGCTTGCAAAGTGTTTGAAAGCTCTTG
ATGTCAAAACAGGTAAATTTTTGAATACCCCACTCTTTCTCATTATGATT
GCTATAACTGATTGTTTTATTTATTTCCAAGTGGATACTAGGGATCAATT
AGGTCGTCATAGATTCATATCTTATGACCTTGGAGAAATGATTATTCCTG
TTTCTGATCCAAATAAGAGAGAAAAGAGATTAAGATTCCCATATCAGAAT
GTAAGGATAAAAAATATCATAATTATAATTCATTTATATTTCTTCATTTA
CCACTCATTCCTTTCCAGGGCCCAAATTGTTGCGCACAGGATCCAATATT
ACTGAAAGGAGGCAGTATTCGATTCTTCGATTTTATGTTATATGAATTGC
ATTATGCTGGAGAAAAATAA
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