EMLSAT00000007624, EMLSAT00000007624-703471 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007624
Unique NameEMLSAT00000007624-703471
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s43supercontigLSalAtl2s43:868136..869980 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007624 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007624EMLSAG00000007624-690390Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033541EMLSAE00000033541-742469Lepeophtheirus salmonisexon
EMLSAE00000033542EMLSAE00000033542-742470Lepeophtheirus salmonisexon
EMLSAE00000033543EMLSAE00000033543-742471Lepeophtheirus salmonisexon
EMLSAE00000033544EMLSAE00000033544-742472Lepeophtheirus salmonisexon
EMLSAE00000033545EMLSAE00000033545-742473Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779948auto779948Lepeophtheirus salmonispolypeptide
EMLSAP00000007624EMLSAP00000007624Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007624

>EMLSAP00000007624 ID=EMLSAP00000007624|Name=EMLSAP00000007624|organism=Lepeophtheirus salmonis|type=polypeptide|length=339bp
MFLSSFHFLALTIIGVYTRGKSVIIVTQINNRKVQFSYVDETLELKHPEC
RINYDKYDKQALASNRNMAQGEKWPQREVPYVIRSTFTSSETNVIKSAIA
EVESKTCLKWIPRTNQINYVDINHDRAGCFAALGYNRNRGRHILNLEKFN
GVTNCVSKGVCIHEMLHILGFAHEHTRPDRDQYVKVHWERITTNTISNFF
RAIDIKQTIIPPVCEFTPGKTTYDDCYSGFKTNTFGISYDYGSIMHYPLT
DFSIAGEPTMDILKTVPQGVTIGNRISMTDLDAAKVKARYECHKSLEETT
TRKPSVACFDNFSNCPDFAGLCGENDEITKNCHFTCRTC
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mRNA from alignment at LSalAtl2s43:868136..869980-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007624-703471 ID=EMLSAT00000007624-703471|Name=EMLSAT00000007624|organism=Lepeophtheirus salmonis|type=mRNA|length=1845bp|location=Sequence derived from alignment at LSalAtl2s43:868136..869980- (Lepeophtheirus salmonis)
ATGTTCTTATCCAGTTTTCATTTCCTTGCTTTGACGATCATTGGCGTATA TACCAGAGGTAAGTCAGTAATCATCGTAACCCAAATTAATAATCGAAAGG TTCAATTTTCATATGTCGATGAAACTTTAGAACTTAAGCATCCGGAATGT CGTATAAACTATGACAAATACGACAAACAAGCWTTGGCATCCAATAGAAA CATGGCACAAGGTGAAAAATGGCCGCAAAGAGAAGTGCCCTATGTAATAA GATCTACTTTCACTTCGAGTGAGACAAATGTGATCAAATCTGCAATAGCT GAAGTCGAAAGTAAGACATGTTTGAAATGGATTCCCCGGACAAATCAAAT CAATTATGTTGATATTAACCATGATAGGGCGGGATGTTTTGCTGCATTAG GCTATAATAGAAATCGTGGGCGTCATATTTTGAATTTGGAAAAGTTTAAT GGTGTTACGAATTGTGTTGTGAGTCATTTTAATCATGAAAAAGAAATTGT CTCTAATTTTTTTTTTTTTAGTCAAAGGGTGTGTGTATTCACGAAATGCT TCATATCTTGGGGTTTGCTCATGAACATACAAGGCCTGATAGAGATCAAT ACGTTAAAGTCCACTGGGAGCGGATTACAACAAATACCATATCCAATTTT TTCCGAGCAATTGACATTAAACAAACAATTATTCCCCCTGTGTGCGAATT CACTCCGGGGAAAACAACATATGATGATTGCTACTCTGGATTCAAAACAA ACACTTTTGGCATTTCATATGACTATGGCTCCATAATGCACTATCCCTTA ACAGAGTATGGCACAAATAAATATTGGATATTTTCTTGATTGAATATTAA CAATTAAATTAACTAATAAAAAAATATCATTTAGCTTCTCCATCGCAGGY GAACCTACAATGGACATCTTAAAAACTGTTCCTCAAGGAGTCACCATTGG TAATAGGATTTCCATGACAGATTTGGACGCTGCTAAAGTGAAAGCACGGT ATGAATGCCATAAAAGTCTTGAGGAAACAACAACTAGGAAACCAAGCGTT GGTTCGTCATAAAAATAAAAGTTCATTTAAAAAGAATAGTTGATTATATT TGTCCTATTGTAATTTATAGAATGAGAGATATATATGTTGAGTGTCCGAC GCTAAAATCCTTCTGCAATAACACATTTATTAAAGAAGGGTGTCCAGTGT CTTGTGGGTCTTGCGAAGGTAATTAAAATTATTATGATTATTTATTTATT TTTGACAGCATCAAGGAATTATCTCCTATGGATAATCCCAAATTAAACAA AAAGCAATAAATACAATATCAGTTCTTTCTTTTGAAAAAAATAAAAACAA GAATTCTTTAATACTTCCAAAATAAATGCACTAAACGTTATCGTGAAAAT TTGATATAGGCCATTGTAATTTTGCATTCTATGAAAATTCATGTTATTTG AAGTGCAATGTAAATAACACACAGCTAAAATTATTAATATTAGCTGTTTA ACTAAATTCCATTTTCAATATTGGCGAGGAAATACATGTTATTTTATTAT CAAATAGCAAGTCTCTTGTCAAAATAAATACAAAGACTTTGTAATATTAA TTATGGTTTTTTTGATTCTTCCCGCAATCCCGTAAAACAGAATATTATTG ATTTTCTCTTAATGTTGTTTCCTCTAGCATGCTTTGACAATTTCTCCAAC TGCCCTGATTTTGCTGGTCTCTGTGGAGAAAATGATGAAATAACAAAAAA CTGTCATTTCACATGTAGAACTTGTAAGAAATTATAATTCTGTTTTTGCT TTAATACAATTTTATTAATATAAAATCAATTTTTCCTAAGGTTGA
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