EMLSAT00000007692, EMLSAT00000007692-703539 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007692
Unique NameEMLSAT00000007692-703539
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s447supercontigLSalAtl2s447:512720..516392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007692 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007692EMLSAG00000007692-690458Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033930EMLSAE00000033930-742858Lepeophtheirus salmonisexon
EMLSAE00000033931EMLSAE00000033931-742859Lepeophtheirus salmonisexon
EMLSAE00000033932EMLSAE00000033932-742860Lepeophtheirus salmonisexon
EMLSAE00000033933EMLSAE00000033933-742861Lepeophtheirus salmonisexon
EMLSAE00000033934EMLSAE00000033934-742862Lepeophtheirus salmonisexon
EMLSAE00000033935EMLSAE00000033935-742863Lepeophtheirus salmonisexon
EMLSAE00000033936EMLSAE00000033936-742864Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778292auto778292Lepeophtheirus salmonispolypeptide
EMLSAP00000007692EMLSAP00000007692Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007692

>EMLSAP00000007692 ID=EMLSAP00000007692|Name=EMLSAP00000007692|organism=Lepeophtheirus salmonis|type=polypeptide|length=1065bp
MLTTFVRILLVLVFGSLGLSTQTAWVDSPPKYDCPKRSIFPCDCMKGSDE
GVYLECSNTNIASLSVGLQQVKTLIHTLIISNCNIEKLYGSLFKLLTIRI
LKIHDTPIKDISDGTFDQLSSSLEELHIQNSLLTRLSPSIKNLTSLKILF
IENSQISYLPEGVLNGMNSLEELSISHGKIQSIGNKVFNDVRRLKKLSLF
KNQLSSLPRDAFKSQGQLEFLDISNNQFSKLEAHYFPKLRKLLWLNISHN
EIPRIQSRVFARNSLLRVLHLNANKIDRLDTNSLRGMRFLRRLYLSDNFI
PSVGRGAFRAVSRIGTVDLARNNLTKVDYQLFSDLRFIDTISLQENQIKN
IDKEAFSNLYLTKINISHNQLPFLSSGLFKNCENMTFLDLSHNQIAHISE
DAFNENTYATEFLLQYNKLTSMSGVPLASQKGLKFLNMSHNAIVDIPRNT
FPKLYELFRLDFSYNNISIIGKSIFSSLLTLRHIDLSHNSLTKLDSGMFG
KVPTLLDLDLSYNKLNQVRRSVFGGLSSIRFVKLHHNQLQEIPSPPISLN
TMDCSYNNIKEIKGRQPWPVMNSLLELNLDYNQLGNSIKAGRFDGLIVLK
SLGLRGNNITKPPWEALRSLISLNYLDLDYNLIQNLTKNAFGYLPVLFEL
GLSNNLIHNVSVEAFDGLLQLQKLDLSQNNITYIPPGAFKGMSALYDINI
SFNKIQHLQNRTHGLFEDTLSLRKIELSHNEISFITPKMFPESPWAPYRV
KHIDLSYNLIHVLTKSILKGTKYLDYLNISNNRLNDVRKGILTNLTSLKI
LDISGNSLKEDIFNNGSFGNMPNLTVFKLHNNKFETLPVKALLLQSNLKV
LDIRNNKIKEYYTEFTPRIKKGMELYYEGNPLMCDCSLRPIAYWLKSVGR
IKGRSKPWEDAICESPPYLSGNSVASVLEERLVCADSLDALKFKLNPDIK
FRQVKEDRGFIKLSWYVNTNEDVGDFRLEIRSSDFPPQTLAREDVDYGSR
YTIIRNEFNEPSRKLKICLLAKNSAGRIRRWRQDQCQKISISIKVEPFCF
AFLLMLSSLLIYNIL
back to top

mRNA from alignment at LSalAtl2s447:512720..516392+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007692-703539 ID=EMLSAT00000007692-703539|Name=EMLSAT00000007692|organism=Lepeophtheirus salmonis|type=mRNA|length=3673bp|location=Sequence derived from alignment at LSalAtl2s447:512720..516392+ (Lepeophtheirus salmonis)
AAGAATGAAGTTAAACTGTGCAAAATGCTTACAACATTTGTAAGAATACT TTTGGTACTTGTCTTTGGGTCTCTGGGCTTGAGTACCCAAACAGCATGGG TGGACTCCCCTCCCAAATATGACTGTCCCAAAAGATCCATTTTCCCTTGT GACTGTATGAAAGGTAGTGATGAGGGGGTTTACTTGGAATGTTCAAACAC CAATATTGCCTCATTGTCCGTTGGGCTACAACAGGTGCGTTTCCTCTTTT ATCCACAAAGCGTACAAGTACATTTTTTATTTGCGTCCTTTCAAGGTCAA GACCCTCATACATACATTGATCATCAGCAATTGTAATATTGAGAAACTAT ACGGGAGCCTCTTCAAGCTTCTCACTATTCGCATCCTTAAAATCCATGAT ACTCCTATAAAAGATATTAGTGATGGTACCTTTGATCAACTCTCTTCAAG TCTAGAAGAGCTTCACATTCAAAACAGTCTCCTTACGCGCCTATCTCCCT CTATAAAAAATCTTACATCCCTAAAAATACTCTTCATCGAAAATTCTCAA ATATCGTATTTGCCGGAAGGAGTTCTGAACGGAATGAATTCTCTAGAGGA GCTGAGTATCTCCCATGGAAAGATCCAATCTATTGGAAATAAAGTTTTTA ATGATGTAAGGCGACTCAAAAAATTGAGCCTCTTCAAAAATCAGCTCAGT TCTCTACCCCGTGACGCCTTCAAATCTCAGGGTCAATTGGAGTTTCTGGA CATTTCAAACAATCAATTTAGCAAATTGGAGGCCCATTATTTCCCCAAAT TGCGGAAACTCCTTTGGCTAAACATTTCTCATAACGAAATTCCCCGTATT CAGTCTCGAGTCTTTGCAAGAAACTCATTACTTCGAGTACTTCATTTAAA TGCAAATAAAATAGATCGTTTGGATACGAATTCTCTTCGAGGAATGAGAT TTCTTAGACGGCTTTATTTGTCAGACAATTTTATTCCATCTGTAGGAAGA GGAGCTTTTAGAGCAGTCTCTCGAATTGGTACTGTGGATTTGGCACGGAA TAATTTGACCAAAGTAGACTATCAACTCTTCTCAGATCTGAGATTCATTG ACACAATCAGTCTTCAAGAGAATCAAATAAAAAACATTGACAAAGAAGCA TTTTCAAATTTGTATCTCACAAAAATCAACATAAGCCACAATCAGCTCCC TTTCCTTAGCTCCGGGCTATTTAAAAACTGTGAAAACATGACATTTCTTG ATTTGTCTCATAATCAGATTGCTCACATTTCGGAAGACGCATTCAATGAA AATACTTATGCCACAGAGTTTCTTTTACAGTATAACAAATTAACTTCCAT GTCTGGAGTACCTCTCGCTTCACAAAAAGGACTTAAATTCCTTAACATGA GTCATAACGCCATCGTTGATATTCCCAGAAATACATTTCCTAAGCTATAC GAACTATTCCGCCTCGACTTCTCTTATAACAACATATCCATCATTGGTAA ATCCATTTTCAGCTCACTCCTCACCCTACGACATATCGATTTGTCACACA ACTCTTTAACGAAGTTGGACTCAGGGATGTTTGGAAAGGTCCCTACTCTA CTAGACCTGGATTTAAGTTACAATAAACTAAACCAAGTGAGGAGAAGTGT GTTTGGAGGGCTTTCGTCGATACGCTTTGTCAAATTGCATCACAATCAAT TACAGGAAATTCCATCTCCTCCTATCTCTTTGAACACCATGGACTGTTCC TACAATAATATCAAGGAGATAAAAGGGAGGCAGGTAATTATCCTTGTGAA TCGTTCTTTATTGATCCTTGCTTATATTAATACTTTCTTCATTCAGCCTT GGCCAGTCATGAACTCCCTTCTAGAACTCAATTTGGATTATAATCAGTTG GGAAATTCTATCAAAGCTGGTCGTTTTGATGGTTTAATTGTTTTAAAATC ACTTGGTCTAAGAGGAAATAACATAACCAAACCCCCATGGGAAGCATTAA GGTCTCTTATAAGTCTTAATTATTTAGATCTAGATTATAACCTTATTCAA AATCTAACAAAAAATGCATTTGGATATCTCCCCGTTCTATTTGAACTGGG TCTTTCAAATAATTTGATACACAATGTATCGGTTGAGGCATTTGATGGTC TCTTGCAACTCCAAAAACTAGACTTGAGTCAAAATAATATTACCTACATT CCTCCAGGCGCATTCAAAGGTTTGTAGTATGAAAAAAAATATATATATAT TATTATTTAAAACATTTGAAATTTGTATTCTTGCAGGAATGTCTGCACTC TATGACATAAATATCTCGTTCAATAAAATACAACATCTTCAAAATCGAAC ACATGGACTCTTTGAAGACACTCTCTCTCTTCGTAAAATTGAATTGAGTC ATAATGAAATCTCCTTCATCACACCAAAGATGTTTCCTGAGAGTCCATGG GCACCCTATCGTGTTAAGCATATTGATTTGTCTTACAATTTGATACATGT ATTAACAAAGTCTATCCTGAAAGGAACAAAGTATTTGGATTATCTAAACA TCTCCAACAATAGACTTAATGATGTTCGAAAAGGTGAATATACTGATATA TATATATGACTATAAAACTTCATAGGGTACACTATTCTAATTTTAGGGAT ACTCACTAATCTTACAAGTTTAAAGATCTTGGATATTTCCGGAAATAGTC TGAAGGAGGACATTTTCAATAATGGGAGTTTTGGAAACATGCCAAATCTT ACTGTATTCAAACTCCATAACAACAAATTTGAAACCCTTCCTGTAAAAGC TCTTCTACTTCAAAGCAATTTGAAAGTCTTGGATATCAGGAATAATAAAA TAAAAGAATACTACACTGAGTTCACTCCTCGGATTAAAAAAGGCATGGAA CTCTACTATGAAGGTAATGACAAATCACACAAATCTTATATGCCTTTCAA TATCACATCCTTATCTAGGAAATCCACTAATGTGTGACTGTTCACTCCGT CCAATTGCATACTGGCTCAAATCTGTTGGGAGAATTAAAGGAAGATCTAA ACCATGGGAGGATGCTATTTGTGAATCACCACCATATTTATCTGGTAATT CAGTAGCTTCCGTCCTCGAAGAAAGGCTTGTTTGCGCCGACTCCCTTGAT GCTCTCAAATTCAAGCTCAATCCGGATATTAAATTCCGACAAGTGAAAGA GTAAGTATTCAGGACGAATGAGGAATATCGACAACATACTGACTGAATTA TATTCTAGGGATAGAGGATTCATCAAGTTGTCTTGGTATGTAAATACAAA TGAAGATGTTGGAGATTTCCGCCTTGAGATACGCAGTTCTGATTTTCCAC CTCAAACTCTAGCGAGAGAAGACGTGGACTACGGCTCCCGCTATACCATT ATAAGAAATGAATTCAATGAACCGTCACGAAAATTAAAAATTTGTCTGTT AGCTAAAAATTCCGCCGGAAGAATCCGAAGATGGCGTCAGGATCAATGTC AAAAAATATCAATTTCCATTAAAGTAGAGCCATTTTGTTTTGCTTTTCTG CTAATGCTGTCCAGTTTACTAATTTACAATATTTTATAGAGCAATCAATT GGGATAATGCAATACTTAAGGCTGTGATTATAATACGCTTATCTTAAGAC AAATTATTTATTATATTCAATAG
back to top
Add to Basket