EMLSAT00000007720, EMLSAT00000007720-703567 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007720
Unique NameEMLSAT00000007720-703567
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s44supercontigLSalAtl2s44:1523368..1524572 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007720 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007720EMLSAG00000007720-690486Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034061EMLSAE00000034061-742989Lepeophtheirus salmonisexon
EMLSAE00000034062EMLSAE00000034062-742990Lepeophtheirus salmonisexon
EMLSAE00000034063EMLSAE00000034063-742991Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780805auto780805Lepeophtheirus salmonispolypeptide
EMLSAP00000007720EMLSAP00000007720Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007720

>EMLSAP00000007720 ID=EMLSAP00000007720|Name=EMLSAP00000007720|organism=Lepeophtheirus salmonis|type=polypeptide|length=254bp
MRFNDGSYKRDLEHELLNLTPRKRLNTDAVPSLLLPTPTVPKPEEGNEEA
EQTNGNQIKELEQKNKDIGIHTEHSLFLENTDNLKAELKKTKADLWKQKV
KVNILTKKLERLEAKENKHSKIVRTLHDSLEGEIRVNCDGIEIEKEYDIY
RIEDEEEKESVTRQITGDILDITIGEESCSEFEFTFDIPHEVHVDFAINY
PLDQFKKWDLNIQGLSYGSSFIAHKMKLLYPDLGKKTSDIYLNEHGYIIC
LEED
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mRNA from alignment at LSalAtl2s44:1523368..1524572-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007720-703567 ID=EMLSAT00000007720-703567|Name=EMLSAT00000007720|organism=Lepeophtheirus salmonis|type=mRNA|length=1205bp|location=Sequence derived from alignment at LSalAtl2s44:1523368..1524572- (Lepeophtheirus salmonis)
ATGCGCTTTAATGATGGAAGCTACAAGAGGGACCTGGAACATGAGCTTCT
TAATTTGACTCCCAGAAAGAGGCTAAACACAGATGCGGTACCAAGTCTGC
TACTTCCTACTCCCACTGTTCCTAAGCCTGAGGTTCAATGTGATAAAAAG
TTCCCAAAAAGTTACATGAATCAACATTCTCTCAAACTCNNNNCACTGTT
CCTAAGCCTGAGGTTCAATGTGATAAAAAGTTCCCAAAAAGTTACATGAA
TCAACATTCTCTCAAACTCCCCCCAGCAGTGTCGATAATCAAGGTGAAGA
CCAAGTAGATTTTGTTTCACCTCGTTCCAGGAGGGAAATGAGGAGGCAGA
ACAAACAAATGGTAACCAAATAAAGGAACTGGAGCAAAAGAATAAGGATA
TTGGGATACATACAGAACATTCCCTTTTTCTGGAAAATACTGATAATCTC
AAAGCAGAATTAAAGAAAACGAAAGCAGATTTATGGAAACAAAAAGTCAA
GGTAAACATTCTCACAAAGAAACTCGAGCGACTTGAAGCGAAGGAAAATA
AACACTCCAAAATTGTAAGGACTCTTCATGATTCATTGGAAGGGGAAATA
AGAGTGAATTGCGATGGTATAGAGGTATACAAGTTTCAATCAAATCAACT
CMAGCTTTGTACCATGATTTGATTTCTAATGGTCCTCTTTCTTTCATTTT
GATGTCCAGAACTAATCAAGATTGCCTTGAAATTTTTTTTTTACCCGTTT
GAGAAGTGCTGGTGGTGATAATGCTCKCCTTGGAGCCGTTGGAGCAATGA
AAAGGATGAGAATTCTGGAAATTGGGAAAAAAATGTGAAACTTTGGTAAA
CAATCCGGCTGTTCAGATTGAAAAAGAATATGACATTTATAGAATTGAGG
ATGAAGAGGAAAAAGAATCTGTAACAAGGCAGATCACTGGAGACATCTTA
GATATCACAATTGGTGAAGAAAGCTGTTCAGAATTTGAATTTACGTTTGA
TATCCCTCATGAAGTTCATGTGGATTTTGCAATAAACTATCCACTTGATC
AGTTCAAAAAATGGGATCTCAACATTCAGGGGCTCAGTTATGGATCTAGT
TTTATTGCCCATAAGATGAAACTTTTATATCCGGATTTGGGGAAGAAGAC
AAGTGACATATATTTGAATGAACATGGATATATCATTTGTCTAGAGGAGG
ACTGA
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