EMLSAT00000007754, EMLSAT00000007754-703601 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007754
Unique NameEMLSAT00000007754-703601
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s452supercontigLSalAtl2s452:621419..622662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007754 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007754EMLSAG00000007754-690520Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034235EMLSAE00000034235-743163Lepeophtheirus salmonisexon
EMLSAE00000034236EMLSAE00000034236-743164Lepeophtheirus salmonisexon
EMLSAE00000034237EMLSAE00000034237-743165Lepeophtheirus salmonisexon
EMLSAE00000034238EMLSAE00000034238-743166Lepeophtheirus salmonisexon
EMLSAE00000034239EMLSAE00000034239-743167Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778949auto778949Lepeophtheirus salmonispolypeptide
EMLSAP00000007754EMLSAP00000007754Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007754

>EMLSAP00000007754 ID=EMLSAP00000007754|Name=EMLSAP00000007754|organism=Lepeophtheirus salmonis|type=polypeptide|length=349bp
MNSSIIVGEMKMKRGWVWKGTTDLVNLKRSFRIGLLYLLLGCSFKKTKAR
IMSRPKDRRANIKGIFDRIHDKLAENRNFEYKLVFSKRYEEEYGQLRILF
TSNPESETWSGLIGLLIKGNIDMVASDLTTILEHEEVIDFVSPNYYQNGY
AIIFRKPVREWSFFKFMEVLKSEVWVSILAFLLWFLEKYSPFSARNNLVK
YNEPIRVFDLRESFWFAKTSFTPLGGGQDLFHLFVVLIFATFTANLAAYL
IVERMKTSVKNLDELVQQSEINFSLMRNSTIKGYFLNLAKAEDDIYMAWK
GISLNSKKYSYSQVWNYPVKQKFQQLLEAIEGAGTVSSEDEGFKRALKD
back to top

mRNA from alignment at LSalAtl2s452:621419..622662-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007754-703601 ID=EMLSAT00000007754-703601|Name=EMLSAT00000007754|organism=Lepeophtheirus salmonis|type=mRNA|length=1244bp|location=Sequence derived from alignment at LSalAtl2s452:621419..622662- (Lepeophtheirus salmonis)
ATGAATAGTTCTATCATAGTAGGTGAAATGAAAATGAAGAGAGGTTGGGT
TTGGAAGGGCACAACAGACTTGGTGAATCTAAAGAGGAGTTTTAGAATTG
GGTTATTATATCTCCTCCTTGGCTGTTCTTTTAAAAAGACAAAAGCGAGA
ATTATGTCCAGGTATGAATTATAAGATTTATTAAAAATTTCCTCAACTTA
TTATCATTCCTTGCAAGGCCCAAAGACAGGAGGGCAAATATTAAAGGTAT
ATTTGATAGAATTCATGACAAATTGGCAGAAAATAGGAATTTTGAGTACA
AATTGGTTTTCTCAAAGAGGTATGAAGAAGAGTATGGACAATTACGTATA
TTATTTACATCGTATTAATTGCAATTATTTAATTGAAGTAACCCAGAGTC
TGAGACATGGAGTGGACTTATTGGCCTCTTAATCAAGGGAAATATAGATA
TGGTCGCTTCAGATCTAACAACAATCCTGGAACATGAGGAAGTAATTGAC
TTTGTTTCTCCTAATTACTATCAAAACGGATACGCCATTATTTTTCGGAA
GCCTGTTCGAGAGTGGTCCTTTTTTAAGTTTATGGAAGTTCTAAAAAGTG
AAGTATGGGTCTCTATTCTAGGTGGTCTTATTTAAACAGCGTTTCTCCTT
TGGTTCCTTGAAAAATACTCCCCCTTTTCTGCTCGAAACAATTTGGTCAA
ATACAATGAGCCTATACGAGTATTTGATCTTAGAGAATCCTTTTGGTTTG
CAAAAACCTCATTTACACCTCTTGGAGGAGGTCAGGATTTGTTTCATGTA
TGTATGTATCTATGTCAAAACTTAACTTGAATTTAATCAGGAGATCCACC
AAAAAATATATCCGGACAAATTCAATCATCTACCTATTAGCTCTTTGTCG
TTCTAATCTTTGCAACTTTTACTGCAAATCTAGCAGCTTATTTAATTGTT
GAAAGAATGAAAACATCAGTCAAAAATTTGGACGAACTTGTACAGCAATC
CGAAATTAACTTTTCTCTAATGAGGAACTCAACCATAAAGGGTTATTTTT
TGAATTTGGCAAAGGCTGAGGATGATATTTATATGGCATGGAAGGGCATT
TCCTTGAACAGTAAAAAATATAGTTATTCACAAGTTTGGAACTATCCAGT
GAAGCAAAAATTTCAACAACTTTTAGAAGCAATAGAGGGAGCTGGTACAG
TTAGTAGCGAGGATGAAGGATTTAAAAGGGCTTTAAAGGATTAG
back to top
Add to Basket