EMLSAT00000007768, EMLSAT00000007768-703615 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007768
Unique NameEMLSAT00000007768-703615
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s453supercontigLSalAtl2s453:563174..567050 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007768 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007768EMLSAG00000007768-690534Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034314EMLSAE00000034314-743242Lepeophtheirus salmonisexon
EMLSAE00000034315EMLSAE00000034315-743243Lepeophtheirus salmonisexon
EMLSAE00000034316EMLSAE00000034316-743244Lepeophtheirus salmonisexon
EMLSAE00000034317EMLSAE00000034317-743245Lepeophtheirus salmonisexon
EMLSAE00000034318EMLSAE00000034318-743246Lepeophtheirus salmonisexon
EMLSAE00000034319EMLSAE00000034319-743247Lepeophtheirus salmonisexon
EMLSAE00000034320EMLSAE00000034320-743248Lepeophtheirus salmonisexon
EMLSAE00000034321EMLSAE00000034321-743249Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778608auto778608Lepeophtheirus salmonispolypeptide
EMLSAP00000007768EMLSAP00000007768Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007768

>EMLSAP00000007768 ID=EMLSAP00000007768|Name=EMLSAP00000007768|organism=Lepeophtheirus salmonis|type=polypeptide|length=816bp
MNVFRVNCVVTRELIPFLKEPVASNPEGKMGCKKAVVVQMMVEIMLIVVM
SALNIVSIELEPAGILVMSMHPGWVETDKGGPNGMITVDECVSTMVKTIS
QLGEKDNVKNLIINSKNNTTTMKKILIGGGKMTSWRTPAEMRRSHAQKGR
GRDEFSCNQVEDTSDEEMSPEDQEILRRNIVKQRIQYFDRQTSKQKSIDS
GKKIFINFHNGERKYPMVADKPSFNSYNRRXTDPGSEENEEEENTDFGSS
QKVAKIAREIMTSEEAYVNNLKLLNVDFRAFVSKEIDDAIPPCELNKILS
YFPELQLLNSDLLNDFTSRIRNWDSNPKIADIMVIKGKFLLIYASYIKEF
PRNSQFYQECLKKYPKFRELVLAFQLKKECRNLKIEHLMLEPIQRLPRYK
LLFERYVKNLPVGDPDYEVSLEALEIILKIADKANTELKEYDEFKKMLNL
QSRVNESDLIQPDRELFKEGELLKISRNSVDPRYIVLLSDILLYTXSYSI
LAGEPANTNLRIHYKIPLIKLKVDDLADEIDAEETDFQIISSVRSFVLRA
NSLEEKIEWMKAINDAATSLRTKRSTFDLQKSKEIPEEEEKEIILGETAP
VWIPDKKVSMCQKCAIEFSVLTRRHHCRGCGIVTCFYCSDNRAPLKYLNY
KSDRVCDECFDSIKEEYYYQDAKANSQYLSLFRKREEHKSGSLRTVPNRL
KMKANAEGAXAAGYLRKRVVKSGKWKKSWFVLKDNVLYAYKASSDTVAID
TFPVLGLEVEVISEKIEDLNNEPNGSSVVFQLIHAGLQKYSLCFKTENEQ
QLQKWVKALQEASTLS
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mRNA from alignment at LSalAtl2s453:563174..567050-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007768-703615 ID=EMLSAT00000007768-703615|Name=EMLSAT00000007768|organism=Lepeophtheirus salmonis|type=mRNA|length=3877bp|location=Sequence derived from alignment at LSalAtl2s453:563174..567050- (Lepeophtheirus salmonis)
ATGAATGTGTTTAGAGTTAATTGTGTTGTCACAAGAGAATTAATTCCTTT TTTGAAAGAGCCTGTTGCTTCAAATCCCGAAGGAAAAATGGGTTGCAAAA AAGCTGTGGTTGTACAAATGAGTACAGCAGTTGCTTCTATTGCTGAAAAC GCTAGTGGTGGAAATTATGCTTATCGTCGTTATGAGCGCTTTAAATATGT CAATGAAAAGTGTGTCGATTGAATTAGAACCTGCAGGGATTCTAGTCATG TCAATGCATCCTGGATGGGTTGAAACAGATAAGGGAGGTCCTAATGGTAT GATAACTGTAGATGAATGTGTTTCAACCATGGTTAAGACGATTAGTCAAC TTGGAGAGAAAGATAATGGTAGTTTTCTTAGATACAACAATACTTCTATC CCTTGGTAATTTTTCCTCTATATTACTGTAAGCATTTCTTAAAAATGGCA ATTCAATGAATAAAGTACCTACATGTTGCTTATCAATCATCAAAACATTG TCTATCTTATTTATCATTATTTGATATAGATTATAATAATAATTATTTCA CAAAAGTGAAAATATAAACATTTTCTAATTTCTTAGAATTATATAAATTC CCCTTCCATGCGATAAAGCTTCTCATTAAACAGAATGAATATCTGAAAAA TAAATGACAGAAAATATCAAGCCCACAAGATGAGGATAATTTCTATTCAT ATGATGAGGCATTATTGTCTTTTAAAGAGGACTTACATTTGTATTATGTA TGTAACACATTATTGTCAGACATTCAAATATAAGTCTTTACTCTGCTACT CTGTATAGCAAGCTCCTTATTCCCCCTTTATCTACTTCCAATTAAGCATT AGTGCATAGAAACTGATAATAATTAATATGAATTGTTTTTTTCTCTTGTA TTCCGWGAGCATTGTTCATATTATATTAGTGTCATACTAAAGAAGAAAAC AAAATTGAGTTGCTAATCATATAATATAATATATATATAATATTCTGTAT TCAAGTGAAAAACCTAATTATAAATTCAAAGAACAATACTACTACTATGA AGAAAATACTTATTGGTGGGGGGAAAATGACATCTTGGAGGACTCCCGCA GAGATGAGACGTTCGCATGCGCAGAAGGGTAGGGGTAGGGATGAGTTTTC TTGTAACCAAGTGGAAGATACTTCAGATGAAGAAATGTCTCCAGAGGATC AGGAGATCCTTCGTAGAAACATTGTGAAACAAAGGATCCAATACTTTGAT CGTCAAACATCGAAACAGAAATCTATTGATTCAGGAAAAAAAATATTTAT CAATTTTCATAATGGTAAGTACAAATAAGTTATATATGTAATAAATAGTA GGTATTTCCTTAATGCGGACTCAATCAACTCAGTCATTAATTAGACCGAG GGGGGGGGGGGGGGTGAGAAGMGGAATGGGTCCTTAATAGACTTAAAAAA ATAAATTGGAAAAGCTTTGTGAGGTTTTTTTACTGGCAAATACATCCTGA TAAGGAATAGCAGGGAAAGTRACATACACCTAGTACCATCCCATTCCACG CCCCCTGGCTTTCCTATAAGTGGTTTGACGTAAAATGTATGACTAAATCA TTTAAAATCTTCTAGGAGAGAGGAAGTATCCAATGGTTGCTGACAAACCG TCCTTTAATTCTTACAATCGGAGGMCAACCGATCCTGGATCTGAAGAAAA TGAGGAAGAAGAAAATACAGATTTTGGTTCGTCTCAAAAAGTCGCCAAAA TTGCTAGAGAAATAATGACCTCTGAGGAAGCTTATGTCAATAATCTAAAA CTACTAAATGTGGACTTCCGAGCCTTTGTATCAAAGGAAATTGATGATGC TATACCTCCTTGTGAACTAAATAAAATACTCAGCTACTTTCCAGAGCTTC AACTCTTGAATAGTGATCTCTTAAATGACTTTACTTCAAGGATTAGAAAC TGGGACTCTAATCCTAAAATTGCAGATATTATGGTCATCAAAGGAAAATT TCTTCTAATATATGCATCATACATAAAGGAATTCCCTCGTAATTCTCAAT TTTATCAAGAATGCTTAAAAAAATATCCTAAATTTAGAGAACTCGTGTTA GCTTTTCAACTAAAGAAAGAATGTCGTAACCTTAAAATTGAACATTTGAT GCTTGAACCCATACAAAGACTACCTCGTTATAAACTACTATTCGAAAGAT ATGTCAAAAATCTTCCAGTTGGTGATCCTGATTATGAAGTGTCTCTTGAA GCTTTAGAAATCATACTGAAGATTGCTGATAAAGCAAACACAGAACTGAA AGAATATGATGAGTTTAAAAAAATGTTAAATCTACAATCCAGAGTGAATG AATCTGATCTAATACAACCAGATAGGGAACTTTTCAAAGAAGGGGAATTA CTGAAGATTAGTAGAAACTCTGTGGATCCACGTTACATCGTTTTGCTTTC AGATATTCTGTTGTACACGKCTTCCTATTCGATATTAGCTGGTGARCCTG CCAATACTAATCTCAGGATTCATTACAAAATACCATTAATCAAACTTAAA GGTAAGAGTTTAAAGTTACAAAATAACTTCACCAATAATACATTTTACAA ATGCATAGTTGACGATCTGGCCGATGAAATCGACGCAGAAGAAACCGATT TTCAAATCATTTCATCAGTTCGAAGTTTTGTTCTTAGAGCAAATTCATTA GAAGAGAAAATAGAATGGATGAAGGCTATCAACGATGCAGCTACTTCCCT TAGAACCAAAAGATCTACGTTTGATCTTCAAAAGTCCAAAGAAATTCCTG AAGAAGAAGAAAAAGAAATCATTTTAGGAGAAACTGCCCCAGTGTGGATC CCGGACAAGAAAGTATCCATGTGCCAAAAATGTGCAATAGAATTTTCTGT ACTTACAAGACGGCATCATTGTCGGGGTTGTGGCATAGTGACTTGTTTTT ATTGTTCAGACAATCGTGCACCCCTTAAATACCTCAACTATAAATCTGAT CGAGTTTGCGATGAATGTTTTGACTCTATAAAAGAAGGTAAGCTCCATAA AAACAATCGATACTTTTTATGTTAAGACCCTAAGGAAGGGTGTGTTTTGC AAAATAAAAATTATTGATCCCTCTTTTTAGCAGTAATTATATTTTGTCAA TGTTTGATCTCTTTATTTTAATATTATCTATCTACATAATATGCCTTGGC CAAACGCAATAATATTTTGTATAAGTTTAATTACACACTTGTATAAAATT CCACTCATAATTGTGTTTTTTTCTTATTTTTCAAATTATTCTATTATATG TAGAATATTATTACCAAGATGCTAAGGCAAATAGTCAATATCTATCCTTG TTTCGGAAAAGAGAGGAACACAAATCTGGGTCTCTTCGCACGGTCCCAAA TCGTTTAAAAATGAAAGCTAATGCTGAAGGAGCWKAAGCCGCTGGCTATC TCAGAAAAAGAGTCGTCAAATCTGGAAAATGGAAAAAATCATGGTTTGTA TTAAAGGACAACGTTTTATATGCTTATAAAGCCTCCAGTGATACTGTAGC TATCGATACCTTTCCTGTTTTAGGATTAGAAGTTGAAGTCATATCGGAAA AGGTACAGTAMTAGTCATATTTTAGGCAACATTATACAGTATACATATAT ACAAATATAGCCATTAAATTAGTTTCTACCTCATATTTAAGTGTTTTTTT TTTTCCCCTTTTTATATATAGATCGAGGATCTCAATAATGAGCCTAATGG AAGTTCAGTAGTATTTCAGCTCATTCATGCTGGCCTTCAAAAATATTCAT TGTGCTTTAAAACAGAGAATGAACAACAACTTCAAAAATGGGTAAAAGCA TTACAAGAGGCATCAACTCTATCATAG
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