EMLSAT00000007853, EMLSAT00000007853-703700 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007853
Unique NameEMLSAT00000007853-703700
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s45supercontigLSalAtl2s45:896951..898458 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007853 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007853EMLSAG00000007853-690619Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034718EMLSAE00000034718-743646Lepeophtheirus salmonisexon
EMLSAE00000034719EMLSAE00000034719-743647Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780027auto780027Lepeophtheirus salmonispolypeptide
EMLSAP00000007853EMLSAP00000007853Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007853

>EMLSAP00000007853 ID=EMLSAP00000007853|Name=EMLSAP00000007853|organism=Lepeophtheirus salmonis|type=polypeptide|length=477bp
MAXPAGFSDSEDEFDDFVNPDDDVKHKDDNEYGFXSXKKXLFQNIQVPSF
KDLNSDVDGFRHALTEGDVPVVKKYLETHKVELRAPIVSASDNWSDMSPL
EIAATNGHITLLEYLLKESQNESKGDGPCLLTSISCSPGDKKPLVECAKL
LLPGEDVNRVEMTSGMTPLMYASKFGFIDLVKLFVSHGADVDYRDYNKWT
ALCHAANTGHGDVVRYLLVDAEASSNVTTTEGFQPSDISERKGHKYVTEV
FDTYSDYRSVFRGMMRNEDDANQHMLMILNGFALTKDEIDAFFREGVRDL
ATLITLTENDLSHKIGIKRVGVVNSISEFIKDMHRKEWKRSCLPKFQVYD
PSQGLKFSCPESIAVVGNIRKQLVYLRSSVIYLQRGIVENPKVLQIGKDV
GNVSDLYKFCKISASETEGLAMDLIKLKKTLYPYLNSKYMPVDEIKFDGM
LSKRTQWILTSLASLSIGVLIMRKCVS
back to top

mRNA from alignment at LSalAtl2s45:896951..898458+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007853-703700 ID=EMLSAT00000007853-703700|Name=EMLSAT00000007853|organism=Lepeophtheirus salmonis|type=mRNA|length=1508bp|location=Sequence derived from alignment at LSalAtl2s45:896951..898458+ (Lepeophtheirus salmonis)
ATGGCTCSYCCYGCCGGATTCTCAGACAGTGAAGACGAGTTCGATGACTT TGTGAATCCTGATGATGATGTCAAACACAAAGATGATAATGAATATGGCT TTAKAAGTMCGAAAAAGKATCTTTTTCAAAATATTCAAGTCCCTTCCTTC GTAAGTCGCTTATGAATCATAAAATTGTTAATAACATTTTCCCCCCCCCC CCCACTTTGAATCCATTTTCGTAGAAGGATCTAAACTCGGACGTAGATGG TTTCCGACATGCCCTCACGGAGGGTGATGTTCCTGTGGTCAAAAAGTATT TAGAGACCCATAAAGTGGAACTGAGGGCTCCAATTGTCTCTGCATCGGAT AATTGGTCCGATATGAGTCCTTTAGAAATTGCAGCTACAAATGGCCATAT CACACTGCTCGAATATTTGTTGAAAGAATCCCAAAATGAGAGCAAAGGAG ATGGTCCATGCCTGTTAACTTCTATTTCCTGCTCACCAGGTGATAAAAAA CCACTAGTTGAATGTGCCAAGTTACTCTTGCCAGGAGAGGACGTAAACCG TGTCGAAATGACGAGTGGAATGACTCCACTTATGTATGCCTCAAAGTTTG GCTTTATAGACTTAGTCAAACTCTTTGTGTCCCATGGTGCTGACGTAGAT TATCGAGATTACAACAAGTGGACGGCTCTTTGTCATGCTGCCAATACGGG TCATGGCGACGTTGTACGTTACTTGTTGGTGGATGCTGAGGCTTCTAGTA ATGTTACGACTACTGAGGGRTTTCAACCCTCGGATATTTCAGAAAGAAAG GGGCATAAATACGTTACTGAAGTATTTGATACCTACTCCGATTATCGCTC TGTTTTTAGAGGGATGATGCGGAACGAGGACGATGCCAATCAACATATGC TTATGATACTCAATGGATTTGCCTTGACCAAGGATGAGATTGATGCCTTT TTTCGTGAAGGAGTGCGAGATTTGGCAACTTTAATTACGCTTACTGAGAA TGACTTAAGCCACAAAATAGGAATTAAGCGAGTTGGAGTCGTTAATTCAA TTTCTGAATTTATTAAAGACATGCACCGCAAGGAATGGAAACGCTCCTGT CTCCCTAAATTTCAGGTATATGACCCTTCTCAGGGCCTTAAGTTCTCATG TCCAGAGTCGATTGCTGTGGTTGGGAATATACGGAAGCAGTTGGTGTATT TGCGAAGTTCTGTAATTTATCTTCAGCGTGGCATTGTAGAGAATCCCAAG GTTCTGCAAATTGGTAAAGACGTTGGGAATGTGTCTGATTTGTACAAATT CTGTAAAATAAGTGCGTCTGAAACGGAGGGACTGGCCATGGATCTGATTA AGTTGAAGAAAACTTTATATCCATATTTAAATAGTAAATATATGCCAGTT GACGAAATTAAATTTGATGGGATGTTATCAAAGAGGACGCAATGGATCCT CACGTCATTAGCTTCATTATCAATAGGTGTATTAATCATGAGAAAATGTG TCTCATAA
back to top
Add to Basket