EMLSAT00000007855, EMLSAT00000007855-703702 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007855
Unique NameEMLSAT00000007855-703702
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s45supercontigLSalAtl2s45:901891..902519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007855 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007855EMLSAG00000007855-690621Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034728EMLSAE00000034728-743656Lepeophtheirus salmonisexon
EMLSAE00000034729EMLSAE00000034729-743657Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780038auto780038Lepeophtheirus salmonispolypeptide
EMLSAP00000007855EMLSAP00000007855Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007855

>EMLSAP00000007855 ID=EMLSAP00000007855|Name=EMLSAP00000007855|organism=Lepeophtheirus salmonis|type=polypeptide|length=179bp
MRPRFNALQRAKITFLSLFYNHFLSPSYVFDVLMEPILWIVDHFTKALGP
IFVIALILLNISVIFVAYRVGLPFYWKRSPPFAIFLVILGQYFKFNVMFY
YYKAYTTPPGAPPLDSPPPNIASICKKCVYPKPPRTHHCSVCNVCVLKMD
HHCPWLNSCVGHYNHRYFFLYMVFTVLGT
back to top

mRNA from alignment at LSalAtl2s45:901891..902519+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007855-703702 ID=EMLSAT00000007855-703702|Name=EMLSAT00000007855|organism=Lepeophtheirus salmonis|type=mRNA|length=629bp|location=Sequence derived from alignment at LSalAtl2s45:901891..902519+ (Lepeophtheirus salmonis)
ATGAGGCCCCGATTCAATGCCCTTCAAAGGGCAAAAATTACATTCCTCTC
TCTCTTCTATAATCATTTCCTCTCGCCTTCCTATGTCTTCGACGTATTAA
TGGAGCCCATTTTATGGATTGTCGACCATTTCACCAAAGCATTAGGACCC
ATTTTTGTTATAGCGCTCATTTTACTTAATATATCCGTCATTTTTGTGGC
ATATCGTGTTGGACTCCCCTTCTACTGGAAACGGAGTCCGCCTTTTGCAA
TTTTCCTTGTCATTTTAGGTATTATATCCATTTAATTATAAATAAAACTC
CTAATTCTATTTTTGAAAACACAAAGACTCTCAAAATCAATTTTATGCAC
TATTTAGGACAGTATTTCAAATTCAATGTGATGTTCTACTACTACAAAGC
CTATACAACGCCCCCGGGTGCACCTCCCCTGGACTCTCCTCCTCCAAACA
TTGCATCCATCTGCAAAAAATGTGTGTATCCCAAGCCACCTCGTACACAT
CATTGCTCAGTTTGTAATGTCTGCGTTCTCAAAATGGACCATCACTGTCC
ATGGCTCAATAGCTGTGTGGGGCACTATAATCATCGCTACTTCTTTCTAT
ATATGGTGTTTACAGTCCTGGGTACGTAG
back to top
Add to Basket